RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 KRTDAPP60985 99 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 RBM12B-AS1Q9P1G2 102 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 SERP1Q9Y6X1 66 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 IGLV1-50A0A075B6I6 118 aa2.1□□□□□ -2.07
PTPRC-213ENST00000529828 A0A1B0GXF2 115 aa2.1□□□□□ -2.07
PTPRC-213ENST00000529828 A8MWL6 223 aa2.1□□□□□ -2.07
PTPRC-213ENST00000529828 C8orf87E5RJ46 101 aa2.1□□□□□ -2.07
PTPRC-213ENST00000529828 F2Z2F3 143 aa2.1□□□□□ -2.07
PTPRC-213ENST00000529828 TRIAP1O43715 76 aa2.1□□□□□ -2.07
PTPRC-213ENST00000529828 CXCL5P42830 114 aa2.1□□□□□ -2.07
PTPRC-213ENST00000529828 MRPS36P82909 103 aaKnown RBP2.1□□□□□ -2.07
PTPRC-213ENST00000529828 CENPWQ5EE01 88 aa2.1□□□□□ -2.07
PTPRC-213ENST00000529828 TMEM136Q6ZRR5 245 aa2.1□□□□□ -2.07
PTPRC-213ENST00000529828 TEN1Q86WV5 123 aa2.1□□□□□ -2.07
PTPRC-213ENST00000529828 CAMK2N2Q96S95 79 aa2.1□□□□□ -2.07
PTPRC-213ENST00000529828 RETNLBQ9BQ08 111 aa2.1□□□□□ -2.07
PTPRC-213ENST00000529828 SMIM7Q9BQ49 75 aa2.1□□□□□ -2.07
PTPRC-213ENST00000529828 H3BT86 120 aa2.09□□□□□ -2.07
PTPRC-213ENST00000529828 NPC2P61916 151 aa2.09□□□□□ -2.07
PTPRC-213ENST00000529828 RNASE13Q5GAN3 156 aaKnown RBP2.09□□□□□ -2.07
PTPRC-213ENST00000529828 LYZL1Q6UWQ5 148 aa2.09□□□□□ -2.07
PTPRC-213ENST00000529828 CRCT1Q9UGL9 99 aa2.09□□□□□ -2.07
PTPRC-213ENST00000529828 PRO0461Q9UI25 63 aa2.09□□□□□ -2.07
PTPRC-213ENST00000529828 TRAPPC1Q9Y5R8 145 aa2.09□□□□□ -2.07
PTPRC-213ENST00000529828 E9PLD3 99 aa2.09□□□□□ -2.07
PTPRC-213ENST00000529828 NDUFS5O43920 106 aa2.09□□□□□ -2.07
PTPRC-213ENST00000529828 RIGQ13278 110 aa2.09□□□□□ -2.07
PTPRC-213ENST00000529828 SS18Q15532 418 aa2.09□□□□□ -2.07
PTPRC-213ENST00000529828 C5orf38Q86SI9 138 aa2.09□□□□□ -2.07
PTPRC-213ENST00000529828 KTN1-AS1Q86SY8 53 aa2.09□□□□□ -2.07
PTPRC-213ENST00000529828 BAGE3Q86Y29 109 aa2.09□□□□□ -2.07
PTPRC-213ENST00000529828 GNG13Q9P2W3 67 aa2.09□□□□□ -2.07
PTPRC-213ENST00000529828 SDHAF1A6NFY7 115 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 ATOX1O00244 68 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 COX7A2LO14548 114 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 SERF1AO75920 110 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 C3orf79P0CE67 100 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 RPL23P62829 140 aaKnown RBP2.08□□□□□ -2.08
PTPRC-213ENST00000529828 UBE2BP63146 152 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 SPAG11BQ08648 103 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 TWIST1Q15672 202 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 AMN1Q8IY45 258 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 SMIM27A0A1W2PRY6 76 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 C19orf71A6NCJ1 209 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 COX8AP10176 69 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 KRTAP7-1Q8IUC3 87 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 TSKUQ8WUA8 353 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 CDC42SE2Q9NRR3 84 aa2.08□□□□□ -2.08
PTPRC-213ENST00000529828 A0A087X002 238 aa2.07□□□□□ -2.08
PTPRC-213ENST00000529828 H7C423 109 aa2.07□□□□□ -2.08
PTPRC-213ENST00000529828 NUPR1O60356 82 aa2.07□□□□□ -2.08
PTPRC-213ENST00000529828 TSHBP01222 138 aa2.07□□□□□ -2.08
PTPRC-213ENST00000529828 IGKCP01834 107 aa2.07□□□□□ -2.08
PTPRC-213ENST00000529828 LGALS3P17931 250 aaKnown RBP2.07□□□□□ -2.08
PTPRC-213ENST00000529828 C10orf25Q5T742 122 aa2.07□□□□□ -2.08
PTPRC-213ENST00000529828 Q75L30 129 aa2.07□□□□□ -2.08
PTPRC-213ENST00000529828 CEND1Q8N111 149 aa2.07□□□□□ -2.08
PTPRC-213ENST00000529828 CHCHD1Q96BP2 118 aaKnown RBP2.07□□□□□ -2.08
PTPRC-213ENST00000529828 CNFNQ9BYD5 112 aa2.07□□□□□ -2.08
PTPRC-213ENST00000529828 I3L3M4 83 aa2.07□□□□□ -2.08
PTPRC-213ENST00000529828 TCL1BO95988 128 aa2.07□□□□□ -2.08
PTPRC-213ENST00000529828 SCGB1C2P0DMR2 95 aa2.07□□□□□ -2.08
PTPRC-213ENST00000529828 RPP21Q9H633 154 aaKnown RBP2.07□□□□□ -2.08
PTPRC-213ENST00000529828 ANAPC11Q9NYG5 84 aa2.07□□□□□ -2.08
PTPRC-213ENST00000529828 TRBV20OR9-2A0A075B6H5 130 aa2.06□□□□□ -2.08
PTPRC-213ENST00000529828 LINC01546A6NGU7 62 aa2.06□□□□□ -2.08
PTPRC-213ENST00000529828 ATP5EP56381 51 aaPredicted RBP2.06□□□□□ -2.08
PTPRC-213ENST00000529828 PAPPA-AS1Q5QFB9 102 aa2.06□□□□□ -2.08
PTPRC-213ENST00000529828 UNQ6190/PRO20217Q6UXQ8 127 aa2.06□□□□□ -2.08
PTPRC-213ENST00000529828 PCP2Q8IVA1 136 aa2.06□□□□□ -2.08
PTPRC-213ENST00000529828 DSCR8Q96T75 97 aa2.06□□□□□ -2.08
PTPRC-213ENST00000529828 HIGD1BQ9P298 99 aa2.06□□□□□ -2.08
PTPRC-213ENST00000529828 C6orf48Q9UBA6 75 aa2.06□□□□□ -2.08
PTPRC-213ENST00000529828 TRBV27A0A0K0K1C4 114 aa2.06□□□□□ -2.08
PTPRC-213ENST00000529828 ACYP1P07311 99 aa2.06□□□□□ -2.08
PTPRC-213ENST00000529828 PSMB2P49721 201 aa2.06□□□□□ -2.08
PTPRC-213ENST00000529828 C2orf91Q6ZV80 131 aa2.06□□□□□ -2.08
PTPRC-213ENST00000529828 TYMSOSQ8TAI1 123 aa2.06□□□□□ -2.08
PTPRC-213ENST00000529828 A0A1B0GUT8 65 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 NDUFA1O15239 70 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 ZNF861PO60384 105 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 FCER1GP30273 86 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 HBBP68871 147 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 C9orf129Q5T035 196 aaKnown RBP2.05□□□□□ -2.08
PTPRC-213ENST00000529828 ZC2HC1BQ5TFG8 222 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 Q6ZVQ6 151 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 MRPL35Q9NZE8 188 aaKnown RBP2.05□□□□□ -2.08
PTPRC-213ENST00000529828 UBE2D4Q9Y2X8 147 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 V9GYV3 84 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 IGLV7-46A0A075B6I9 117 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 IGHV3OR16-9A0A0B4J2B5 98 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 TRBV6-5A0A0K0K1A5 114 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 hADV29S1A0JD25 119 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 LINC01547P58512 204 aaPredicted RBP2.05□□□□□ -2.08
PTPRC-213ENST00000529828 KRTAP13-2Q52LG2 175 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 ORMDL2Q53FV1 153 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 LINC00242Q5T6M2 205 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 C2orf82Q6UX34 121 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 SERP2Q8N6R1 65 aa2.05□□□□□ -2.08
PTPRC-213ENST00000529828 TOMM6Q96B49 74 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms