RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 ATP11AUNQ6ZP68 121 aa5.74□□□□□ -1.49
CTNND1-225ENST00000530094 J3QL48 77 aa5.73□□□□□ -1.49
CTNND1-225ENST00000530094 PSPHP1O15172 72 aa5.73□□□□□ -1.49
CTNND1-225ENST00000530094 Q6ZQT0 140 aa5.73□□□□□ -1.49
CTNND1-225ENST00000530094 BAHCC1Q9P281 2608 aa5.72□□□□□ -1.49
CTNND1-225ENST00000530094 TRAV22A0A0B4J277 110 aa5.72□□□□□ -1.49
CTNND1-225ENST00000530094 MUC4Q99102 2169 aa5.72□□□□□ -1.49
CTNND1-225ENST00000530094 TRBV7-4A0A0J9YYF1 115 aa5.72□□□□□ -1.49
CTNND1-225ENST00000530094 LOC101927531A0A1B0GV80 90 aa5.72□□□□□ -1.49
CTNND1-225ENST00000530094 SPAG11AQ6PDA7 123 aa5.71□□□□□ -1.5
CTNND1-225ENST00000530094 IGSF10Q6WRI0 2623 aa5.69□□□□□ -1.5
CTNND1-225ENST00000530094 Q96NJ1 140 aa5.69□□□□□ -1.5
CTNND1-225ENST00000530094 Q9UF83 564 aa5.69□□□□□ -1.5
CTNND1-225ENST00000530094 CFAP54Q96N23 3096 aa5.68□□□□□ -1.5
CTNND1-225ENST00000530094 CHTF8P0CG12 524 aa5.68□□□□□ -1.5
CTNND1-225ENST00000530094 ST20-AS1Q8NBB2 130 aa5.68□□□□□ -1.5
CTNND1-225ENST00000530094 SETXQ7Z333 2677 aaKnown RBP5.68□□□□□ -1.5
CTNND1-225ENST00000530094 A8MWP4 228 aa5.68□□□□□ -1.5
CTNND1-225ENST00000530094 IGLV6-57P01721 117 aa5.68□□□□□ -1.5
CTNND1-225ENST00000530094 COL6A3P12111 3177 aa5.67□□□□□ -1.5
CTNND1-225ENST00000530094 VPREB1P12018 145 aa5.67□□□□□ -1.5
CTNND1-225ENST00000530094 C19orf73Q9NVV2 129 aa5.67□□□□□ -1.5
CTNND1-225ENST00000530094 LINC00336Q6ZUF6 198 aa5.67□□□□□ -1.5
CTNND1-225ENST00000530094 CDIP1Q9H305 208 aa5.67□□□□□ -1.5
CTNND1-225ENST00000530094 FAM218AQ96MZ4 157 aa5.66□□□□□ -1.5
CTNND1-225ENST00000530094 IGLV1-50A0A075B6I6 118 aa5.66□□□□□ -1.5
CTNND1-225ENST00000530094 TNRC18O15417 2968 aaPredicted RBP5.66□□□□□ -1.5
CTNND1-225ENST00000530094 SSBP3-AS1Q7Z2R9 100 aa5.66□□□□□ -1.5
CTNND1-225ENST00000530094 KCNQ1DNQ9H478 68 aa5.66□□□□□ -1.5
CTNND1-225ENST00000530094 MRPL34Q9BQ48 92 aaKnown RBP5.65□□□□□ -1.5
CTNND1-225ENST00000530094 CSNK1G2-AS1Q8NCQ2 148 aa5.65□□□□□ -1.51
CTNND1-225ENST00000530094 ERC2-IT1O76042 136 aa5.64□□□□□ -1.51
CTNND1-225ENST00000530094 PLA2G2DQ9UNK4 145 aa5.64□□□□□ -1.51
CTNND1-225ENST00000530094 LINC00304Q8N9R0 145 aa5.64□□□□□ -1.51
CTNND1-225ENST00000530094 CR1P17927 2039 aa5.63□□□□□ -1.51
CTNND1-225ENST00000530094 VPS13AQ96RL7 3174 aa5.63□□□□□ -1.51
CTNND1-225ENST00000530094 CHD6Q8TD26 2715 aa5.62□□□□□ -1.51
CTNND1-225ENST00000530094 TLX1NBP0CAT3 122 aa5.62□□□□□ -1.51
CTNND1-225ENST00000530094 RPS28P62857 69 aaKnown RBP5.62□□□□□ -1.51
CTNND1-225ENST00000530094 COX6B2Q6YFQ2 88 aa5.62□□□□□ -1.51
CTNND1-225ENST00000530094 ZNF861PO60384 105 aa5.62□□□□□ -1.51
CTNND1-225ENST00000530094 PRR34Q9NV39 138 aa5.62□□□□□ -1.51
CTNND1-225ENST00000530094 UNC79Q9P2D8 2635 aa5.61□□□□□ -1.51
CTNND1-225ENST00000530094 SMCPP49901 116 aaPredicted RBP5.61□□□□□ -1.51
CTNND1-225ENST00000530094 PRO0461Q9UI25 63 aa5.61□□□□□ -1.51
CTNND1-225ENST00000530094 TM2D3Q9BRN9 247 aa5.6□□□□□ -1.51
CTNND1-225ENST00000530094 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
CTNND1-225ENST00000530094 GIG44P09565 113 aaPredicted RBP5.6□□□□□ -1.51
CTNND1-225ENST00000530094 SERTAD4-AS1Q5TG53 156 aa5.6□□□□□ -1.51
CTNND1-225ENST00000530094 LINC00612Q8N6U2 182 aa5.6□□□□□ -1.51
CTNND1-225ENST00000530094 LITAFQ99732 161 aa5.6□□□□□ -1.51
CTNND1-225ENST00000530094 A0A087WTM6 91 aa5.59□□□□□ -1.51
CTNND1-225ENST00000530094 TEX15Q9BXT5 2789 aa5.59□□□□□ -1.51
CTNND1-225ENST00000530094 FAM168BA1KXE4 195 aa5.59□□□□□ -1.51
CTNND1-225ENST00000530094 LINC00528Q8N1L1 170 aa5.59□□□□□ -1.51
CTNND1-225ENST00000530094 C8orf17Q9NRJ1 99 aa5.57□□□□□ -1.52
CTNND1-225ENST00000530094 C15orf56Q8N910 161 aa5.57□□□□□ -1.52
CTNND1-225ENST00000530094 COL6A5A8TX70 2615 aa5.57□□□□□ -1.52
CTNND1-225ENST00000530094 C9orf163Q8N9P6 203 aa5.57□□□□□ -1.52
CTNND1-225ENST00000530094 A0A1B0GVX0 72 aa5.57□□□□□ -1.52
CTNND1-225ENST00000530094 IGFL1Q6UW32 110 aa5.56□□□□□ -1.52
CTNND1-225ENST00000530094 STAB1Q9NY15 2570 aa5.56□□□□□ -1.52
CTNND1-225ENST00000530094 MAP1AP78559 2803 aaPredicted RBP5.56□□□□□ -1.52
CTNND1-225ENST00000530094 CYP4F30PQ9H0H9 118 aa5.56□□□□□ -1.52
CTNND1-225ENST00000530094 VCANP13611 3396 aa5.56□□□□□ -1.52
CTNND1-225ENST00000530094 PRR15Q8IV56 129 aa5.56□□□□□ -1.52
CTNND1-225ENST00000530094 RBM12B-AS1Q9P1G2 102 aa5.56□□□□□ -1.52
CTNND1-225ENST00000530094 K7EQZ3 153 aa5.55□□□□□ -1.52
CTNND1-225ENST00000530094 LAMA1P25391 3075 aa5.55□□□□□ -1.52
CTNND1-225ENST00000530094 IGLV7-43P04211 117 aa5.55□□□□□ -1.52
CTNND1-225ENST00000530094 CNBPP62633 177 aaKnown RBP5.55□□□□□ -1.52
CTNND1-225ENST00000530094 DSCR10P59022 87 aa5.54□□□□□ -1.52
CTNND1-225ENST00000530094 ZNF575Q86XF7 245 aa5.54□□□□□ -1.52
CTNND1-225ENST00000530094 APLNQ9ULZ1 77 aa5.54□□□□□ -1.52
CTNND1-225ENST00000530094 COA5Q86WW8 74 aa5.53□□□□□ -1.52
CTNND1-225ENST00000530094 UQCR11O14957 56 aa5.53□□□□□ -1.52
CTNND1-225ENST00000530094 GCN1Q92616 2671 aaKnown RBP5.53□□□□□ -1.52
CTNND1-225ENST00000530094 SPINT4Q6UDR6 99 aa5.53□□□□□ -1.52
CTNND1-225ENST00000530094 FRYLO94915 3013 aa5.53□□□□□ -1.52
CTNND1-225ENST00000530094 CELSR3Q9NYQ7 3312 aa5.53□□□□□ -1.52
CTNND1-225ENST00000530094 C9orf129Q5T035 196 aaKnown RBP5.52□□□□□ -1.53
CTNND1-225ENST00000530094 LINC01600Q96MT4 127 aa5.52□□□□□ -1.53
CTNND1-225ENST00000530094 OBSCN-AS1Q96MR7 158 aa5.51□□□□□ -1.53
CTNND1-225ENST00000530094 Q8N377 158 aa5.5□□□□□ -1.53
CTNND1-225ENST00000530094 SPRR4Q96PI1 79 aa5.5□□□□□ -1.53
CTNND1-225ENST00000530094 IGLV5-37A0A075B6J1 123 aa5.49□□□□□ -1.53
CTNND1-225ENST00000530094 FRYQ5TBA9 3013 aa5.49□□□□□ -1.53
CTNND1-225ENST00000530094 IGLV8-61A0A075B6I0 122 aa5.49□□□□□ -1.53
CTNND1-225ENST00000530094 CRIPTQ9P021 101 aa5.49□□□□□ -1.53
CTNND1-225ENST00000530094 C9orf92A6NGG3 77 aa5.48□□□□□ -1.53
CTNND1-225ENST00000530094 CD164Q04900 197 aa5.48□□□□□ -1.53
CTNND1-225ENST00000530094 DMXL2Q8TDJ6 3036 aa5.48□□□□□ -1.53
CTNND1-225ENST00000530094 PSORS1C2Q9UIG4 136 aa5.47□□□□□ -1.53
CTNND1-225ENST00000530094 FLNCQ14315 2725 aa5.47□□□□□ -1.53
CTNND1-225ENST00000530094 EYSQ5T1H1 3165 aa5.47□□□□□ -1.53
CTNND1-225ENST00000530094 SMR3BP02814 79 aaPredicted RBP5.47□□□□□ -1.53
CTNND1-225ENST00000530094 MIR22HGQ0VDD5 57 aa5.45□□□□□ -1.54
CTNND1-225ENST00000530094 DNAH14Q0VDD8 3507 aa5.45□□□□□ -1.54
CTNND1-225ENST00000530094 C4orf26Q17RF5 130 aa5.45□□□□□ -1.54
CTNND1-225ENST00000530094 CASC10Q5T4H9 136 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms