RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 FAM229BQ4G0N7 80 aa11.19□□□□□ -0.62
PACS1-215ENST00000534273 UBR4Q5T4S7 5183 aa11.18□□□□□ -0.62
PACS1-215ENST00000534273 LINC00337Q8N6G1 96 aa11.18□□□□□ -0.62
PACS1-215ENST00000534273 LRP2P98164 4655 aa11.17□□□□□ -0.62
PACS1-215ENST00000534273 KRTAP4-16G5E9R7 235 aaPredicted RBP11.17□□□□□ -0.62
PACS1-215ENST00000534273 EIF4EBP3O60516 100 aaPredicted RBP11.17□□□□□ -0.62
PACS1-215ENST00000534273 KRTAP13-2Q52LG2 175 aa11.17□□□□□ -0.62
PACS1-215ENST00000534273 SOSTDC1Q6X4U4 206 aa11.17□□□□□ -0.62
PACS1-215ENST00000534273 C2orf91Q6ZV80 131 aa11.17□□□□□ -0.62
PACS1-215ENST00000534273 TYMSOSQ8TAI1 123 aa11.17□□□□□ -0.62
PACS1-215ENST00000534273 HIGD2AQ9BW72 106 aa11.17□□□□□ -0.62
PACS1-215ENST00000534273 SPANXB1Q9NS25 103 aaPredicted RBP11.17□□□□□ -0.62
PACS1-215ENST00000534273 NDUFC2O95298 119 aa11.16□□□□□ -0.62
PACS1-215ENST00000534273 CTAG1AP78358 180 aa11.16□□□□□ -0.62
PACS1-215ENST00000534273 LITAFQ99732 161 aa11.15□□□□□ -0.62
PACS1-215ENST00000534273 TTTY13Q9BZ97 58 aa11.15□□□□□ -0.62
PACS1-215ENST00000534273 NPC2P61916 151 aa11.14□□□□□ -0.63
PACS1-215ENST00000534273 ETDCA0A1B0GVM5 59 aa11.13□□□□□ -0.63
PACS1-215ENST00000534273 ZNF815PA8K554 130 aa11.13□□□□□ -0.63
PACS1-215ENST00000534273 TIMM17BO60830 172 aa11.13□□□□□ -0.63
PACS1-215ENST00000534273 IGLV6-57P01721 117 aa11.12□□□□□ -0.63
PACS1-215ENST00000534273 M0R143 59 aa11.11□□□□□ -0.63
PACS1-215ENST00000534273 TAL2Q16559 108 aa11.11□□□□□ -0.63
PACS1-215ENST00000534273 SPRR4Q96PI1 79 aa11.11□□□□□ -0.63
PACS1-215ENST00000534273 B5MCH6 92 aa11.1□□□□□ -0.63
PACS1-215ENST00000534273 S100A7L2Q5SY68 101 aa11.1□□□□□ -0.63
PACS1-215ENST00000534273 LINC00308Q8TCZ7 52 aa11.1□□□□□ -0.63
PACS1-215ENST00000534273 TSPAN13O95857 204 aa11.09□□□□□ -0.63
PACS1-215ENST00000534273 HSD52Q0P140 79 aa11.09□□□□□ -0.63
PACS1-215ENST00000534273 SMCR5Q8TEV8 140 aa11.09□□□□□ -0.63
PACS1-215ENST00000534273 SNHG12Q9BXW3 62 aa11.09□□□□□ -0.63
PACS1-215ENST00000534273 ZNF706Q9Y5V0 76 aaPredicted RBP11.08□□□□□ -0.64
PACS1-215ENST00000534273 SCGB1D4Q6XE38 83 aa11.06□□□□□ -0.64
PACS1-215ENST00000534273 SPANXCQ9NY87 97 aa11.06□□□□□ -0.64
PACS1-215ENST00000534273 TRAV23DV6A0A075B6W5 121 aa11.05□□□□□ -0.64
PACS1-215ENST00000534273 C3orf22Q8N5N4 141 aa11.05□□□□□ -0.64
PACS1-215ENST00000534273 LINC00304Q8N9R0 145 aa11.05□□□□□ -0.64
PACS1-215ENST00000534273 BVES-AS1Q5T3Y7 98 aa11.04□□□□□ -0.64
PACS1-215ENST00000534273 Q6ZRX8 168 aa11.04□□□□□ -0.64
PACS1-215ENST00000534273 ERC2-IT1O76042 136 aa11.03□□□□□ -0.64
PACS1-215ENST00000534273 HINT1P49773 126 aaPredicted RBP11.03□□□□□ -0.64
PACS1-215ENST00000534273 PRR4Q16378 134 aa11.03□□□□□ -0.64
PACS1-215ENST00000534273 Q9BRP9 147 aa11.03□□□□□ -0.64
PACS1-215ENST00000534273 ZNF73O43830 326 aaPredicted RBP11.02□□□□□ -0.65
PACS1-215ENST00000534273 LINC00483Q53H64 154 aa11.01□□□□□ -0.65
PACS1-215ENST00000534273 Q6ZVH6 145 aa11.01□□□□□ -0.65
PACS1-215ENST00000534273 CEND1Q8N111 149 aa11.01□□□□□ -0.65
PACS1-215ENST00000534273 HIST1H4GQ99525 98 aa11.01□□□□□ -0.65
PACS1-215ENST00000534273 SPANXDQ9BXN6 97 aa11.01□□□□□ -0.65
PACS1-215ENST00000534273 PPDPFQ9H3Y8 114 aa11.01□□□□□ -0.65
PACS1-215ENST00000534273 CBY1Q9Y3M2 126 aa11□□□□□ -0.65
PACS1-215ENST00000534273 LPAP08519 4548 aa10.99□□□□□ -0.65
PACS1-215ENST00000534273 COL5A1-AS1Q5SY13 56 aa10.99□□□□□ -0.65
PACS1-215ENST00000534273 OR13C6PQ8NH95 151 aa10.99□□□□□ -0.65
PACS1-215ENST00000534273 GAGE2AQ6NT46 116 aa10.98□□□□□ -0.65
PACS1-215ENST00000534273 BATFQ16520 125 aa10.97□□□□□ -0.65
PACS1-215ENST00000534273 IFITM1P13164 125 aa10.96□□□□□ -0.65
PACS1-215ENST00000534273 A6NDN8 102 aa10.95□□□□□ -0.66
PACS1-215ENST00000534273 COPS9Q8WXC6 57 aa10.95□□□□□ -0.66
PACS1-215ENST00000534273 FXYD2P54710 66 aa10.94□□□□□ -0.66
PACS1-215ENST00000534273 TMEM238LA0A1B0GVL6 79 aa10.93□□□□□ -0.66
PACS1-215ENST00000534273 A0A1B0GWB2 263 aa10.93□□□□□ -0.66
PACS1-215ENST00000534273 A6NJY4 79 aa10.93□□□□□ -0.66
PACS1-215ENST00000534273 SPAG11AQ6PDA7 123 aa10.93□□□□□ -0.66
PACS1-215ENST00000534273 MUSTN1Q8IVN3 82 aa10.92□□□□□ -0.66
PACS1-215ENST00000534273 Q8NBF4 154 aa10.92□□□□□ -0.66
PACS1-215ENST00000534273 RETNLBQ9BQ08 111 aa10.91□□□□□ -0.66
PACS1-215ENST00000534273 ST20-AS1Q8NBB2 130 aa10.9□□□□□ -0.66
PACS1-215ENST00000534273 C4orf48Q5BLP8 95 aa10.89□□□□□ -0.67
PACS1-215ENST00000534273 IGLV9-49A0A0B4J1Y8 123 aa10.88□□□□□ -0.67
PACS1-215ENST00000534273 C6orf99Q4VX62 202 aa10.88□□□□□ -0.67
PACS1-215ENST00000534273 DHRS4-AS1Q9P1J3 65 aa10.88□□□□□ -0.67
PACS1-215ENST00000534273 TAX1BP3O14907 124 aa10.87□□□□□ -0.67
PACS1-215ENST00000534273 COX7BP24311 80 aa10.87□□□□□ -0.67
PACS1-215ENST00000534273 ELOF1P60002 83 aaKnown RBP10.87□□□□□ -0.67
PACS1-215ENST00000534273 MOBPQ13875 183 aa10.87□□□□□ -0.67
PACS1-215ENST00000534273 SSBP3-AS1Q7Z2R9 100 aa10.86□□□□□ -0.67
PACS1-215ENST00000534273 NHP2Q9NX24 153 aaKnown RBP10.86□□□□□ -0.67
PACS1-215ENST00000534273 RNF213Q63HN8 5207 aa10.86□□□□□ -0.67
PACS1-215ENST00000534273 A4D1N5 150 aa10.85□□□□□ -0.67
PACS1-215ENST00000534273 TRBV7-6A0A0J9YX20 115 aa10.84□□□□□ -0.67
PACS1-215ENST00000534273 A0A0B4J2C4 111 aa10.83□□□□□ -0.68
PACS1-215ENST00000534273 SPINK1P00995 79 aa10.83□□□□□ -0.68
PACS1-215ENST00000534273 CFC1BP0CG36 223 aa10.83□□□□□ -0.68
PACS1-215ENST00000534273 CFC1P0CG37 223 aa10.83□□□□□ -0.68
PACS1-215ENST00000534273 IGLV7-46A0A075B6I9 117 aa10.82□□□□□ -0.68
PACS1-215ENST00000534273 SPRR1BP22528 89 aa10.82□□□□□ -0.68
PACS1-215ENST00000534273 TRAV13-2A0A0B4J235 113 aa10.81□□□□□ -0.68
PACS1-215ENST00000534273 C9orf118A6NHY6 69 aa10.81□□□□□ -0.68
PACS1-215ENST00000534273 C9orf153Q5TBE3 101 aa10.79□□□□□ -0.68
PACS1-215ENST00000534273 PRO1854Q9UHT4 67 aa10.79□□□□□ -0.68
PACS1-215ENST00000534273 A0A1B0GV90 55 aa10.78□□□□□ -0.68
PACS1-215ENST00000534273 K7ERJ3 54 aa10.78□□□□□ -0.68
PACS1-215ENST00000534273 SMIM11BQ8TCY0 68 aa10.77□□□□□ -0.69
PACS1-215ENST00000534273 RAB37Q96AX2 223 aa10.77□□□□□ -0.69
PACS1-215ENST00000534273 RPS29P62273 56 aaKnown RBP10.76□□□□□ -0.69
PACS1-215ENST00000534273 TPRXLQ17RH7 258 aa10.76□□□□□ -0.69
PACS1-215ENST00000534273 FP248Q71RG6 208 aaPredicted RBP10.76□□□□□ -0.69
PACS1-215ENST00000534273 LAMTOR3Q9UHA4 124 aa10.74□□□□□ -0.69
PACS1-215ENST00000534273 DEFB105AQ8NG35 78 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms