RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 SRSF9Q13242 221 aaKnown RBP eCLIP5.38□□□□□ -1.55
PTP4A2-213ENST00000532001 HIST1H4GQ99525 98 aa5.38□□□□□ -1.55
PTP4A2-213ENST00000532001 SND1-IT1Q9HBX3 110 aa5.38□□□□□ -1.55
PTP4A2-213ENST00000532001 LRP2P98164 4655 aa5.37□□□□□ -1.55
PTP4A2-213ENST00000532001 DAND5Q8N907 189 aa5.37□□□□□ -1.55
PTP4A2-213ENST00000532001 LINC00308Q8TCZ7 52 aa5.37□□□□□ -1.55
PTP4A2-213ENST00000532001 LINC01600Q96MT4 127 aa5.37□□□□□ -1.55
PTP4A2-213ENST00000532001 A0A0U1RRA0 63 aa5.36□□□□□ -1.55
PTP4A2-213ENST00000532001 M0R143 59 aa5.36□□□□□ -1.55
PTP4A2-213ENST00000532001 NDUFC2O95298 119 aa5.36□□□□□ -1.55
PTP4A2-213ENST00000532001 RPL24P83731 157 aaKnown RBP5.36□□□□□ -1.55
PTP4A2-213ENST00000532001 CEND1Q8N111 149 aa5.36□□□□□ -1.55
PTP4A2-213ENST00000532001 CTAG1AP78358 180 aa5.35□□□□□ -1.55
PTP4A2-213ENST00000532001 SPINK6Q6UWN8 80 aa5.35□□□□□ -1.55
PTP4A2-213ENST00000532001 SOSTDC1Q6X4U4 206 aa5.35□□□□□ -1.55
PTP4A2-213ENST00000532001 MUSTN1Q8IVN3 82 aa5.35□□□□□ -1.55
PTP4A2-213ENST00000532001 GAGE2BQ13066 116 aa5.34□□□□□ -1.55
PTP4A2-213ENST00000532001 GAGE2EQ4V326 116 aa5.34□□□□□ -1.55
PTP4A2-213ENST00000532001 C9orf129Q5T035 196 aaKnown RBP5.34□□□□□ -1.55
PTP4A2-213ENST00000532001 SVIPQ8NHG7 77 aa5.34□□□□□ -1.55
PTP4A2-213ENST00000532001 XAGE1AQ9HD64 81 aa5.34□□□□□ -1.55
PTP4A2-213ENST00000532001 GAGE2DQ9UEU5 116 aa5.34□□□□□ -1.55
PTP4A2-213ENST00000532001 IGLV5-37A0A075B6J1 123 aa5.33□□□□□ -1.56
PTP4A2-213ENST00000532001 TRBV10-2A0A0K0K1G8 114 aa5.33□□□□□ -1.56
PTP4A2-213ENST00000532001 NPC2P61916 151 aa5.33□□□□□ -1.56
PTP4A2-213ENST00000532001 REG3GQ6UW15 175 aa5.33□□□□□ -1.56
PTP4A2-213ENST00000532001 A0A0B4J2C4 111 aa5.32□□□□□ -1.56
PTP4A2-213ENST00000532001 A4D1N5 150 aa5.32□□□□□ -1.56
PTP4A2-213ENST00000532001 VPREB1P12018 145 aa5.32□□□□□ -1.56
PTP4A2-213ENST00000532001 FXYD2P54710 66 aa5.32□□□□□ -1.56
PTP4A2-213ENST00000532001 KRTAP10-8P60410 259 aa5.32□□□□□ -1.56
PTP4A2-213ENST00000532001 BVES-AS1Q5T3Y7 98 aa5.32□□□□□ -1.56
PTP4A2-213ENST00000532001 RNF213Q63HN8 5207 aa5.31□□□□□ -1.56
PTP4A2-213ENST00000532001 A0A1B0GWB2 263 aa5.31□□□□□ -1.56
PTP4A2-213ENST00000532001 A6NDN8 102 aa5.31□□□□□ -1.56
PTP4A2-213ENST00000532001 Q8NDZ9 215 aa5.31□□□□□ -1.56
PTP4A2-213ENST00000532001 IGKV2-28A0A075B6P5 120 aa5.3□□□□□ -1.56
PTP4A2-213ENST00000532001 TRAV13-2A0A0B4J235 113 aa5.3□□□□□ -1.56
PTP4A2-213ENST00000532001 A0A1W2PNN7 141 aa5.3□□□□□ -1.56
PTP4A2-213ENST00000532001 PCP4L1A6NKN8 68 aa5.3□□□□□ -1.56
PTP4A2-213ENST00000532001 IGKV2D-28P01615 120 aa5.3□□□□□ -1.56
PTP4A2-213ENST00000532001 HINT1P49773 126 aaPredicted RBP5.3□□□□□ -1.56
PTP4A2-213ENST00000532001 NKAPP1Q8N9T2 125 aa5.3□□□□□ -1.56
PTP4A2-213ENST00000532001 FAM168BA1KXE4 195 aa5.29□□□□□ -1.56
PTP4A2-213ENST00000532001 M0R378 163 aa5.29□□□□□ -1.56
PTP4A2-213ENST00000532001 CFC1BP0CG36 223 aa5.29□□□□□ -1.56
PTP4A2-213ENST00000532001 CFC1P0CG37 223 aa5.29□□□□□ -1.56
PTP4A2-213ENST00000532001 NHP2Q9NX24 153 aaKnown RBP5.29□□□□□ -1.56
PTP4A2-213ENST00000532001 M0QXV9 152 aa5.28□□□□□ -1.56
PTP4A2-213ENST00000532001 NCR3O14931 201 aa5.28□□□□□ -1.56
PTP4A2-213ENST00000532001 FAM19A5Q7Z5A7 132 aaPredicted RBP5.28□□□□□ -1.56
PTP4A2-213ENST00000532001 MRPL55Q7Z7F7 128 aaKnown RBP5.28□□□□□ -1.56
PTP4A2-213ENST00000532001 KRTAP7-1Q8IUC3 87 aa5.28□□□□□ -1.56
PTP4A2-213ENST00000532001 LINC00337Q8N6G1 96 aa5.28□□□□□ -1.56
PTP4A2-213ENST00000532001 RAB37Q96AX2 223 aa5.28□□□□□ -1.56
PTP4A2-213ENST00000532001 TMEM126AQ9H061 195 aa5.28□□□□□ -1.56
PTP4A2-213ENST00000532001 PSORS1C2Q9UIG4 136 aa5.28□□□□□ -1.56
PTP4A2-213ENST00000532001 CBY1Q9Y3M2 126 aa5.28□□□□□ -1.56
PTP4A2-213ENST00000532001 C22orf24Q9Y442 160 aa5.28□□□□□ -1.56
PTP4A2-213ENST00000532001 IGLV6-57P01721 117 aa5.27□□□□□ -1.57
PTP4A2-213ENST00000532001 LBHQ53QV2 105 aaPredicted RBP5.27□□□□□ -1.57
PTP4A2-213ENST00000532001 SNHG12Q9BXW3 62 aa5.27□□□□□ -1.57
PTP4A2-213ENST00000532001 PRO1854Q9UHT4 67 aa5.27□□□□□ -1.57
PTP4A2-213ENST00000532001 TRIAP1O43715 76 aa5.26□□□□□ -1.57
PTP4A2-213ENST00000532001 BATFQ16520 125 aa5.26□□□□□ -1.57
PTP4A2-213ENST00000532001 S100A7L2Q5SY68 101 aa5.26□□□□□ -1.57
PTP4A2-213ENST00000532001 K7ERJ3 54 aa5.25□□□□□ -1.57
PTP4A2-213ENST00000532001 RPL13AP40429 203 aaKnown RBP5.25□□□□□ -1.57
PTP4A2-213ENST00000532001 COL5A1-AS1Q5SY13 56 aa5.25□□□□□ -1.57
PTP4A2-213ENST00000532001 PHF5AQ7RTV0 110 aaKnown RBP5.25□□□□□ -1.57
PTP4A2-213ENST00000532001 LINC00167Q96N53 147 aa5.25□□□□□ -1.57
PTP4A2-213ENST00000532001 KCNQ1DNQ9H478 68 aa5.25□□□□□ -1.57
PTP4A2-213ENST00000532001 IGLV1-50A0A075B6I6 118 aa5.24□□□□□ -1.57
PTP4A2-213ENST00000532001 TRBV10-3A0A0K0K1G6 114 aa5.24□□□□□ -1.57
PTP4A2-213ENST00000532001 PRYO14603 147 aa5.24□□□□□ -1.57
PTP4A2-213ENST00000532001 IGLV7-43P04211 117 aa5.24□□□□□ -1.57
PTP4A2-213ENST00000532001 C1orf137Q5JT78 98 aa5.24□□□□□ -1.57
PTP4A2-213ENST00000532001 OR13C6PQ8NH95 151 aa5.24□□□□□ -1.57
PTP4A2-213ENST00000532001 DIRC1Q969H9 104 aa5.24□□□□□ -1.57
PTP4A2-213ENST00000532001 TRAV23DV6A0A075B6W5 121 aa5.23□□□□□ -1.57
PTP4A2-213ENST00000532001 TRBV7-6A0A0J9YX20 115 aa5.22□□□□□ -1.57
PTP4A2-213ENST00000532001 GAGE10A6NGK3 116 aa5.22□□□□□ -1.57
PTP4A2-213ENST00000532001 H0Y9J4 135 aa5.22□□□□□ -1.57
PTP4A2-213ENST00000532001 TSPAN13O95857 204 aa5.22□□□□□ -1.57
PTP4A2-213ENST00000532001 SPRR1AP35321 89 aa5.22□□□□□ -1.57
PTP4A2-213ENST00000532001 RPL28P46779 137 aaKnown RBP5.22□□□□□ -1.57
PTP4A2-213ENST00000532001 UBE2BP63146 152 aa5.22□□□□□ -1.57
PTP4A2-213ENST00000532001 Q1RN00 199 aa5.22□□□□□ -1.57
PTP4A2-213ENST00000532001 RPL37AP8A6NKH3 93 aa5.21□□□□□ -1.58
PTP4A2-213ENST00000532001 TAX1BP3O14907 124 aa5.21□□□□□ -1.58
PTP4A2-213ENST00000532001 ZNF73O43830 326 aaPredicted RBP5.21□□□□□ -1.58
PTP4A2-213ENST00000532001 KRTAP11-1Q8IUC1 163 aa5.21□□□□□ -1.58
PTP4A2-213ENST00000532001 SMIM11BQ8TCY0 68 aa5.21□□□□□ -1.58
PTP4A2-213ENST00000532001 KRTAP4-16G5E9R7 235 aaPredicted RBP5.19□□□□□ -1.58
PTP4A2-213ENST00000532001 H7C2G1 150 aa5.19□□□□□ -1.58
PTP4A2-213ENST00000532001 COX6CP09669 75 aa5.19□□□□□ -1.58
PTP4A2-213ENST00000532001 KRTAP1-4P0C5Y4 121 aa5.19□□□□□ -1.58
PTP4A2-213ENST00000532001 C6orf99Q4VX62 202 aa5.19□□□□□ -1.58
PTP4A2-213ENST00000532001 LYRM7Q5U5X0 104 aa5.19□□□□□ -1.58
PTP4A2-213ENST00000532001 ETDCA0A1B0GVM5 59 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms