RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PCP2Q8IVA1 136 aa7.54□□□□□ -1.2
CCDC90B-216ENST00000529856 IGLV6-57P01721 117 aa7.53□□□□□ -1.2
CCDC90B-216ENST00000529856 S100A7L2Q5SY68 101 aa7.53□□□□□ -1.2
CCDC90B-216ENST00000529856 SCGB1D4Q6XE38 83 aa7.53□□□□□ -1.2
CCDC90B-216ENST00000529856 SPANXCQ9NY87 97 aa7.53□□□□□ -1.2
CCDC90B-216ENST00000529856 ETDCA0A1B0GVM5 59 aa7.52□□□□□ -1.21
CCDC90B-216ENST00000529856 HIGD2AQ9BW72 106 aa7.52□□□□□ -1.21
CCDC90B-216ENST00000529856 SPANXDQ9BXN6 97 aa7.52□□□□□ -1.21
CCDC90B-216ENST00000529856 A0A087X002 238 aa7.51□□□□□ -1.21
CCDC90B-216ENST00000529856 HSBP1L1C9JCN9 74 aa7.51□□□□□ -1.21
CCDC90B-216ENST00000529856 SCGB1D1O95968 90 aa7.51□□□□□ -1.21
CCDC90B-216ENST00000529856 CRYGAP11844 174 aa7.51□□□□□ -1.21
CCDC90B-216ENST00000529856 ANAPC11Q9NYG5 84 aa7.51□□□□□ -1.21
CCDC90B-216ENST00000529856 B5MCH6 92 aa7.5□□□□□ -1.21
CCDC90B-216ENST00000529856 FAM229BQ4G0N7 80 aa7.5□□□□□ -1.21
CCDC90B-216ENST00000529856 IFITM1P13164 125 aa7.49□□□□□ -1.21
CCDC90B-216ENST00000529856 Q6ZVH6 145 aa7.49□□□□□ -1.21
CCDC90B-216ENST00000529856 PPDPFQ9H3Y8 114 aa7.49□□□□□ -1.21
CCDC90B-216ENST00000529856 TRAV23DV6A0A075B6W5 121 aa7.48□□□□□ -1.21
CCDC90B-216ENST00000529856 LINC00518Q8N0U6 118 aa7.48□□□□□ -1.21
CCDC90B-216ENST00000529856 SMCR5Q8TEV8 140 aa7.48□□□□□ -1.21
CCDC90B-216ENST00000529856 COPS9Q8WXC6 57 aa7.48□□□□□ -1.21
CCDC90B-216ENST00000529856 KRTAP13-2Q52LG2 175 aa7.47□□□□□ -1.21
CCDC90B-216ENST00000529856 MUSTN1Q8IVN3 82 aa7.47□□□□□ -1.21
CCDC90B-216ENST00000529856 OR13C6PQ8NH95 151 aa7.47□□□□□ -1.21
CCDC90B-216ENST00000529856 TYMSOSQ8TAI1 123 aa7.47□□□□□ -1.21
CCDC90B-216ENST00000529856 SPRR4Q96PI1 79 aa7.47□□□□□ -1.21
CCDC90B-216ENST00000529856 KRTAP9-2Q9BYQ4 174 aa7.47□□□□□ -1.21
CCDC90B-216ENST00000529856 CBY1Q9Y3M2 126 aa7.47□□□□□ -1.21
CCDC90B-216ENST00000529856 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.46□□□□□ -1.22
CCDC90B-216ENST00000529856 ZNF73O43830 326 aaPredicted RBP7.46□□□□□ -1.22
CCDC90B-216ENST00000529856 Q6ZRX8 168 aa7.46□□□□□ -1.22
CCDC90B-216ENST00000529856 ZNF706Q9Y5V0 76 aaPredicted RBP7.46□□□□□ -1.22
CCDC90B-216ENST00000529856 A6NJY4 79 aa7.45□□□□□ -1.22
CCDC90B-216ENST00000529856 Q9BRP9 147 aa7.45□□□□□ -1.22
CCDC90B-216ENST00000529856 ERC2-IT1O76042 136 aa7.44□□□□□ -1.22
CCDC90B-216ENST00000529856 HINT1P49773 126 aaPredicted RBP7.43□□□□□ -1.22
CCDC90B-216ENST00000529856 JOSD1Q15040 202 aaPredicted RBP7.43□□□□□ -1.22
CCDC90B-216ENST00000529856 KRTAP9-6A0A140TA67 174 aa7.42□□□□□ -1.22
CCDC90B-216ENST00000529856 COX8AP10176 69 aa7.42□□□□□ -1.22
CCDC90B-216ENST00000529856 C3orf22Q8N5N4 141 aa7.41□□□□□ -1.22
CCDC90B-216ENST00000529856 DLEU1O43261 78 aa7.4□□□□□ -1.22
CCDC90B-216ENST00000529856 LINC00483Q53H64 154 aa7.4□□□□□ -1.22
CCDC90B-216ENST00000529856 A6NDN8 102 aa7.39□□□□□ -1.23
CCDC90B-216ENST00000529856 TSPAN13O95857 204 aa7.39□□□□□ -1.23
CCDC90B-216ENST00000529856 C6orf99Q4VX62 202 aa7.39□□□□□ -1.23
CCDC90B-216ENST00000529856 GAGE2AQ6NT46 116 aa7.39□□□□□ -1.23
CCDC90B-216ENST00000529856 TRAV13-2A0A0B4J235 113 aa7.38□□□□□ -1.23
CCDC90B-216ENST00000529856 LINC00304Q8N9R0 145 aa7.38□□□□□ -1.23
CCDC90B-216ENST00000529856 PAM16Q9Y3D7 125 aa7.38□□□□□ -1.23
CCDC90B-216ENST00000529856 TRBV7-6A0A0J9YX20 115 aa7.37□□□□□ -1.23
CCDC90B-216ENST00000529856 COX7BP24311 80 aa7.37□□□□□ -1.23
CCDC90B-216ENST00000529856 ELOF1P60002 83 aaKnown RBP7.37□□□□□ -1.23
CCDC90B-216ENST00000529856 SPATA45Q537H7 98 aa7.37□□□□□ -1.23
CCDC90B-216ENST00000529856 C14orf144Q96I85 54 aa7.37□□□□□ -1.23
CCDC90B-216ENST00000529856 VAMP8Q9BV40 100 aa7.37□□□□□ -1.23
CCDC90B-216ENST00000529856 DHRS4-AS1Q9P1J3 65 aa7.37□□□□□ -1.23
CCDC90B-216ENST00000529856 TMA7Q9Y2S6 64 aaKnown RBP7.37□□□□□ -1.23
CCDC90B-216ENST00000529856 A4D1N5 150 aa7.36□□□□□ -1.23
CCDC90B-216ENST00000529856 ST20-AS1Q8NBB2 130 aa7.36□□□□□ -1.23
CCDC90B-216ENST00000529856 CTAG1AP78358 180 aa7.35□□□□□ -1.23
CCDC90B-216ENST00000529856 LRP2P98164 4655 aa7.35□□□□□ -1.23
CCDC90B-216ENST00000529856 HIST1H4GQ99525 98 aa7.35□□□□□ -1.23
CCDC90B-216ENST00000529856 A0A1B0GWB2 263 aa7.34□□□□□ -1.23
CCDC90B-216ENST00000529856 PYY3Q5JQD4 70 aa7.34□□□□□ -1.23
CCDC90B-216ENST00000529856 SMIM11BQ8TCY0 68 aa7.34□□□□□ -1.23
CCDC90B-216ENST00000529856 HIGD1BQ9P298 99 aa7.34□□□□□ -1.23
CCDC90B-216ENST00000529856 SPAG11AQ6PDA7 123 aa7.33□□□□□ -1.24
CCDC90B-216ENST00000529856 SLC25A34Q6PIV7 304 aa7.33□□□□□ -1.24
CCDC90B-216ENST00000529856 IGLV9-49A0A0B4J1Y8 123 aa7.32□□□□□ -1.24
CCDC90B-216ENST00000529856 SPRR1BP22528 89 aa7.32□□□□□ -1.24
CCDC90B-216ENST00000529856 Q8NBF4 154 aa7.32□□□□□ -1.24
CCDC90B-216ENST00000529856 UBR4Q5T4S7 5183 aa7.32□□□□□ -1.24
CCDC90B-216ENST00000529856 MOBPQ13875 183 aa7.31□□□□□ -1.24
CCDC90B-216ENST00000529856 PRR4Q16378 134 aa7.31□□□□□ -1.24
CCDC90B-216ENST00000529856 C2orf91Q6ZV80 131 aa7.31□□□□□ -1.24
CCDC90B-216ENST00000529856 SSBP3-AS1Q7Z2R9 100 aa7.31□□□□□ -1.24
CCDC90B-216ENST00000529856 C12orf57Q99622 126 aa7.29□□□□□ -1.24
CCDC90B-216ENST00000529856 KRTAP4-12Q9BQ66 201 aa7.29□□□□□ -1.24
CCDC90B-216ENST00000529856 LPAP08519 4548 aa7.29□□□□□ -1.24
CCDC90B-216ENST00000529856 VAMP3Q15836 100 aa7.28□□□□□ -1.24
CCDC90B-216ENST00000529856 TAL2Q16559 108 aa7.28□□□□□ -1.24
CCDC90B-216ENST00000529856 CFC1BP0CG36 223 aa7.27□□□□□ -1.25
CCDC90B-216ENST00000529856 CFC1P0CG37 223 aa7.27□□□□□ -1.25
CCDC90B-216ENST00000529856 DEFB105AQ8NG35 78 aa7.27□□□□□ -1.25
CCDC90B-216ENST00000529856 TEX49A0A1B0GTD5 131 aa7.26□□□□□ -1.25
CCDC90B-216ENST00000529856 SPINK1P00995 79 aa7.26□□□□□ -1.25
CCDC90B-216ENST00000529856 C9orf153Q5TBE3 101 aa7.26□□□□□ -1.25
CCDC90B-216ENST00000529856 RETNLBQ9BQ08 111 aa7.26□□□□□ -1.25
CCDC90B-216ENST00000529856 NHP2Q9NX24 153 aaKnown RBP7.26□□□□□ -1.25
CCDC90B-216ENST00000529856 LAMTOR3Q9UHA4 124 aa7.26□□□□□ -1.25
CCDC90B-216ENST00000529856 LINC01547P58512 204 aaPredicted RBP7.25□□□□□ -1.25
CCDC90B-216ENST00000529856 LCE3BQ5TA77 95 aa7.25□□□□□ -1.25
CCDC90B-216ENST00000529856 LINC00575Q6W349 94 aa7.25□□□□□ -1.25
CCDC90B-216ENST00000529856 CEND1Q8N111 149 aa7.25□□□□□ -1.25
CCDC90B-216ENST00000529856 IGLV5-48A0A075B6I7 105 aa7.24□□□□□ -1.25
CCDC90B-216ENST00000529856 SLC25A20O43772 301 aa7.24□□□□□ -1.25
CCDC90B-216ENST00000529856 RAB37Q96AX2 223 aa7.24□□□□□ -1.25
CCDC90B-216ENST00000529856 A0A0B4J2C4 111 aa7.23□□□□□ -1.25
CCDC90B-216ENST00000529856 SMIM29Q86T20 159 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms