RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CRYGAP11844 174 aa11.19□□□□□ -0.62
BRCA2-204ENST00000530893 M0R2N4 97 aa11.18□□□□□ -0.62
BRCA2-204ENST00000530893 Q6ZVQ6 151 aa11.18□□□□□ -0.62
BRCA2-204ENST00000530893 NOTCH1P46531 2555 aa11.17□□□□□ -0.62
BRCA2-204ENST00000530893 CXCL6P80162 114 aa11.17□□□□□ -0.62
BRCA2-204ENST00000530893 DNAH1Q9P2D7 4330 aa11.17□□□□□ -0.62
BRCA2-204ENST00000530893 HUWE1Q7Z6Z7 4374 aaKnown RBP11.17□□□□□ -0.62
BRCA2-204ENST00000530893 PRYO14603 147 aa11.16□□□□□ -0.62
BRCA2-204ENST00000530893 LINC01547P58512 204 aaPredicted RBP11.16□□□□□ -0.62
BRCA2-204ENST00000530893 DHRS4-AS1Q9P1J3 65 aa11.16□□□□□ -0.62
BRCA2-204ENST00000530893 FAM19A1Q7Z5A9 133 aa11.15□□□□□ -0.62
BRCA2-204ENST00000530893 CASC10Q5T4H9 136 aa11.14□□□□□ -0.63
BRCA2-204ENST00000530893 IGLV1-50A0A075B6I6 118 aa11.14□□□□□ -0.63
BRCA2-204ENST00000530893 BCE1O60756 84 aa11.13□□□□□ -0.63
BRCA2-204ENST00000530893 SPRR1AP35321 89 aa11.13□□□□□ -0.63
BRCA2-204ENST00000530893 LOC107984640A0A0U1RRK4 108 aa11.13□□□□□ -0.63
BRCA2-204ENST00000530893 KRTAP4-16G5E9R7 235 aaPredicted RBP11.13□□□□□ -0.63
BRCA2-204ENST00000530893 HAMPP81172 84 aa11.13□□□□□ -0.63
BRCA2-204ENST00000530893 Q6ZRX8 168 aa11.13□□□□□ -0.63
BRCA2-204ENST00000530893 COL6A5A8TX70 2615 aa11.12□□□□□ -0.63
BRCA2-204ENST00000530893 NBEAL1Q6ZS30 2694 aa11.11□□□□□ -0.63
BRCA2-204ENST00000530893 ETDCA0A1B0GVM5 59 aa11.09□□□□□ -0.63
BRCA2-204ENST00000530893 FAM168BA1KXE4 195 aa11.09□□□□□ -0.63
BRCA2-204ENST00000530893 MRPL55Q7Z7F7 128 aaKnown RBP11.09□□□□□ -0.63
BRCA2-204ENST00000530893 Q8N377 158 aa11.08□□□□□ -0.64
BRCA2-204ENST00000530893 IGLV5-48A0A075B6I7 105 aa11.08□□□□□ -0.64
BRCA2-204ENST00000530893 RPL37AP8A6NKH3 93 aa11.08□□□□□ -0.64
BRCA2-204ENST00000530893 KRTAP7-1Q8IUC3 87 aa11.07□□□□□ -0.64
BRCA2-204ENST00000530893 A0A1B0GW54 56 aa11.06□□□□□ -0.64
BRCA2-204ENST00000530893 SMIM20Q8N5G0 67 aa11.06□□□□□ -0.64
BRCA2-204ENST00000530893 Q9BRP9 147 aa11.05□□□□□ -0.64
BRCA2-204ENST00000530893 DEFB105AQ8NG35 78 aa11.04□□□□□ -0.64
BRCA2-204ENST00000530893 CNBPP62633 177 aaKnown RBP11.03□□□□□ -0.64
BRCA2-204ENST00000530893 FAM19A5Q7Z5A7 132 aaPredicted RBP11.03□□□□□ -0.64
BRCA2-204ENST00000530893 TRAV7A0A075B6U4 112 aa11□□□□□ -0.65
BRCA2-204ENST00000530893 C16orf90A8MZG2 172 aa11□□□□□ -0.65
BRCA2-204ENST00000530893 REG3GQ6UW15 175 aa11□□□□□ -0.65
BRCA2-204ENST00000530893 TMEM258P61165 79 aa10.99□□□□□ -0.65
BRCA2-204ENST00000530893 TNP2Q05952 138 aa10.99□□□□□ -0.65
BRCA2-204ENST00000530893 NREPQ16612 68 aa10.99□□□□□ -0.65
BRCA2-204ENST00000530893 KRTAP1-5Q9BYS1 174 aa10.99□□□□□ -0.65
BRCA2-204ENST00000530893 APLNQ9ULZ1 77 aa10.99□□□□□ -0.65
BRCA2-204ENST00000530893 PSCAO43653 123 aa10.99□□□□□ -0.65
BRCA2-204ENST00000530893 C14orf177Q52M58 125 aa10.99□□□□□ -0.65
BRCA2-204ENST00000530893 UBE2DNLQ8IWF7 75 aa10.99□□□□□ -0.65
BRCA2-204ENST00000530893 FUSP35637 526 aaKnown RBP eCLIP10.98□□□□□ -0.65
BRCA2-204ENST00000530893 CYSTM1Q9H1C7 97 aa10.97□□□□□ -0.65
BRCA2-204ENST00000530893 UBE2BP63146 152 aa10.96□□□□□ -0.65
BRCA2-204ENST00000530893 MDFIQ99750 246 aa10.96□□□□□ -0.65
BRCA2-204ENST00000530893 B9D2Q9BPU9 175 aa10.96□□□□□ -0.66
BRCA2-204ENST00000530893 MGAM2Q2M2H8 2515 aa10.95□□□□□ -0.66
BRCA2-204ENST00000530893 SCXQ7RTU7 201 aa10.95□□□□□ -0.66
BRCA2-204ENST00000530893 A0A096LNI7 61 aa10.94□□□□□ -0.66
BRCA2-204ENST00000530893 C1orf137Q5JT78 98 aa10.94□□□□□ -0.66
BRCA2-204ENST00000530893 ST20-AS1Q8NBB2 130 aa10.94□□□□□ -0.66
BRCA2-204ENST00000530893 DNAH9Q9NYC9 4486 aa10.93□□□□□ -0.66
BRCA2-204ENST00000530893 C3orf84H3BNL1 204 aa10.92□□□□□ -0.66
BRCA2-204ENST00000530893 ERC2-IT1O76042 136 aa10.92□□□□□ -0.66
BRCA2-204ENST00000530893 BPY2O14599 106 aa10.92□□□□□ -0.66
BRCA2-204ENST00000530893 Q8NBF4 154 aa10.92□□□□□ -0.66
BRCA2-204ENST00000530893 PKIGQ9Y2B9 76 aa10.92□□□□□ -0.66
BRCA2-204ENST00000530893 DYNC2H1Q8NCM8 4307 aaKnown RBP10.91□□□□□ -0.66
BRCA2-204ENST00000530893 RPS28P62857 69 aaKnown RBP10.91□□□□□ -0.66
BRCA2-204ENST00000530893 A0A1W2PNM2 257 aa10.91□□□□□ -0.66
BRCA2-204ENST00000530893 C20orf197Q8N268 126 aa10.91□□□□□ -0.66
BRCA2-204ENST00000530893 SPRR4Q96PI1 79 aa10.91□□□□□ -0.66
BRCA2-204ENST00000530893 STAB2Q8WWQ8 2551 aa10.9□□□□□ -0.67
BRCA2-204ENST00000530893 IGKV2-24A0A0C4DH68 120 aa10.89□□□□□ -0.67
BRCA2-204ENST00000530893 IGKV4-1P06312 121 aa10.89□□□□□ -0.67
BRCA2-204ENST00000530893 KRTAP21-3Q3LHN1 58 aa10.89□□□□□ -0.67
BRCA2-204ENST00000530893 A0A1W2PNN7 141 aa10.89□□□□□ -0.67
BRCA2-204ENST00000530893 J3KT08 172 aa10.89□□□□□ -0.67
BRCA2-204ENST00000530893 COL7A1Q02388 2944 aa10.88□□□□□ -0.67
BRCA2-204ENST00000530893 KLKP1Q107X0 134 aa10.87□□□□□ -0.67
BRCA2-204ENST00000530893 DNAH10Q8IVF4 4471 aa10.87□□□□□ -0.67
BRCA2-204ENST00000530893 SMIM29Q86T20 159 aa10.87□□□□□ -0.67
BRCA2-204ENST00000530893 NUPR2A6NF83 97 aa10.86□□□□□ -0.67
BRCA2-204ENST00000530893 F8WEM9 126 aa10.86□□□□□ -0.67
BRCA2-204ENST00000530893 LYSTQ99698 3801 aa10.86□□□□□ -0.67
BRCA2-204ENST00000530893 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.84□□□□□ -0.67
BRCA2-204ENST00000530893 C9orf163Q8N9P6 203 aa10.84□□□□□ -0.67
BRCA2-204ENST00000530893 NBDYA0A0U1RRE5 68 aa10.83□□□□□ -0.68
BRCA2-204ENST00000530893 H0Y9J4 135 aa10.83□□□□□ -0.68
BRCA2-204ENST00000530893 Q8N9L7 120 aa10.83□□□□□ -0.68
BRCA2-204ENST00000530893 DPH3Q96FX2 82 aa10.83□□□□□ -0.68
BRCA2-204ENST00000530893 IGLV8-61A0A075B6I0 122 aa10.82□□□□□ -0.68
BRCA2-204ENST00000530893 LRCOL1A6NCL2 159 aa10.82□□□□□ -0.68
BRCA2-204ENST00000530893 PRLHP81277 87 aa10.82□□□□□ -0.68
BRCA2-204ENST00000530893 LINC00476Q8WZB0 136 aa10.82□□□□□ -0.68
BRCA2-204ENST00000530893 LINC00474Q9P2X8 69 aa10.82□□□□□ -0.68
BRCA2-204ENST00000530893 H7BZZ5 65 aa10.79□□□□□ -0.68
BRCA2-204ENST00000530893 NDUFC1O43677 76 aa10.79□□□□□ -0.68
BRCA2-204ENST00000530893 HIGD2AQ9BW72 106 aa10.79□□□□□ -0.68
BRCA2-204ENST00000530893 CHTF8P0CG12 524 aa10.77□□□□□ -0.69
BRCA2-204ENST00000530893 IGFL1Q6UW32 110 aa10.77□□□□□ -0.69
BRCA2-204ENST00000530893 Q6ZRN7 208 aaPredicted RBP10.77□□□□□ -0.69
BRCA2-204ENST00000530893 PHF5AQ7RTV0 110 aaKnown RBP10.77□□□□□ -0.69
BRCA2-204ENST00000530893 OCR1Q9BZK8 76 aa10.77□□□□□ -0.69
BRCA2-204ENST00000530893 DNHD1Q96M86 4753 aa10.75□□□□□ -0.69
BRCA2-204ENST00000530893 SPRR1BP22528 89 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms