RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 TTTY13Q9BZ97 58 aa3.05□□□□□ -1.92
SSBP3-213ENST00000530618 TMEM126AQ9H061 195 aa3.05□□□□□ -1.92
SSBP3-213ENST00000530618 PLAC8Q9NZF1 115 aa3.05□□□□□ -1.92
SSBP3-213ENST00000530618 LPAP08519 4548 aa3.04□□□□□ -1.92
SSBP3-213ENST00000530618 IGLV5-37A0A075B6J1 123 aa3.04□□□□□ -1.92
SSBP3-213ENST00000530618 A0A1B0GV90 55 aa3.04□□□□□ -1.92
SSBP3-213ENST00000530618 NPC2P61916 151 aa3.04□□□□□ -1.92
SSBP3-213ENST00000530618 Q1RN00 199 aa3.04□□□□□ -1.92
SSBP3-213ENST00000530618 LINC01620Q4KN68 170 aa3.04□□□□□ -1.92
SSBP3-213ENST00000530618 LYRM7Q5U5X0 104 aa3.04□□□□□ -1.92
SSBP3-213ENST00000530618 MUSTN1Q8IVN3 82 aa3.04□□□□□ -1.92
SSBP3-213ENST00000530618 CEND1Q8N111 149 aa3.04□□□□□ -1.92
SSBP3-213ENST00000530618 C22orf24Q9Y442 160 aa3.04□□□□□ -1.92
SSBP3-213ENST00000530618 ETDCA0A1B0GVM5 59 aa3.03□□□□□ -1.92
SSBP3-213ENST00000530618 KRTAP9-7A8MTY7 169 aa3.03□□□□□ -1.92
SSBP3-213ENST00000530618 PRYO14603 147 aa3.03□□□□□ -1.92
SSBP3-213ENST00000530618 NCR3O14931 201 aa3.03□□□□□ -1.92
SSBP3-213ENST00000530618 GHRHP01286 108 aa3.03□□□□□ -1.92
SSBP3-213ENST00000530618 COX6CP09669 75 aa3.03□□□□□ -1.92
SSBP3-213ENST00000530618 CHTF8P0CG12 524 aa3.03□□□□□ -1.92
SSBP3-213ENST00000530618 VPREB1P12018 145 aa3.03□□□□□ -1.92
SSBP3-213ENST00000530618 C9orf129Q5T035 196 aaKnown RBP3.03□□□□□ -1.92
SSBP3-213ENST00000530618 SCXQ7RTU7 201 aa3.03□□□□□ -1.92
SSBP3-213ENST00000530618 CIRBP-AS1Q8TBR5 109 aa3.03□□□□□ -1.92
SSBP3-213ENST00000530618 LITAFQ99732 161 aa3.03□□□□□ -1.92
SSBP3-213ENST00000530618 PRO1933Q9H354 126 aa3.03□□□□□ -1.92
SSBP3-213ENST00000530618 NHP2Q9NX24 153 aaKnown RBP3.03□□□□□ -1.92
SSBP3-213ENST00000530618 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.03□□□□□ -1.92
SSBP3-213ENST00000530618 TRAV23DV6A0A075B6W5 121 aa3.02□□□□□ -1.93
SSBP3-213ENST00000530618 A0A0B4J2C4 111 aa3.02□□□□□ -1.93
SSBP3-213ENST00000530618 A4D1N5 150 aa3.02□□□□□ -1.93
SSBP3-213ENST00000530618 GAGE10A6NGK3 116 aa3.02□□□□□ -1.93
SSBP3-213ENST00000530618 KRTAP29-1A8MX34 341 aaPredicted RBP3.02□□□□□ -1.93
SSBP3-213ENST00000530618 SLC25A20O43772 301 aa3.02□□□□□ -1.93
SSBP3-213ENST00000530618 RPL28P46779 137 aaKnown RBP3.02□□□□□ -1.93
SSBP3-213ENST00000530618 UBE2AP49459 152 aa3.02□□□□□ -1.93
SSBP3-213ENST00000530618 RPL37AP61513 92 aaKnown RBP3.02□□□□□ -1.93
SSBP3-213ENST00000530618 BVES-AS1Q5T3Y7 98 aa3.02□□□□□ -1.93
SSBP3-213ENST00000530618 ADAMTSL4-AS1Q5T5F5 129 aa3.02□□□□□ -1.93
SSBP3-213ENST00000530618 REG3GQ6UW15 175 aa3.02□□□□□ -1.93
SSBP3-213ENST00000530618 DIRC1Q969H9 104 aa3.02□□□□□ -1.93
SSBP3-213ENST00000530618 IGKV2-28A0A075B6P5 120 aa3.01□□□□□ -1.93
SSBP3-213ENST00000530618 A0A1W2PNN7 141 aa3.01□□□□□ -1.93
SSBP3-213ENST00000530618 BCE1O60756 84 aa3.01□□□□□ -1.93
SSBP3-213ENST00000530618 IGKV2D-28P01615 120 aa3.01□□□□□ -1.93
SSBP3-213ENST00000530618 RPL13AP40429 203 aaKnown RBP3.01□□□□□ -1.93
SSBP3-213ENST00000530618 PSMB2P49721 201 aa3.01□□□□□ -1.93
SSBP3-213ENST00000530618 SERTAD4-AS1Q5TG53 156 aa3.01□□□□□ -1.93
SSBP3-213ENST00000530618 C2orf91Q6ZV80 131 aa3.01□□□□□ -1.93
SSBP3-213ENST00000530618 PHF5AQ7RTV0 110 aaKnown RBP3.01□□□□□ -1.93
SSBP3-213ENST00000530618 LINC00528Q8N1L1 170 aa3.01□□□□□ -1.93
SSBP3-213ENST00000530618 LINC00167Q96N53 147 aa3.01□□□□□ -1.93
SSBP3-213ENST00000530618 PRO1854Q9UHT4 67 aa3.01□□□□□ -1.93
SSBP3-213ENST00000530618 ZNF706Q9Y5V0 76 aaPredicted RBP3.01□□□□□ -1.93
SSBP3-213ENST00000530618 IGLV1-50A0A075B6I6 118 aa3□□□□□ -1.93
SSBP3-213ENST00000530618 TRBV10-3A0A0K0K1G6 114 aa3□□□□□ -1.93
SSBP3-213ENST00000530618 A0A1B0GWB2 263 aa3□□□□□ -1.93
SSBP3-213ENST00000530618 FAM168BA1KXE4 195 aa3□□□□□ -1.93
SSBP3-213ENST00000530618 RPL37AP8A6NKH3 93 aa3□□□□□ -1.93
SSBP3-213ENST00000530618 ZNF73O43830 326 aaPredicted RBP3□□□□□ -1.93
SSBP3-213ENST00000530618 IGLV6-57P01721 117 aa3□□□□□ -1.93
SSBP3-213ENST00000530618 BATFQ16520 125 aa3□□□□□ -1.93
SSBP3-213ENST00000530618 C1orf137Q5JT78 98 aa3□□□□□ -1.93
SSBP3-213ENST00000530618 COL5A1-AS1Q5SY13 56 aa3□□□□□ -1.93
SSBP3-213ENST00000530618 SOSTDC1Q6X4U4 206 aa3□□□□□ -1.93
SSBP3-213ENST00000530618 FAM19A1Q7Z5A9 133 aa3□□□□□ -1.93
SSBP3-213ENST00000530618 SNHG12Q9BXW3 62 aa3□□□□□ -1.93
SSBP3-213ENST00000530618 KCNQ1DNQ9H478 68 aa3□□□□□ -1.93
SSBP3-213ENST00000530618 DHRS4-AS1Q9P1J3 65 aa3□□□□□ -1.93
SSBP3-213ENST00000530618 TRBV7-6A0A0J9YX20 115 aa2.99□□□□□ -1.93
SSBP3-213ENST00000530618 H0YGX0 51 aa2.99□□□□□ -1.93
SSBP3-213ENST00000530618 H3BQ85 93 aa2.99□□□□□ -1.93
SSBP3-213ENST00000530618 H7C2G1 150 aa2.99□□□□□ -1.93
SSBP3-213ENST00000530618 DNAL4O96015 105 aa2.99□□□□□ -1.93
SSBP3-213ENST00000530618 SCGB1C2P0DMR2 95 aa2.99□□□□□ -1.93
SSBP3-213ENST00000530618 LINC00337Q8N6G1 96 aa2.99□□□□□ -1.93
SSBP3-213ENST00000530618 H0Y9J4 135 aa2.98□□□□□ -1.93
SSBP3-213ENST00000530618 PANO1I0J062 215 aa2.98□□□□□ -1.93
SSBP3-213ENST00000530618 CFC1BP0CG36 223 aa2.98□□□□□ -1.93
SSBP3-213ENST00000530618 CFC1P0CG37 223 aa2.98□□□□□ -1.93
SSBP3-213ENST00000530618 MT1HL1P0DM35 61 aa2.98□□□□□ -1.93
SSBP3-213ENST00000530618 COX7BP24311 80 aa2.98□□□□□ -1.93
SSBP3-213ENST00000530618 FXYD2P54710 66 aa2.98□□□□□ -1.93
SSBP3-213ENST00000530618 PRR3P79522 188 aaKnown RBP2.98□□□□□ -1.93
SSBP3-213ENST00000530618 C6orf99Q4VX62 202 aa2.98□□□□□ -1.93
SSBP3-213ENST00000530618 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
SSBP3-213ENST00000530618 KRTAP9-3Q9BYQ3 159 aa2.98□□□□□ -1.93
SSBP3-213ENST00000530618 PSORS1C2Q9UIG4 136 aa2.98□□□□□ -1.93
SSBP3-213ENST00000530618 A0A1B0GX51 115 aa2.97□□□□□ -1.93
SSBP3-213ENST00000530618 ZNF861PO60384 105 aa2.97□□□□□ -1.93
SSBP3-213ENST00000530618 IGLV7-43P04211 117 aa2.97□□□□□ -1.93
SSBP3-213ENST00000530618 OCIAD2Q56VL3 154 aa2.97□□□□□ -1.93
SSBP3-213ENST00000530618 SPINK6Q6UWN8 80 aa2.97□□□□□ -1.93
SSBP3-213ENST00000530618 Q6ZRX8 168 aa2.97□□□□□ -1.93
SSBP3-213ENST00000530618 SMIM11BQ8TCY0 68 aa2.97□□□□□ -1.93
SSBP3-213ENST00000530618 MUC17Q685J3 4493 aa2.97□□□□□ -1.93
SSBP3-213ENST00000530618 MUC2Q02817 5179 aa2.96□□□□□ -1.93
SSBP3-213ENST00000530618 TRBV20-1A0A075B6N2 111 aa2.96□□□□□ -1.94
SSBP3-213ENST00000530618 J3QL48 77 aa2.96□□□□□ -1.94
SSBP3-213ENST00000530618 SPRR1AP35321 89 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms