RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	KRTAP4-1	Q9BYQ7	146 aa		3.24	□□□□□ -1.89
PUM1-222	ENST00000531867	TRBV25-1	A0A075B6N4	114 aa		3.23	□□□□□ -1.89
PUM1-222	ENST00000531867	TRBV6-1	A0A0K0K1D8	114 aa		3.23	□□□□□ -1.89
PUM1-222	ENST00000531867	NCR2	O95944	276 aa		3.23	□□□□□ -1.89
PUM1-222	ENST00000531867	ARMS2	P0C7Q2	107 aa		3.23	□□□□□ -1.89
PUM1-222	ENST00000531867	RAB5C	P51148	216 aa		3.23	□□□□□ -1.89
PUM1-222	ENST00000531867	FAM74A1	Q5RGS3	127 aa		3.23	□□□□□ -1.89
PUM1-222	ENST00000531867	TRBV27	A0A0K0K1C4	114 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867		H3BT86	120 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867		H3BVH4	76 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867	TCRA	P04437	139 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867	SMIM6	P0DI80	62 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867	CRYGA	P11844	174 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867	UBE2D1	P51668	147 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867	KRTAP13-3	Q3SY46	172 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867	ASB16-AS1	Q495Z4	193 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867	KHDC3L	Q587J8	217 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867	C2orf91	Q6ZV80	131 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867	KRTAP11-1	Q8IUC1	163 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867	BRK1	Q8WUW1	75 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867	AQP10	Q96PS8	301 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867	IMMP2L	Q96T52	175 aa		3.22	□□□□□ -1.89
PUM1-222	ENST00000531867	IGHV1-24	A0A0C4DH33	117 aa		3.21	□□□□□ -1.9
PUM1-222	ENST00000531867	IGLC6	P0CF74	106 aa		3.21	□□□□□ -1.9
PUM1-222	ENST00000531867	CRIP1	P50238	77 aa		3.21	□□□□□ -1.9
PUM1-222	ENST00000531867	KRTAP19-2	Q3LHN2	52 aa		3.21	□□□□□ -1.9
PUM1-222	ENST00000531867	TOMM5	Q8N4H5	51 aa		3.21	□□□□□ -1.9
PUM1-222	ENST00000531867	NHP2	Q9NX24	153 aa	Known RBP	3.21	□□□□□ -1.9
PUM1-222	ENST00000531867	NDUFB6	O95139	128 aa		3.2	□□□□□ -1.9
PUM1-222	ENST00000531867	RPL28	P46779	137 aa	Known RBP	3.2	□□□□□ -1.9
PUM1-222	ENST00000531867	MT1H	P80294	61 aa		3.2	□□□□□ -1.9
PUM1-222	ENST00000531867	C9orf116	Q5BN46	136 aa	Predicted RBP	3.2	□□□□□ -1.9
PUM1-222	ENST00000531867	C5orf17	Q8NAS9	161 aa		3.2	□□□□□ -1.9
PUM1-222	ENST00000531867	PRELID3A	Q96N28	172 aa		3.2	□□□□□ -1.9
PUM1-222	ENST00000531867	TNFSF18	Q9UNG2	199 aa		3.2	□□□□□ -1.9
PUM1-222	ENST00000531867	TPT1	P13693	172 aa	Known RBP	3.19	□□□□□ -1.9
PUM1-222	ENST00000531867	FXYD2	P54710	66 aa		3.19	□□□□□ -1.9
PUM1-222	ENST00000531867	FAM229B	Q4G0N7	80 aa		3.19	□□□□□ -1.9
PUM1-222	ENST00000531867	OCIAD2	Q56VL3	154 aa		3.19	□□□□□ -1.9
PUM1-222	ENST00000531867	SPINT4	Q6UDR6	99 aa		3.19	□□□□□ -1.9
PUM1-222	ENST00000531867	LYZL1	Q6UWQ5	148 aa		3.19	□□□□□ -1.9
PUM1-222	ENST00000531867	C20orf202	A1L168	122 aa		3.18	□□□□□ -1.9
PUM1-222	ENST00000531867	C17orf112	F2Z3M2	114 aa		3.18	□□□□□ -1.9
PUM1-222	ENST00000531867	S100A8	P05109	93 aa		3.18	□□□□□ -1.9
PUM1-222	ENST00000531867	ZNF56	Q15929	161 aa		3.18	□□□□□ -1.9
PUM1-222	ENST00000531867	LINC00526	Q96FQ7	95 aa		3.18	□□□□□ -1.9
PUM1-222	ENST00000531867	RETNLB	Q9BQ08	111 aa		3.18	□□□□□ -1.9
PUM1-222	ENST00000531867	TRAV7	A0A075B6U4	112 aa		3.17	□□□□□ -1.9
PUM1-222	ENST00000531867		A0A1B0GU33	70 aa		3.17	□□□□□ -1.9
PUM1-222	ENST00000531867		H7C2G1	150 aa		3.17	□□□□□ -1.9
PUM1-222	ENST00000531867		M0QY20	66 aa		3.17	□□□□□ -1.9
PUM1-222	ENST00000531867	UQCRQ	O14949	82 aa		3.17	□□□□□ -1.9
PUM1-222	ENST00000531867	PYDC2	Q56P42	97 aa		3.17	□□□□□ -1.9
PUM1-222	ENST00000531867	C1orf64	Q8NEQ6	169 aa		3.17	□□□□□ -1.9
PUM1-222	ENST00000531867	TSKU	Q8WUA8	353 aa		3.17	□□□□□ -1.9
PUM1-222	ENST00000531867	C14orf144	Q96I85	54 aa		3.17	□□□□□ -1.9
PUM1-222	ENST00000531867	TMEM191A	Q9H0A3	160 aa		3.17	□□□□□ -1.9
PUM1-222	ENST00000531867	ARL2-SNX15	V9GYD0	113 aa		3.17	□□□□□ -1.9
PUM1-222	ENST00000531867		V9GYH0	126 aa		3.17	□□□□□ -1.9
PUM1-222	ENST00000531867	NAP1L6	A6NFF2	107 aa		3.16	□□□□□ -1.9
PUM1-222	ENST00000531867	AKR1D1	P51857	326 aa		3.16	□□□□□ -1.9
PUM1-222	ENST00000531867	FOXA3	P55318	350 aa	Predicted RBP	3.16	□□□□□ -1.9
PUM1-222	ENST00000531867	MRPS36	P82909	103 aa	Known RBP	3.16	□□□□□ -1.9
PUM1-222	ENST00000531867	LINC00483	Q53H64	154 aa		3.16	□□□□□ -1.9
PUM1-222	ENST00000531867	LCE3A	Q5TA76	89 aa		3.16	□□□□□ -1.9
PUM1-222	ENST00000531867		Q8NDZ9	215 aa		3.16	□□□□□ -1.9
PUM1-222	ENST00000531867	TRBV10-2	A0A0K0K1G8	114 aa		3.15	□□□□□ -1.91
PUM1-222	ENST00000531867	ZNF727	A8MUV8	499 aa		3.15	□□□□□ -1.91
PUM1-222	ENST00000531867		K7ERJ3	54 aa		3.15	□□□□□ -1.91
PUM1-222	ENST00000531867	ARL14EPL	P0DKL9	152 aa		3.15	□□□□□ -1.91
PUM1-222	ENST00000531867	SOSTDC1	Q6X4U4	206 aa		3.15	□□□□□ -1.91
PUM1-222	ENST00000531867	C7orf65	Q6ZTY9	151 aa		3.15	□□□□□ -1.91
PUM1-222	ENST00000531867	OR10AG1	Q8NH19	301 aa		3.15	□□□□□ -1.91
PUM1-222	ENST00000531867	PSMG3	Q9BT73	122 aa	Predicted RBP	3.15	□□□□□ -1.91
PUM1-222	ENST00000531867	SSPO	A2VEC9	5147 aa		3.14	□□□□□ -1.91
PUM1-222	ENST00000531867	IGKV3OR2-268	A0A0C4DH90	116 aa		3.14	□□□□□ -1.91
PUM1-222	ENST00000531867	C11orf86	A6NJI1	115 aa		3.14	□□□□□ -1.91
PUM1-222	ENST00000531867	ZNF22	P17026	224 aa	Predicted RBP	3.14	□□□□□ -1.91
PUM1-222	ENST00000531867	KRTAP13-2	Q52LG2	175 aa		3.14	□□□□□ -1.91
PUM1-222	ENST00000531867		Q86TA4	180 aa		3.14	□□□□□ -1.91
PUM1-222	ENST00000531867	HIGD2A	Q9BW72	106 aa		3.14	□□□□□ -1.91
PUM1-222	ENST00000531867	ZFP30	Q9Y2G7	519 aa		3.14	□□□□□ -1.91
PUM1-222	ENST00000531867	TMSB15B	A0A087X1C1	80 aa		3.13	□□□□□ -1.91
PUM1-222	ENST00000531867	LINC00959	A0A1B0GUT2	108 aa		3.13	□□□□□ -1.91
PUM1-222	ENST00000531867	LYRM1	O43325	122 aa		3.13	□□□□□ -1.91
PUM1-222	ENST00000531867	HBD	P02042	147 aa		3.13	□□□□□ -1.91
PUM1-222	ENST00000531867	GCHFR	P30047	84 aa		3.13	□□□□□ -1.91
PUM1-222	ENST00000531867	CCL25	O15444	150 aa		3.12	□□□□□ -1.91
PUM1-222	ENST00000531867	TIMM17B	O60830	172 aa		3.12	□□□□□ -1.91
PUM1-222	ENST00000531867	KRTAP25-1	Q3LHN0	102 aa		3.12	□□□□□ -1.91
PUM1-222	ENST00000531867	FP248	Q71RG6	208 aa	Predicted RBP	3.12	□□□□□ -1.91
PUM1-222	ENST00000531867	TEN1	Q86WV5	123 aa		3.12	□□□□□ -1.91
PUM1-222	ENST00000531867	ATOH7	Q8N100	152 aa		3.12	□□□□□ -1.91
PUM1-222	ENST00000531867	LINC00304	Q8N9R0	145 aa		3.12	□□□□□ -1.91
PUM1-222	ENST00000531867	CHCHD1	Q96BP2	118 aa	Known RBP	3.12	□□□□□ -1.91
PUM1-222	ENST00000531867	NIT2	Q9NQR4	276 aa		3.12	□□□□□ -1.91
PUM1-222	ENST00000531867	ANAPC11	Q9NYG5	84 aa		3.12	□□□□□ -1.91
PUM1-222	ENST00000531867	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.12	□□□□□ -1.91
PUM1-222	ENST00000531867	USH2A	O75445	5202 aa		3.12	□□□□□ -1.91
PUM1-222	ENST00000531867	SPANXN1	Q5VSR9	72 aa		3.11	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms