RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 SMCR5Q8TEV8 140 aa12.53□□□□□ -0.4
PKP3-211ENST00000534401 SPRR4Q96PI1 79 aa12.53□□□□□ -0.4
PKP3-211ENST00000534401 PCP2Q8IVA1 136 aa12.52□□□□□ -0.41
PKP3-211ENST00000534401 TYMSOSQ8TAI1 123 aa12.52□□□□□ -0.41
PKP3-211ENST00000534401 S100A7L2Q5SY68 101 aa12.51□□□□□ -0.41
PKP3-211ENST00000534401 LRP2P98164 4655 aa12.5□□□□□ -0.41
PKP3-211ENST00000534401 Q6ZVH6 145 aa12.49□□□□□ -0.41
PKP3-211ENST00000534401 TRAV23DV6A0A075B6W5 121 aa12.48□□□□□ -0.41
PKP3-211ENST00000534401 IFITM1P13164 125 aa12.48□□□□□ -0.41
PKP3-211ENST00000534401 SCGB1D4Q6XE38 83 aa12.48□□□□□ -0.41
PKP3-211ENST00000534401 Q6ZRX8 168 aa12.48□□□□□ -0.41
PKP3-211ENST00000534401 Q9BRP9 147 aa12.48□□□□□ -0.41
PKP3-211ENST00000534401 ZNF706Q9Y5V0 76 aaPredicted RBP12.48□□□□□ -0.41
PKP3-211ENST00000534401 LINC00518Q8N0U6 118 aa12.47□□□□□ -0.41
PKP3-211ENST00000534401 CBY1Q9Y3M2 126 aa12.47□□□□□ -0.41
PKP3-211ENST00000534401 ZNF73O43830 326 aaPredicted RBP12.46□□□□□ -0.41
PKP3-211ENST00000534401 ERC2-IT1O76042 136 aa12.45□□□□□ -0.42
PKP3-211ENST00000534401 CTAG1AP78358 180 aa12.45□□□□□ -0.42
PKP3-211ENST00000534401 LINC00483Q53H64 154 aa12.45□□□□□ -0.42
PKP3-211ENST00000534401 COPS9Q8WXC6 57 aa12.43□□□□□ -0.42
PKP3-211ENST00000534401 C3orf22Q8N5N4 141 aa12.42□□□□□ -0.42
PKP3-211ENST00000534401 JOSD1Q15040 202 aaPredicted RBP12.4□□□□□ -0.42
PKP3-211ENST00000534401 MUSTN1Q8IVN3 82 aa12.4□□□□□ -0.42
PKP3-211ENST00000534401 HSBP1L1C9JCN9 74 aa12.39□□□□□ -0.43
PKP3-211ENST00000534401 LINC00304Q8N9R0 145 aa12.39□□□□□ -0.43
PKP3-211ENST00000534401 OR13C6PQ8NH95 151 aa12.39□□□□□ -0.43
PKP3-211ENST00000534401 TSPAN13O95857 204 aa12.36□□□□□ -0.43
PKP3-211ENST00000534401 SCGB1D1O95968 90 aa12.36□□□□□ -0.43
PKP3-211ENST00000534401 HINT1P49773 126 aaPredicted RBP12.34□□□□□ -0.43
PKP3-211ENST00000534401 TRBV7-6A0A0J9YX20 115 aa12.33□□□□□ -0.44
PKP3-211ENST00000534401 GAGE2AQ6NT46 116 aa12.33□□□□□ -0.44
PKP3-211ENST00000534401 ELOF1P60002 83 aaKnown RBP12.32□□□□□ -0.44
PKP3-211ENST00000534401 C6orf99Q4VX62 202 aa12.31□□□□□ -0.44
PKP3-211ENST00000534401 SPAG11AQ6PDA7 123 aa12.31□□□□□ -0.44
PKP3-211ENST00000534401 DHRS4-AS1Q9P1J3 65 aa12.31□□□□□ -0.44
PKP3-211ENST00000534401 RNF213Q63HN8 5207 aa12.31□□□□□ -0.44
PKP3-211ENST00000534401 DLEU1O43261 78 aa12.3□□□□□ -0.44
PKP3-211ENST00000534401 COX8AP10176 69 aa12.3□□□□□ -0.44
PKP3-211ENST00000534401 LPAP08519 4548 aa12.3□□□□□ -0.44
PKP3-211ENST00000534401 SPRR1BP22528 89 aa12.29□□□□□ -0.44
PKP3-211ENST00000534401 COX7BP24311 80 aa12.28□□□□□ -0.44
PKP3-211ENST00000534401 SSBP3-AS1Q7Z2R9 100 aa12.28□□□□□ -0.44
PKP3-211ENST00000534401 TRAV13-2A0A0B4J235 113 aa12.27□□□□□ -0.45
PKP3-211ENST00000534401 PRR4Q16378 134 aa12.27□□□□□ -0.45
PKP3-211ENST00000534401 ST20-AS1Q8NBB2 130 aa12.27□□□□□ -0.45
PKP3-211ENST00000534401 Q8NBF4 154 aa12.26□□□□□ -0.45
PKP3-211ENST00000534401 A6NDN8 102 aa12.25□□□□□ -0.45
PKP3-211ENST00000534401 A0A1B0GWB2 263 aa12.24□□□□□ -0.45
PKP3-211ENST00000534401 A4D1N5 150 aa12.23□□□□□ -0.45
PKP3-211ENST00000534401 SMIM11BQ8TCY0 68 aa12.22□□□□□ -0.45
PKP3-211ENST00000534401 MOBPQ13875 183 aa12.21□□□□□ -0.45
PKP3-211ENST00000534401 SPINK1P00995 79 aa12.2□□□□□ -0.46
PKP3-211ENST00000534401 HIGD1BQ9P298 99 aa12.2□□□□□ -0.46
PKP3-211ENST00000534401 IGLV9-49A0A0B4J1Y8 123 aa12.19□□□□□ -0.46
PKP3-211ENST00000534401 C4orf48Q5BLP8 95 aa12.19□□□□□ -0.46
PKP3-211ENST00000534401 RPS29P62273 56 aaKnown RBP12.18□□□□□ -0.46
PKP3-211ENST00000534401 SPATA45Q537H7 98 aa12.18□□□□□ -0.46
PKP3-211ENST00000534401 C14orf144Q96I85 54 aa12.18□□□□□ -0.46
PKP3-211ENST00000534401 PAM16Q9Y3D7 125 aa12.18□□□□□ -0.46
PKP3-211ENST00000534401 HIST1H4GQ99525 98 aa12.17□□□□□ -0.46
PKP3-211ENST00000534401 RETNLBQ9BQ08 111 aa12.17□□□□□ -0.46
PKP3-211ENST00000534401 VAMP8Q9BV40 100 aa12.17□□□□□ -0.46
PKP3-211ENST00000534401 LINC01547P58512 204 aaPredicted RBP12.16□□□□□ -0.46
PKP3-211ENST00000534401 IGLV5-48A0A075B6I7 105 aa12.15□□□□□ -0.46
PKP3-211ENST00000534401 SLC25A34Q6PIV7 304 aa12.15□□□□□ -0.46
PKP3-211ENST00000534401 C2orf91Q6ZV80 131 aa12.14□□□□□ -0.47
PKP3-211ENST00000534401 PYY3Q5JQD4 70 aa12.13□□□□□ -0.47
PKP3-211ENST00000534401 TEX49A0A1B0GTD5 131 aa12.12□□□□□ -0.47
PKP3-211ENST00000534401 TPRXLQ17RH7 258 aa12.11□□□□□ -0.47
PKP3-211ENST00000534401 FP248Q71RG6 208 aaPredicted RBP12.11□□□□□ -0.47
PKP3-211ENST00000534401 SMIM29Q86T20 159 aa12.11□□□□□ -0.47
PKP3-211ENST00000534401 IGLV7-46A0A075B6I9 117 aa12.1□□□□□ -0.47
PKP3-211ENST00000534401 TAL2Q16559 108 aa12.1□□□□□ -0.47
PKP3-211ENST00000534401 NHP2Q9NX24 153 aaKnown RBP12.1□□□□□ -0.47
PKP3-211ENST00000534401 LAMTOR3Q9UHA4 124 aa12.1□□□□□ -0.47
PKP3-211ENST00000534401 C9orf153Q5TBE3 101 aa12.09□□□□□ -0.47
PKP3-211ENST00000534401 LINC00575Q6W349 94 aa12.09□□□□□ -0.47
PKP3-211ENST00000534401 Q8N377 158 aa12.09□□□□□ -0.47
PKP3-211ENST00000534401 VAMP3Q15836 100 aa12.08□□□□□ -0.48
PKP3-211ENST00000534401 CFC1BP0CG36 223 aa12.07□□□□□ -0.48
PKP3-211ENST00000534401 CFC1P0CG37 223 aa12.07□□□□□ -0.48
PKP3-211ENST00000534401 DEFB105AQ8NG35 78 aa12.05□□□□□ -0.48
PKP3-211ENST00000534401 C12orf57Q99622 126 aa12.05□□□□□ -0.48
PKP3-211ENST00000534401 A0A0B4J2C4 111 aa12.03□□□□□ -0.48
PKP3-211ENST00000534401 TMA7Q9Y2S6 64 aaKnown RBP12.03□□□□□ -0.48
PKP3-211ENST00000534401 SLC25A20O43772 301 aa12.02□□□□□ -0.49
PKP3-211ENST00000534401 Q1RN00 199 aa12.02□□□□□ -0.49
PKP3-211ENST00000534401 CD164Q04900 197 aa12.01□□□□□ -0.49
PKP3-211ENST00000534401 CEND1Q8N111 149 aa12.01□□□□□ -0.49
PKP3-211ENST00000534401 hADV29S1A0JD25 119 aa12□□□□□ -0.49
PKP3-211ENST00000534401 BVES-AS1Q5T3Y7 98 aa12□□□□□ -0.49
PKP3-211ENST00000534401 PRO1933Q9H354 126 aa11.99□□□□□ -0.49
PKP3-211ENST00000534401 KRTAP13-3Q3SY46 172 aa11.98□□□□□ -0.49
PKP3-211ENST00000534401 Q6ZQY7 126 aa11.96□□□□□ -0.49
PKP3-211ENST00000534401 RAB37Q96AX2 223 aa11.96□□□□□ -0.49
PKP3-211ENST00000534401 FXYD2P54710 66 aa11.95□□□□□ -0.5
PKP3-211ENST00000534401 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.95□□□□□ -0.5
PKP3-211ENST00000534401 Q5XG85 94 aa11.94□□□□□ -0.5
PKP3-211ENST00000534401 TMEM238LA0A1B0GVL6 79 aa11.93□□□□□ -0.5
PKP3-211ENST00000534401 A6NJY4 79 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms