RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 USP9XQ93008 2570 aaPredicted RBP8.34□□□□□ -1.07
SPG11-203ENST00000535302 ZNF462Q96JM2 2506 aa8.34□□□□□ -1.08
SPG11-203ENST00000535302 IGLV1-50A0A075B6I6 118 aa8.33□□□□□ -1.08
SPG11-203ENST00000535302 LOC101927531A0A1B0GV80 90 aa8.32□□□□□ -1.08
SPG11-203ENST00000535302 IGLV5-48A0A075B6I7 105 aa8.32□□□□□ -1.08
SPG11-203ENST00000535302 DNAH12Q6ZR08 3092 aa8.3□□□□□ -1.08
SPG11-203ENST00000535302 C8orf17Q9NRJ1 99 aa8.3□□□□□ -1.08
SPG11-203ENST00000535302 CASC10Q5T4H9 136 aa8.29□□□□□ -1.08
SPG11-203ENST00000535302 H3BPC8 53 aa8.28□□□□□ -1.08
SPG11-203ENST00000535302 PRR15Q8IV56 129 aa8.28□□□□□ -1.08
SPG11-203ENST00000535302 CHD8Q9HCK8 2581 aa8.27□□□□□ -1.09
SPG11-203ENST00000535302 POLQO75417 2590 aa8.27□□□□□ -1.09
SPG11-203ENST00000535302 WIPF1O43516 503 aa8.26□□□□□ -1.09
SPG11-203ENST00000535302 GIG44P09565 113 aaPredicted RBP8.26□□□□□ -1.09
SPG11-203ENST00000535302 RBM12B-AS1Q9P1G2 102 aa8.26□□□□□ -1.09
SPG11-203ENST00000535302 M0R2T5 61 aa8.25□□□□□ -1.09
SPG11-203ENST00000535302 SPTBN4Q9H254 2564 aa8.24□□□□□ -1.09
SPG11-203ENST00000535302 A0A1B0GVX0 72 aa8.24□□□□□ -1.09
SPG11-203ENST00000535302 Q8N377 158 aa8.24□□□□□ -1.09
SPG11-203ENST00000535302 KCNQ1DNQ9H478 68 aa8.23□□□□□ -1.09
SPG11-203ENST00000535302 BPTFQ12830 3046 aa8.23□□□□□ -1.09
SPG11-203ENST00000535302 ANKRD17O75179 2603 aaKnown RBP8.23□□□□□ -1.09
SPG11-203ENST00000535302 C19orf73Q9NVV2 129 aa8.22□□□□□ -1.09
SPG11-203ENST00000535302 A0A087WTM6 91 aa8.22□□□□□ -1.09
SPG11-203ENST00000535302 ZNF861PO60384 105 aa8.22□□□□□ -1.09
SPG11-203ENST00000535302 LINC00528Q8N1L1 170 aa8.21□□□□□ -1.09
SPG11-203ENST00000535302 CR1P17927 2039 aa8.21□□□□□ -1.1
SPG11-203ENST00000535302 A0A096LNT2 108 aa8.21□□□□□ -1.1
SPG11-203ENST00000535302 USP9YO00507 2555 aaPredicted RBP8.2□□□□□ -1.1
SPG11-203ENST00000535302 RPS28P62857 69 aaKnown RBP8.2□□□□□ -1.1
SPG11-203ENST00000535302 PKD1L2Q7Z442 2459 aa8.2□□□□□ -1.1
SPG11-203ENST00000535302 A0A1B0GW54 56 aa8.2□□□□□ -1.1
SPG11-203ENST00000535302 CDC42SE1Q9NRR8 79 aa8.2□□□□□ -1.1
SPG11-203ENST00000535302 ERC2-IT1O76042 136 aa8.19□□□□□ -1.1
SPG11-203ENST00000535302 C5orf42Q9H799 3197 aa8.18□□□□□ -1.1
SPG11-203ENST00000535302 PSORS1C2Q9UIG4 136 aa8.18□□□□□ -1.1
SPG11-203ENST00000535302 LINC00336Q6ZUF6 198 aa8.17□□□□□ -1.1
SPG11-203ENST00000535302 MTORP42345 2549 aa8.17□□□□□ -1.1
SPG11-203ENST00000535302 KLK9Q2XQG4 91 aa8.17□□□□□ -1.1
SPG11-203ENST00000535302 PRR34Q9NV39 138 aa8.17□□□□□ -1.1
SPG11-203ENST00000535302 LUZP6Q538Z0 58 aa8.16□□□□□ -1.1
SPG11-203ENST00000535302 CAMK2N1Q7Z7J9 78 aa8.14□□□□□ -1.11
SPG11-203ENST00000535302 FAM104AQ969W3 186 aa8.14□□□□□ -1.11
SPG11-203ENST00000535302 CYP4F30PQ9H0H9 118 aa8.14□□□□□ -1.11
SPG11-203ENST00000535302 IGLV7-43P04211 117 aa8.14□□□□□ -1.11
SPG11-203ENST00000535302 PCNTO95613 3336 aa8.11□□□□□ -1.11
SPG11-203ENST00000535302 KRTAP1-3Q8IUG1 177 aa8.11□□□□□ -1.11
SPG11-203ENST00000535302 PRR26Q8N8Z3 221 aa8.11□□□□□ -1.11
SPG11-203ENST00000535302 CEP350Q5VT06 3117 aa8.1□□□□□ -1.11
SPG11-203ENST00000535302 Q6ZSA8 131 aa8.09□□□□□ -1.11
SPG11-203ENST00000535302 C9orf163Q8N9P6 203 aa8.09□□□□□ -1.11
SPG11-203ENST00000535302 CD164Q04900 197 aa8.09□□□□□ -1.11
SPG11-203ENST00000535302 PLA2G2DQ9UNK4 145 aa8.09□□□□□ -1.11
SPG11-203ENST00000535302 KTN1-AS1Q86SY8 53 aa8.08□□□□□ -1.12
SPG11-203ENST00000535302 LINC00612Q8N6U2 182 aa8.06□□□□□ -1.12
SPG11-203ENST00000535302 FASNP49327 2511 aaKnown RBP8.05□□□□□ -1.12
SPG11-203ENST00000535302 H7BZZ5 65 aa8.05□□□□□ -1.12
SPG11-203ENST00000535302 KRTAP1-1Q07627 177 aa8.05□□□□□ -1.12
SPG11-203ENST00000535302 SPRR4Q96PI1 79 aa8.05□□□□□ -1.12
SPG11-203ENST00000535302 LCA10Q71F78 164 aa8.05□□□□□ -1.12
SPG11-203ENST00000535302 A0A1W2PNM2 257 aa8.03□□□□□ -1.12
SPG11-203ENST00000535302 TNP2Q05952 138 aa8.03□□□□□ -1.12
SPG11-203ENST00000535302 TLX1NBP0CAT3 122 aa8.03□□□□□ -1.12
SPG11-203ENST00000535302 IGLV7-46A0A075B6I9 117 aa8□□□□□ -1.13
SPG11-203ENST00000535302 LINC00483Q53H64 154 aa7.98□□□□□ -1.13
SPG11-203ENST00000535302 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.97□□□□□ -1.13
SPG11-203ENST00000535302 KLKP1Q107X0 134 aa7.97□□□□□ -1.13
SPG11-203ENST00000535302 USP24Q9UPU5 2620 aa7.97□□□□□ -1.13
SPG11-203ENST00000535302 CNBPP62633 177 aaKnown RBP7.96□□□□□ -1.13
SPG11-203ENST00000535302 PRAC1Q96KF2 57 aa7.95□□□□□ -1.14
SPG11-203ENST00000535302 Q1T7F1 81 aa7.95□□□□□ -1.14
SPG11-203ENST00000535302 A0A1B0GU33 70 aa7.94□□□□□ -1.14
SPG11-203ENST00000535302 PRRC2CQ9Y520 2896 aaKnown RBP7.92□□□□□ -1.14
SPG11-203ENST00000535302 XIRP2A4UGR9 3374 aa7.91□□□□□ -1.14
SPG11-203ENST00000535302 FAM229BQ4G0N7 80 aa7.91□□□□□ -1.14
SPG11-203ENST00000535302 S4R3F8 94 aa7.9□□□□□ -1.14
SPG11-203ENST00000535302 HRES1P13985 223 aa7.9□□□□□ -1.15
SPG11-203ENST00000535302 HECTD1Q9ULT8 2610 aa7.89□□□□□ -1.15
SPG11-203ENST00000535302 CFAP54Q96N23 3096 aa7.86□□□□□ -1.15
SPG11-203ENST00000535302 Q8N9P0 234 aaPredicted RBP7.85□□□□□ -1.15
SPG11-203ENST00000535302 CSAG1Q6PB30 78 aa7.84□□□□□ -1.16
SPG11-203ENST00000535302 H3BS24 57 aa7.83□□□□□ -1.16
SPG11-203ENST00000535302 EPG5Q9HCE0 2579 aa7.82□□□□□ -1.16
SPG11-203ENST00000535302 SPANXA2-OT1Q8N9U9 137 aa7.81□□□□□ -1.16
SPG11-203ENST00000535302 Q8NDZ9 215 aa7.81□□□□□ -1.16
SPG11-203ENST00000535302 SPINK7P58062 85 aa7.8□□□□□ -1.16
SPG11-203ENST00000535302 FLG2Q5D862 2391 aaPredicted RBP7.79□□□□□ -1.16
SPG11-203ENST00000535302 MKI67P46013 3256 aaKnown RBP7.79□□□□□ -1.16
SPG11-203ENST00000535302 R4GN34 69 aa7.78□□□□□ -1.16
SPG11-203ENST00000535302 FREM2Q5SZK8 3169 aa7.78□□□□□ -1.16
SPG11-203ENST00000535302 OCR1Q9BZK8 76 aa7.77□□□□□ -1.17
SPG11-203ENST00000535302 CELSR3Q9NYQ7 3312 aa7.77□□□□□ -1.17
SPG11-203ENST00000535302 MGAM2Q2M2H8 2515 aa7.77□□□□□ -1.17
SPG11-203ENST00000535302 CHD7Q9P2D1 2997 aa7.77□□□□□ -1.17
SPG11-203ENST00000535302 LAMA2P24043 3122 aaKnown RBP7.74□□□□□ -1.17
SPG11-203ENST00000535302 ZCCHC13Q8WW36 166 aaKnown RBP7.73□□□□□ -1.17
SPG11-203ENST00000535302 FLNBO75369 2602 aaKnown RBP7.72□□□□□ -1.17
SPG11-203ENST00000535302 Q5VSD8 79 aa7.71□□□□□ -1.17
SPG11-203ENST00000535302 BRCA2P51587 3418 aa7.71□□□□□ -1.18
SPG11-203ENST00000535302 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms