RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 A0A0G2JQZ4 141 aa11.67□□□□□ -0.54
PAX6-228ENST00000533333 A0A1W2PNN7 141 aa11.67□□□□□ -0.54
PAX6-228ENST00000533333 LINC00483Q53H64 154 aa11.66□□□□□ -0.54
PAX6-228ENST00000533333 CPAMD8Q8IZJ3 1885 aa11.66□□□□□ -0.54
PAX6-228ENST00000533333 A0A087WTM6 91 aa11.65□□□□□ -0.54
PAX6-228ENST00000533333 LINC00528Q8N1L1 170 aa11.64□□□□□ -0.55
PAX6-228ENST00000533333 IGLV7-43P04211 117 aa11.63□□□□□ -0.55
PAX6-228ENST00000533333 K7EIL1 84 aa11.62□□□□□ -0.55
PAX6-228ENST00000533333 Q6ZSA8 131 aa11.62□□□□□ -0.55
PAX6-228ENST00000533333 C15orf56Q8N910 161 aa11.61□□□□□ -0.55
PAX6-228ENST00000533333 LCA10Q71F78 164 aa11.61□□□□□ -0.55
PAX6-228ENST00000533333 LINC00336Q6ZUF6 198 aa11.59□□□□□ -0.55
PAX6-228ENST00000533333 USP9XQ93008 2570 aaPredicted RBP11.59□□□□□ -0.55
PAX6-228ENST00000533333 KRTAP10-11P60412 298 aa11.59□□□□□ -0.55
PAX6-228ENST00000533333 LITAFQ99732 161 aa11.58□□□□□ -0.56
PAX6-228ENST00000533333 Q8N377 158 aa11.58□□□□□ -0.56
PAX6-228ENST00000533333 KTN1-AS1Q86SY8 53 aa11.56□□□□□ -0.56
PAX6-228ENST00000533333 CD164Q04900 197 aa11.55□□□□□ -0.56
PAX6-228ENST00000533333 SETD2Q9BYW2 2564 aaPredicted RBP11.55□□□□□ -0.56
PAX6-228ENST00000533333 PSORS1C2Q9UIG4 136 aa11.54□□□□□ -0.56
PAX6-228ENST00000533333 C9orf163Q8N9P6 203 aa11.51□□□□□ -0.57
PAX6-228ENST00000533333 PKD1L2Q7Z442 2459 aa11.5□□□□□ -0.57
PAX6-228ENST00000533333 SPRR4Q96PI1 79 aa11.49□□□□□ -0.57
PAX6-228ENST00000533333 PTPRBP23467 1997 aa11.49□□□□□ -0.57
PAX6-228ENST00000533333 Q1T7F1 81 aa11.49□□□□□ -0.57
PAX6-228ENST00000533333 KLKP1Q107X0 134 aa11.47□□□□□ -0.57
PAX6-228ENST00000533333 PRR26Q8N8Z3 221 aa11.46□□□□□ -0.58
PAX6-228ENST00000533333 PLA2G2DQ9UNK4 145 aa11.45□□□□□ -0.58
PAX6-228ENST00000533333 PRR34Q9NV39 138 aa11.45□□□□□ -0.58
PAX6-228ENST00000533333 C19orf73Q9NVV2 129 aa11.44□□□□□ -0.58
PAX6-228ENST00000533333 COL27A1Q8IZC6 1860 aaPredicted RBP11.44□□□□□ -0.58
PAX6-228ENST00000533333 IGLV7-46A0A075B6I9 117 aa11.44□□□□□ -0.58
PAX6-228ENST00000533333 TLX1NBP0CAT3 122 aa11.44□□□□□ -0.58
PAX6-228ENST00000533333 SRCAPQ6ZRS2 3230 aa11.42□□□□□ -0.58
PAX6-228ENST00000533333 USP9YO00507 2555 aaPredicted RBP11.4□□□□□ -0.58
PAX6-228ENST00000533333 LINC00612Q8N6U2 182 aa11.37□□□□□ -0.59
PAX6-228ENST00000533333 SPANXA2-OT1Q8N9U9 137 aa11.37□□□□□ -0.59
PAX6-228ENST00000533333 H7BZZ5 65 aa11.37□□□□□ -0.59
PAX6-228ENST00000533333 A0A1B0GU33 70 aa11.36□□□□□ -0.59
PAX6-228ENST00000533333 CASC10Q5T4H9 136 aa11.35□□□□□ -0.59
PAX6-228ENST00000533333 EIF4EBP3O60516 100 aaPredicted RBP11.34□□□□□ -0.59
PAX6-228ENST00000533333 FASNP49327 2511 aaKnown RBP11.33□□□□□ -0.6
PAX6-228ENST00000533333 A0A1W2PNM2 257 aa11.32□□□□□ -0.6
PAX6-228ENST00000533333 HRES1P13985 223 aa11.32□□□□□ -0.6
PAX6-228ENST00000533333 COL4A2P08572 1712 aa11.31□□□□□ -0.6
PAX6-228ENST00000533333 CEP295Q9C0D2 2601 aa11.31□□□□□ -0.6
PAX6-228ENST00000533333 CNBPP62633 177 aaKnown RBP11.31□□□□□ -0.6
PAX6-228ENST00000533333 MTORP42345 2549 aa11.3□□□□□ -0.6
PAX6-228ENST00000533333 ANKRD11Q6UB99 2663 aaPredicted RBP11.3□□□□□ -0.6
PAX6-228ENST00000533333 KRTAP10-3P60369 221 aa11.28□□□□□ -0.6
PAX6-228ENST00000533333 WIPF1O43516 503 aa11.27□□□□□ -0.61
PAX6-228ENST00000533333 A0A0A0MQY5 61 aa11.26□□□□□ -0.61
PAX6-228ENST00000533333 S4R3F8 94 aa11.26□□□□□ -0.61
PAX6-228ENST00000533333 CSAG1Q6PB30 78 aa11.25□□□□□ -0.61
PAX6-228ENST00000533333 POLQO75417 2590 aa11.24□□□□□ -0.61
PAX6-228ENST00000533333 TNP2Q05952 138 aa11.23□□□□□ -0.61
PAX6-228ENST00000533333 GIG44P09565 113 aaPredicted RBP11.22□□□□□ -0.61
PAX6-228ENST00000533333 ACANP16112 2415 aa11.22□□□□□ -0.61
PAX6-228ENST00000533333 KLK9Q2XQG4 91 aa11.21□□□□□ -0.62
PAX6-228ENST00000533333 SPTBN4Q9H254 2564 aa11.2□□□□□ -0.62
PAX6-228ENST00000533333 DMAC1Q96GE9 116 aa11.17□□□□□ -0.62
PAX6-228ENST00000533333 R4GN34 69 aa11.14□□□□□ -0.63
PAX6-228ENST00000533333 SPINK7P58062 85 aa11.11□□□□□ -0.63
PAX6-228ENST00000533333 ZCCHC13Q8WW36 166 aaKnown RBP11.11□□□□□ -0.63
PAX6-228ENST00000533333 WDR87Q6ZQQ6 2873 aa11.08□□□□□ -0.64
PAX6-228ENST00000533333 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.07□□□□□ -0.64
PAX6-228ENST00000533333 FAM229BQ4G0N7 80 aa11.03□□□□□ -0.64
PAX6-228ENST00000533333 OCR1Q9BZK8 76 aa11.03□□□□□ -0.64
PAX6-228ENST00000533333 Q75L30 129 aa11.03□□□□□ -0.64
PAX6-228ENST00000533333 SEC61BP60468 96 aaKnown RBP11.02□□□□□ -0.65
PAX6-228ENST00000533333 Q8N9P0 234 aaPredicted RBP10.99□□□□□ -0.65
PAX6-228ENST00000533333 PLAC4Q8WY50 150 aa10.99□□□□□ -0.65
PAX6-228ENST00000533333 PRAC1Q96KF2 57 aa10.99□□□□□ -0.65
PAX6-228ENST00000533333 H1FX-AS1Q4G0G2 97 aa10.97□□□□□ -0.65
PAX6-228ENST00000533333 A0A096LNT2 108 aa10.97□□□□□ -0.65
PAX6-228ENST00000533333 ANKRD17O75179 2603 aaKnown RBP10.95□□□□□ -0.66
PAX6-228ENST00000533333 H3BS24 57 aa10.94□□□□□ -0.66
PAX6-228ENST00000533333 LINC01558Q9Y6Z2 57 aa10.93□□□□□ -0.66
PAX6-228ENST00000533333 M0QZ58 72 aa10.91□□□□□ -0.66
PAX6-228ENST00000533333 MMP24-AS1A0A0U1RRL7 71 aa10.9□□□□□ -0.66
PAX6-228ENST00000533333 FLNBO75369 2602 aaKnown RBP10.89□□□□□ -0.67
PAX6-228ENST00000533333 Q5W150 140 aa10.88□□□□□ -0.67
PAX6-228ENST00000533333 MGAM2Q2M2H8 2515 aa10.88□□□□□ -0.67
PAX6-228ENST00000533333 USP24Q9UPU5 2620 aa10.87□□□□□ -0.67
PAX6-228ENST00000533333 PLAC8Q9NZF1 115 aa10.86□□□□□ -0.67
PAX6-228ENST00000533333 BPTFQ12830 3046 aa10.86□□□□□ -0.67
PAX6-228ENST00000533333 CR1P17927 2039 aa10.86□□□□□ -0.67
PAX6-228ENST00000533333 Q5VSD8 79 aa10.85□□□□□ -0.67
PAX6-228ENST00000533333 EPG5Q9HCE0 2579 aa10.84□□□□□ -0.67
PAX6-228ENST00000533333 ROMO1P60602 79 aa10.84□□□□□ -0.67
PAX6-228ENST00000533333 RPL37P61927 97 aaKnown RBP10.83□□□□□ -0.68
PAX6-228ENST00000533333 GOLGB1Q14789 3259 aaKnown RBP10.78□□□□□ -0.68
PAX6-228ENST00000533333 PCSK5Q92824 1860 aa10.76□□□□□ -0.69
PAX6-228ENST00000533333 KRTAP1-3Q8IUG1 177 aa10.75□□□□□ -0.69
PAX6-228ENST00000533333 KRTAP1-1Q07627 177 aa10.72□□□□□ -0.69
PAX6-228ENST00000533333 ADM2Q7Z4H4 148 aa10.71□□□□□ -0.69
PAX6-228ENST00000533333 Q5VV11 94 aa10.69□□□□□ -0.7
PAX6-228ENST00000533333 ATRQ13535 2644 aa10.68□□□□□ -0.7
PAX6-228ENST00000533333 HECTD1Q9ULT8 2610 aa10.68□□□□□ -0.7
PAX6-228ENST00000533333 FP248Q71RG6 208 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms