RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 NSD1Q96L73 2696 aaPredicted RBP12.78□□□□□ -0.36
SMPD1-210ENST00000534405 ZCCHC13Q8WW36 166 aaKnown RBP12.78□□□□□ -0.36
SMPD1-210ENST00000534405 SYCNQ0VAF6 134 aa12.77□□□□□ -0.37
SMPD1-210ENST00000534405 CHCHD10Q8WYQ3 142 aaPredicted RBP12.77□□□□□ -0.37
SMPD1-210ENST00000534405 KTN1-AS1Q86SY8 53 aa12.77□□□□□ -0.37
SMPD1-210ENST00000534405 CYP4F30PQ9H0H9 118 aa12.77□□□□□ -0.37
SMPD1-210ENST00000534405 ANGP03950 147 aaKnown RBP12.76□□□□□ -0.37
SMPD1-210ENST00000534405 C9orf116Q5BN46 136 aaPredicted RBP12.76□□□□□ -0.37
SMPD1-210ENST00000534405 REG3AQ06141 175 aa12.76□□□□□ -0.37
SMPD1-210ENST00000534405 TRRAPQ9Y4A5 3859 aa12.76□□□□□ -0.37
SMPD1-210ENST00000534405 Q8NAQ8 132 aa12.75□□□□□ -0.37
SMPD1-210ENST00000534405 UBE2BP63146 152 aa12.74□□□□□ -0.37
SMPD1-210ENST00000534405 RBM12B-AS1Q9P1G2 102 aa12.74□□□□□ -0.37
SMPD1-210ENST00000534405 LINC00588Q9Y4M8 146 aa12.74□□□□□ -0.37
SMPD1-210ENST00000534405 PSCAO43653 123 aa12.74□□□□□ -0.37
SMPD1-210ENST00000534405 APOC4P55056 127 aa12.73□□□□□ -0.37
SMPD1-210ENST00000534405 FAM30AQ9NZY2 134 aa12.73□□□□□ -0.37
SMPD1-210ENST00000534405 A8MUN3 132 aa12.73□□□□□ -0.37
SMPD1-210ENST00000534405 ATRQ13535 2644 aa12.73□□□□□ -0.37
SMPD1-210ENST00000534405 SMIM29Q86T20 159 aa12.72□□□□□ -0.37
SMPD1-210ENST00000534405 DIRC1Q969H9 104 aa12.72□□□□□ -0.37
SMPD1-210ENST00000534405 A8MU10 97 aa12.71□□□□□ -0.38
SMPD1-210ENST00000534405 IGHV4-30-4P0DP06 118 aa12.71□□□□□ -0.38
SMPD1-210ENST00000534405 HTN3P15516 51 aa12.7□□□□□ -0.38
SMPD1-210ENST00000534405 Q5VV11 94 aa12.7□□□□□ -0.38
SMPD1-210ENST00000534405 C10orf25Q5T742 122 aa12.69□□□□□ -0.38
SMPD1-210ENST00000534405 ELOF1P60002 83 aaKnown RBP12.67□□□□□ -0.38
SMPD1-210ENST00000534405 TEP1Q99973 2627 aaKnown RBP12.66□□□□□ -0.38
SMPD1-210ENST00000534405 HIVEP1P15822 2718 aa12.66□□□□□ -0.38
SMPD1-210ENST00000534405 SPART-AS1P0CW21 52 aa12.65□□□□□ -0.38
SMPD1-210ENST00000534405 UBE2AP49459 152 aa12.65□□□□□ -0.38
SMPD1-210ENST00000534405 HIGD2BQ4VC39 106 aa12.65□□□□□ -0.38
SMPD1-210ENST00000534405 UNQ6190/PRO20217Q6UXQ8 127 aa12.64□□□□□ -0.39
SMPD1-210ENST00000534405 KLK12Q9UKR0 248 aa12.64□□□□□ -0.39
SMPD1-210ENST00000534405 M0R378 163 aa12.64□□□□□ -0.39
SMPD1-210ENST00000534405 ZNF73O43830 326 aaPredicted RBP12.64□□□□□ -0.39
SMPD1-210ENST00000534405 LELP1Q5T871 98 aa12.64□□□□□ -0.39
SMPD1-210ENST00000534405 SPAG11BQ08648 103 aa12.62□□□□□ -0.39
SMPD1-210ENST00000534405 C16orf90A8MZG2 172 aa12.61□□□□□ -0.39
SMPD1-210ENST00000534405 ETDCA0A1B0GVM5 59 aa12.61□□□□□ -0.39
SMPD1-210ENST00000534405 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.6□□□□□ -0.39
SMPD1-210ENST00000534405 PRR34Q9NV39 138 aa12.6□□□□□ -0.39
SMPD1-210ENST00000534405 C3orf84H3BNL1 204 aa12.6□□□□□ -0.39
SMPD1-210ENST00000534405 NDUFS5O43920 106 aa12.6□□□□□ -0.39
SMPD1-210ENST00000534405 CYSRT1A8MQ03 144 aa12.59□□□□□ -0.39
SMPD1-210ENST00000534405 A0A0J9YWU9 116 aa12.59□□□□□ -0.39
SMPD1-210ENST00000534405 PRR4Q16378 134 aa12.57□□□□□ -0.4
SMPD1-210ENST00000534405 ATP11AUNQ6ZP68 121 aa12.57□□□□□ -0.4
SMPD1-210ENST00000534405 CHKB-CPT1BH3BT56 60 aa12.56□□□□□ -0.4
SMPD1-210ENST00000534405 PHF5AQ7RTV0 110 aaKnown RBP12.56□□□□□ -0.4
SMPD1-210ENST00000534405 NDUFB1O75438 58 aa12.56□□□□□ -0.4
SMPD1-210ENST00000534405 LIMD2Q9BT23 127 aa12.55□□□□□ -0.4
SMPD1-210ENST00000534405 Q8N9P0 234 aaPredicted RBP12.53□□□□□ -0.4
SMPD1-210ENST00000534405 A0A1B0GW54 56 aa12.52□□□□□ -0.4
SMPD1-210ENST00000534405 A6NN06 94 aa12.52□□□□□ -0.4
SMPD1-210ENST00000534405 LINC00528Q8N1L1 170 aa12.52□□□□□ -0.4
SMPD1-210ENST00000534405 HCG22E2RYF7 251 aa12.52□□□□□ -0.41
SMPD1-210ENST00000534405 ST20-AS1Q8NBB2 130 aa12.51□□□□□ -0.41
SMPD1-210ENST00000534405 OXLD1Q5BKU9 147 aa12.51□□□□□ -0.41
SMPD1-210ENST00000534405 C6orf48Q9UBA6 75 aa12.51□□□□□ -0.41
SMPD1-210ENST00000534405 WFDC10BQ8IUB3 73 aa12.5□□□□□ -0.41
SMPD1-210ENST00000534405 SPTSSBQ8NFR3 76 aa12.5□□□□□ -0.41
SMPD1-210ENST00000534405 B9D2Q9BPU9 175 aa12.49□□□□□ -0.41
SMPD1-210ENST00000534405 GVQW2A0A096LPI5 108 aaPredicted RBP12.49□□□□□ -0.41
SMPD1-210ENST00000534405 LCA10Q71F78 164 aa12.49□□□□□ -0.41
SMPD1-210ENST00000534405 C4orf48Q5BLP8 95 aa12.48□□□□□ -0.41
SMPD1-210ENST00000534405 XAGE1AQ9HD64 81 aa12.48□□□□□ -0.41
SMPD1-210ENST00000534405 KRTAP10-11P60412 298 aa12.48□□□□□ -0.41
SMPD1-210ENST00000534405 PKD1L1Q8TDX9 2849 aa12.47□□□□□ -0.41
SMPD1-210ENST00000534405 IGLV5-48A0A075B6I7 105 aa12.47□□□□□ -0.41
SMPD1-210ENST00000534405 KPRPQ5T749 579 aaPredicted RBP12.47□□□□□ -0.41
SMPD1-210ENST00000534405 PRB2P02812 416 aaPredicted RBP12.46□□□□□ -0.42
SMPD1-210ENST00000534405 PRR15LQ9BU68 103 aa12.46□□□□□ -0.42
SMPD1-210ENST00000534405 Q75L30 129 aa12.45□□□□□ -0.42
SMPD1-210ENST00000534405 KRTAP26-1Q6PEX3 210 aa12.45□□□□□ -0.42
SMPD1-210ENST00000534405 DSCR10P59022 87 aa12.44□□□□□ -0.42
SMPD1-210ENST00000534405 ANK2Q01484 3957 aa12.43□□□□□ -0.42
SMPD1-210ENST00000534405 VPREB1P12018 145 aa12.43□□□□□ -0.42
SMPD1-210ENST00000534405 Q9BRP9 147 aa12.43□□□□□ -0.42
SMPD1-210ENST00000534405 TENM3Q9P273 2699 aa12.42□□□□□ -0.42
SMPD1-210ENST00000534405 C11orf45Q8TAV5 145 aa12.42□□□□□ -0.42
SMPD1-210ENST00000534405 LINC00208Q96KT6 92 aa12.42□□□□□ -0.42
SMPD1-210ENST00000534405 SPANXA2-OT1Q8N9U9 137 aa12.41□□□□□ -0.42
SMPD1-210ENST00000534405 A0A1W2PNM2 257 aa12.4□□□□□ -0.42
SMPD1-210ENST00000534405 K7EQZ3 153 aa12.4□□□□□ -0.42
SMPD1-210ENST00000534405 C7orf65Q6ZTY9 151 aa12.4□□□□□ -0.42
SMPD1-210ENST00000534405 H3BNG1 76 aa12.4□□□□□ -0.42
SMPD1-210ENST00000534405 KCNQ1DNQ9H478 68 aa12.4□□□□□ -0.42
SMPD1-210ENST00000534405 LOC101927531A0A1B0GV80 90 aa12.39□□□□□ -0.43
SMPD1-210ENST00000534405 CAMK2N2Q96S95 79 aa12.39□□□□□ -0.43
SMPD1-210ENST00000534405 Q8N377 158 aa12.39□□□□□ -0.43
SMPD1-210ENST00000534405 C15orf56Q8N910 161 aa12.38□□□□□ -0.43
SMPD1-210ENST00000534405 F8P00451 2351 aa12.37□□□□□ -0.43
SMPD1-210ENST00000534405 A6NED7 52 aa12.37□□□□□ -0.43
SMPD1-210ENST00000534405 MP68P56378 58 aa12.37□□□□□ -0.43
SMPD1-210ENST00000534405 CDC42SE1Q9NRR8 79 aa12.37□□□□□ -0.43
SMPD1-210ENST00000534405 Q8NBF4 154 aa12.34□□□□□ -0.43
SMPD1-210ENST00000534405 SPRR4Q96PI1 79 aa12.33□□□□□ -0.43
SMPD1-210ENST00000534405 EGFEM1PQ0D2K5 195 aa12.33□□□□□ -0.44
SMPD1-210ENST00000534405 DEFB105AQ8NG35 78 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms