RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 ERC2-IT1O76042 136 aa9.6□□□□□ -0.87
LRRK1-207ENST00000531270 WDR87Q6ZQQ6 2873 aa9.6□□□□□ -0.87
LRRK1-207ENST00000531270 LUZP6Q538Z0 58 aa9.6□□□□□ -0.87
LRRK1-207ENST00000531270 PTPRBP23467 1997 aa9.6□□□□□ -0.87
LRRK1-207ENST00000531270 CSNK1G2-AS1Q8NCQ2 148 aa9.59□□□□□ -0.87
LRRK1-207ENST00000531270 Q8N377 158 aa9.59□□□□□ -0.87
LRRK1-207ENST00000531270 FAM104AQ969W3 186 aa9.58□□□□□ -0.88
LRRK1-207ENST00000531270 FN1P02751 2386 aaKnown RBP9.58□□□□□ -0.88
LRRK1-207ENST00000531270 CD164Q04900 197 aa9.58□□□□□ -0.88
LRRK1-207ENST00000531270 IGLV7-43P04211 117 aa9.58□□□□□ -0.88
LRRK1-207ENST00000531270 M0R2T5 61 aa9.57□□□□□ -0.88
LRRK1-207ENST00000531270 ABCA12Q86UK0 2595 aa9.57□□□□□ -0.88
LRRK1-207ENST00000531270 F8P00451 2351 aa9.57□□□□□ -0.88
LRRK1-207ENST00000531270 PCNTO95613 3336 aa9.56□□□□□ -0.88
LRRK1-207ENST00000531270 PSORS1C2Q9UIG4 136 aa9.55□□□□□ -0.88
LRRK1-207ENST00000531270 ZFYVE26Q68DK2 2539 aa9.54□□□□□ -0.88
LRRK1-207ENST00000531270 TLN2Q9Y4G6 2542 aa9.54□□□□□ -0.88
LRRK1-207ENST00000531270 CAMK2N1Q7Z7J9 78 aa9.54□□□□□ -0.88
LRRK1-207ENST00000531270 EIF4EBP3O60516 100 aaPredicted RBP9.53□□□□□ -0.88
LRRK1-207ENST00000531270 COL27A1Q8IZC6 1860 aaPredicted RBP9.53□□□□□ -0.88
LRRK1-207ENST00000531270 Q6ZSA8 131 aa9.51□□□□□ -0.89
LRRK1-207ENST00000531270 LCA10Q71F78 164 aa9.51□□□□□ -0.89
LRRK1-207ENST00000531270 LINC00336Q6ZUF6 198 aa9.5□□□□□ -0.89
LRRK1-207ENST00000531270 KTN1-AS1Q86SY8 53 aa9.5□□□□□ -0.89
LRRK1-207ENST00000531270 CASC10Q5T4H9 136 aa9.5□□□□□ -0.89
LRRK1-207ENST00000531270 C9orf163Q8N9P6 203 aa9.48□□□□□ -0.89
LRRK1-207ENST00000531270 SPRR4Q96PI1 79 aa9.48□□□□□ -0.89
LRRK1-207ENST00000531270 PRR34Q9NV39 138 aa9.46□□□□□ -0.9
LRRK1-207ENST00000531270 C19orf73Q9NVV2 129 aa9.46□□□□□ -0.9
LRRK1-207ENST00000531270 LINC00483Q53H64 154 aa9.46□□□□□ -0.9
LRRK1-207ENST00000531270 ZNF462Q96JM2 2506 aa9.45□□□□□ -0.9
LRRK1-207ENST00000531270 KRTAP10-3P60369 221 aa9.45□□□□□ -0.9
LRRK1-207ENST00000531270 PRR26Q8N8Z3 221 aa9.44□□□□□ -0.9
LRRK1-207ENST00000531270 COL4A2P08572 1712 aa9.44□□□□□ -0.9
LRRK1-207ENST00000531270 KLKP1Q107X0 134 aa9.44□□□□□ -0.9
LRRK1-207ENST00000531270 PIEZO1Q92508 2521 aa9.43□□□□□ -0.9
LRRK1-207ENST00000531270 H7BZZ5 65 aa9.41□□□□□ -0.9
LRRK1-207ENST00000531270 TLX1NBP0CAT3 122 aa9.4□□□□□ -0.9
LRRK1-207ENST00000531270 LINC00612Q8N6U2 182 aa9.4□□□□□ -0.91
LRRK1-207ENST00000531270 PLA2G2DQ9UNK4 145 aa9.39□□□□□ -0.91
LRRK1-207ENST00000531270 IGLV7-46A0A075B6I9 117 aa9.39□□□□□ -0.91
LRRK1-207ENST00000531270 Q1T7F1 81 aa9.39□□□□□ -0.91
LRRK1-207ENST00000531270 A0A1W2PNM2 257 aa9.39□□□□□ -0.91
LRRK1-207ENST00000531270 CEP350Q5VT06 3117 aa9.36□□□□□ -0.91
LRRK1-207ENST00000531270 GIG44P09565 113 aaPredicted RBP9.35□□□□□ -0.91
LRRK1-207ENST00000531270 SETD2Q9BYW2 2564 aaPredicted RBP9.34□□□□□ -0.91
LRRK1-207ENST00000531270 WIPF1O43516 503 aa9.34□□□□□ -0.91
LRRK1-207ENST00000531270 USP9XQ93008 2570 aaPredicted RBP9.34□□□□□ -0.92
LRRK1-207ENST00000531270 A0A1B0GU33 70 aa9.32□□□□□ -0.92
LRRK1-207ENST00000531270 PKD1L2Q7Z442 2459 aa9.32□□□□□ -0.92
LRRK1-207ENST00000531270 TNP2Q05952 138 aa9.32□□□□□ -0.92
LRRK1-207ENST00000531270 C5orf42Q9H799 3197 aa9.31□□□□□ -0.92
LRRK1-207ENST00000531270 SPANXA2-OT1Q8N9U9 137 aa9.31□□□□□ -0.92
LRRK1-207ENST00000531270 CNBPP62633 177 aaKnown RBP9.3□□□□□ -0.92
LRRK1-207ENST00000531270 ACANP16112 2415 aa9.27□□□□□ -0.93
LRRK1-207ENST00000531270 KLK9Q2XQG4 91 aa9.26□□□□□ -0.93
LRRK1-207ENST00000531270 H3BS24 57 aa9.25□□□□□ -0.93
LRRK1-207ENST00000531270 HRES1P13985 223 aa9.24□□□□□ -0.93
LRRK1-207ENST00000531270 S4R3F8 94 aa9.24□□□□□ -0.93
LRRK1-207ENST00000531270 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.21□□□□□ -0.94
LRRK1-207ENST00000531270 CSAG1Q6PB30 78 aa9.19□□□□□ -0.94
LRRK1-207ENST00000531270 A0A096LNT2 108 aa9.15□□□□□ -0.94
LRRK1-207ENST00000531270 A0A0A0MQY5 61 aa9.15□□□□□ -0.94
LRRK1-207ENST00000531270 PRAC1Q96KF2 57 aa9.14□□□□□ -0.95
LRRK1-207ENST00000531270 CHD8Q9HCK8 2581 aa9.14□□□□□ -0.95
LRRK1-207ENST00000531270 ZCCHC13Q8WW36 166 aaKnown RBP9.13□□□□□ -0.95
LRRK1-207ENST00000531270 Q8N9P0 234 aaPredicted RBP9.13□□□□□ -0.95
LRRK1-207ENST00000531270 BPTFQ12830 3046 aa9.13□□□□□ -0.95
LRRK1-207ENST00000531270 R4GN34 69 aa9.12□□□□□ -0.95
LRRK1-207ENST00000531270 OCR1Q9BZK8 76 aa9.12□□□□□ -0.95
LRRK1-207ENST00000531270 MTORP42345 2549 aa9.12□□□□□ -0.95
LRRK1-207ENST00000531270 DMAC1Q96GE9 116 aa9.12□□□□□ -0.95
LRRK1-207ENST00000531270 USP9YO00507 2555 aaPredicted RBP9.12□□□□□ -0.95
LRRK1-207ENST00000531270 SPINK7P58062 85 aa9.1□□□□□ -0.95
LRRK1-207ENST00000531270 PCSK5Q92824 1860 aa9.1□□□□□ -0.95
LRRK1-207ENST00000531270 ANKRD17O75179 2603 aaKnown RBP9.07□□□□□ -0.96
LRRK1-207ENST00000531270 ANKRD11Q6UB99 2663 aaPredicted RBP9.06□□□□□ -0.96
LRRK1-207ENST00000531270 MKI67P46013 3256 aaKnown RBP9.06□□□□□ -0.96
LRRK1-207ENST00000531270 Q75L30 129 aa9.06□□□□□ -0.96
LRRK1-207ENST00000531270 BRCA2P51587 3418 aa9.05□□□□□ -0.96
LRRK1-207ENST00000531270 POLQO75417 2590 aa9.05□□□□□ -0.96
LRRK1-207ENST00000531270 FAM229BQ4G0N7 80 aa9.02□□□□□ -0.96
LRRK1-207ENST00000531270 MMP24-AS1A0A0U1RRL7 71 aa9.01□□□□□ -0.97
LRRK1-207ENST00000531270 CR1P17927 2039 aa9.01□□□□□ -0.97
LRRK1-207ENST00000531270 KRTAP1-3Q8IUG1 177 aa9□□□□□ -0.97
LRRK1-207ENST00000531270 Q5W150 140 aa8.99□□□□□ -0.97
LRRK1-207ENST00000531270 SPTBN4Q9H254 2564 aa8.98□□□□□ -0.97
LRRK1-207ENST00000531270 CEP295Q9C0D2 2601 aa8.98□□□□□ -0.97
LRRK1-207ENST00000531270 LINC01558Q9Y6Z2 57 aa8.98□□□□□ -0.97
LRRK1-207ENST00000531270 SEC61BP60468 96 aaKnown RBP8.97□□□□□ -0.97
LRRK1-207ENST00000531270 M0QZ58 72 aa8.97□□□□□ -0.97
LRRK1-207ENST00000531270 KRTAP1-1Q07627 177 aa8.96□□□□□ -0.97
LRRK1-207ENST00000531270 H1FX-AS1Q4G0G2 97 aa8.96□□□□□ -0.98
LRRK1-207ENST00000531270 Q5VSD8 79 aa8.95□□□□□ -0.98
LRRK1-207ENST00000531270 PLAC8Q9NZF1 115 aa8.95□□□□□ -0.98
LRRK1-207ENST00000531270 PLAC4Q8WY50 150 aa8.94□□□□□ -0.98
LRRK1-207ENST00000531270 FASNP49327 2511 aaKnown RBP8.94□□□□□ -0.98
LRRK1-207ENST00000531270 ROMO1P60602 79 aa8.88□□□□□ -0.99
LRRK1-207ENST00000531270 RPL37P61927 97 aaKnown RBP8.87□□□□□ -0.99
LRRK1-207ENST00000531270 XIRP2A4UGR9 3374 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms