RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 SMCR5Q8TEV8 140 aa9.49□□□□□ -0.89
TSPAN4-218ENST00000529566 S100A12P80511 92 aa9.48□□□□□ -0.89
TSPAN4-218ENST00000529566 PPDPFQ9H3Y8 114 aa9.48□□□□□ -0.89
TSPAN4-218ENST00000529566 TRAV23DV6A0A075B6W5 121 aa9.47□□□□□ -0.89
TSPAN4-218ENST00000529566 SPRR4Q96PI1 79 aa9.47□□□□□ -0.89
TSPAN4-218ENST00000529566 SCGB1D1O95968 90 aa9.46□□□□□ -0.9
TSPAN4-218ENST00000529566 IFITM1P13164 125 aa9.46□□□□□ -0.9
TSPAN4-218ENST00000529566 Q6ZRX8 168 aa9.46□□□□□ -0.9
TSPAN4-218ENST00000529566 Q6ZVH6 145 aa9.46□□□□□ -0.9
TSPAN4-218ENST00000529566 TYMSOSQ8TAI1 123 aa9.46□□□□□ -0.9
TSPAN4-218ENST00000529566 Q9BRP9 147 aa9.46□□□□□ -0.9
TSPAN4-218ENST00000529566 UBR4Q5T4S7 5183 aa9.46□□□□□ -0.9
TSPAN4-218ENST00000529566 HSBP1L1C9JCN9 74 aa9.45□□□□□ -0.9
TSPAN4-218ENST00000529566 ZNF73O43830 326 aaPredicted RBP9.45□□□□□ -0.9
TSPAN4-218ENST00000529566 ERC2-IT1O76042 136 aa9.45□□□□□ -0.9
TSPAN4-218ENST00000529566 MUSTN1Q8IVN3 82 aa9.44□□□□□ -0.9
TSPAN4-218ENST00000529566 LINC00518Q8N0U6 118 aa9.44□□□□□ -0.9
TSPAN4-218ENST00000529566 LRP2P98164 4655 aa9.42□□□□□ -0.9
TSPAN4-218ENST00000529566 OR13C6PQ8NH95 151 aa9.42□□□□□ -0.9
TSPAN4-218ENST00000529566 COPS9Q8WXC6 57 aa9.42□□□□□ -0.9
TSPAN4-218ENST00000529566 ZNF706Q9Y5V0 76 aaPredicted RBP9.42□□□□□ -0.9
TSPAN4-218ENST00000529566 LINC00483Q53H64 154 aa9.41□□□□□ -0.9
TSPAN4-218ENST00000529566 C3orf22Q8N5N4 141 aa9.41□□□□□ -0.9
TSPAN4-218ENST00000529566 CBY1Q9Y3M2 126 aa9.41□□□□□ -0.9
TSPAN4-218ENST00000529566 COX8AP10176 69 aa9.38□□□□□ -0.91
TSPAN4-218ENST00000529566 JOSD1Q15040 202 aaPredicted RBP9.38□□□□□ -0.91
TSPAN4-218ENST00000529566 TSPAN13O95857 204 aa9.37□□□□□ -0.91
TSPAN4-218ENST00000529566 GAGE2AQ6NT46 116 aa9.36□□□□□ -0.91
TSPAN4-218ENST00000529566 DLEU1O43261 78 aa9.35□□□□□ -0.91
TSPAN4-218ENST00000529566 HINT1P49773 126 aaPredicted RBP9.35□□□□□ -0.91
TSPAN4-218ENST00000529566 C6orf99Q4VX62 202 aa9.35□□□□□ -0.91
TSPAN4-218ENST00000529566 LINC00304Q8N9R0 145 aa9.35□□□□□ -0.91
TSPAN4-218ENST00000529566 LPAP08519 4548 aa9.34□□□□□ -0.91
TSPAN4-218ENST00000529566 ELOF1P60002 83 aaKnown RBP9.34□□□□□ -0.91
TSPAN4-218ENST00000529566 TRBV7-6A0A0J9YX20 115 aa9.33□□□□□ -0.92
TSPAN4-218ENST00000529566 A6NDN8 102 aa9.33□□□□□ -0.92
TSPAN4-218ENST00000529566 ST20-AS1Q8NBB2 130 aa9.33□□□□□ -0.92
TSPAN4-218ENST00000529566 TRAV13-2A0A0B4J235 113 aa9.32□□□□□ -0.92
TSPAN4-218ENST00000529566 A4D1N5 150 aa9.32□□□□□ -0.92
TSPAN4-218ENST00000529566 COX7BP24311 80 aa9.32□□□□□ -0.92
TSPAN4-218ENST00000529566 C14orf144Q96I85 54 aa9.32□□□□□ -0.92
TSPAN4-218ENST00000529566 DHRS4-AS1Q9P1J3 65 aa9.32□□□□□ -0.92
TSPAN4-218ENST00000529566 PAM16Q9Y3D7 125 aa9.32□□□□□ -0.92
TSPAN4-218ENST00000529566 SPATA45Q537H7 98 aa9.31□□□□□ -0.92
TSPAN4-218ENST00000529566 CTAG1AP78358 180 aa9.3□□□□□ -0.92
TSPAN4-218ENST00000529566 SMIM11BQ8TCY0 68 aa9.29□□□□□ -0.92
TSPAN4-218ENST00000529566 VAMP8Q9BV40 100 aa9.29□□□□□ -0.92
TSPAN4-218ENST00000529566 TMA7Q9Y2S6 64 aaKnown RBP9.29□□□□□ -0.92
TSPAN4-218ENST00000529566 SPRR1BP22528 89 aa9.28□□□□□ -0.92
TSPAN4-218ENST00000529566 PYY3Q5JQD4 70 aa9.28□□□□□ -0.92
TSPAN4-218ENST00000529566 Q8NBF4 154 aa9.28□□□□□ -0.92
TSPAN4-218ENST00000529566 HIST1H4GQ99525 98 aa9.28□□□□□ -0.92
TSPAN4-218ENST00000529566 A0A1B0GWB2 263 aa9.27□□□□□ -0.93
TSPAN4-218ENST00000529566 PRR4Q16378 134 aa9.27□□□□□ -0.93
TSPAN4-218ENST00000529566 C2orf91Q6ZV80 131 aa9.27□□□□□ -0.93
TSPAN4-218ENST00000529566 HIGD1BQ9P298 99 aa9.27□□□□□ -0.93
TSPAN4-218ENST00000529566 MOBPQ13875 183 aa9.26□□□□□ -0.93
TSPAN4-218ENST00000529566 SPAG11AQ6PDA7 123 aa9.26□□□□□ -0.93
TSPAN4-218ENST00000529566 IGLV9-49A0A0B4J1Y8 123 aa9.25□□□□□ -0.93
TSPAN4-218ENST00000529566 SLC25A34Q6PIV7 304 aa9.25□□□□□ -0.93
TSPAN4-218ENST00000529566 SSBP3-AS1Q7Z2R9 100 aa9.25□□□□□ -0.93
TSPAN4-218ENST00000529566 RETNLBQ9BQ08 111 aa9.23□□□□□ -0.93
TSPAN4-218ENST00000529566 RNF213Q63HN8 5207 aa9.23□□□□□ -0.93
TSPAN4-218ENST00000529566 C12orf57Q99622 126 aa9.22□□□□□ -0.93
TSPAN4-218ENST00000529566 LINC01547P58512 204 aaPredicted RBP9.21□□□□□ -0.94
TSPAN4-218ENST00000529566 C4orf48Q5BLP8 95 aa9.21□□□□□ -0.94
TSPAN4-218ENST00000529566 SPINK1P00995 79 aa9.2□□□□□ -0.94
TSPAN4-218ENST00000529566 CFC1BP0CG36 223 aa9.2□□□□□ -0.94
TSPAN4-218ENST00000529566 CFC1P0CG37 223 aa9.2□□□□□ -0.94
TSPAN4-218ENST00000529566 IGLV5-48A0A075B6I7 105 aa9.19□□□□□ -0.94
TSPAN4-218ENST00000529566 TEX49A0A1B0GTD5 131 aa9.18□□□□□ -0.94
TSPAN4-218ENST00000529566 TAL2Q16559 108 aa9.18□□□□□ -0.94
TSPAN4-218ENST00000529566 C9orf153Q5TBE3 101 aa9.18□□□□□ -0.94
TSPAN4-218ENST00000529566 LINC00575Q6W349 94 aa9.18□□□□□ -0.94
TSPAN4-218ENST00000529566 SMIM29Q86T20 159 aa9.18□□□□□ -0.94
TSPAN4-218ENST00000529566 DEFB105AQ8NG35 78 aa9.18□□□□□ -0.94
TSPAN4-218ENST00000529566 VAMP3Q15836 100 aa9.17□□□□□ -0.94
TSPAN4-218ENST00000529566 RPS29P62273 56 aaKnown RBP9.16□□□□□ -0.94
TSPAN4-218ENST00000529566 CEND1Q8N111 149 aa9.16□□□□□ -0.94
TSPAN4-218ENST00000529566 NHP2Q9NX24 153 aaKnown RBP9.16□□□□□ -0.94
TSPAN4-218ENST00000529566 LAMTOR3Q9UHA4 124 aa9.16□□□□□ -0.94
TSPAN4-218ENST00000529566 Q8N377 158 aa9.15□□□□□ -0.94
TSPAN4-218ENST00000529566 A0A0B4J2C4 111 aa9.14□□□□□ -0.95
TSPAN4-218ENST00000529566 Q1RN00 199 aa9.14□□□□□ -0.95
TSPAN4-218ENST00000529566 IGLV7-46A0A075B6I9 117 aa9.13□□□□□ -0.95
TSPAN4-218ENST00000529566 SLC25A20O43772 301 aa9.12□□□□□ -0.95
TSPAN4-218ENST00000529566 FXYD2P54710 66 aa9.12□□□□□ -0.95
TSPAN4-218ENST00000529566 RAB37Q96AX2 223 aa9.12□□□□□ -0.95
TSPAN4-218ENST00000529566 hADV29S1A0JD25 119 aa9.11□□□□□ -0.95
TSPAN4-218ENST00000529566 H7C2G1 150 aa9.11□□□□□ -0.95
TSPAN4-218ENST00000529566 TPRXLQ17RH7 258 aa9.1□□□□□ -0.95
TSPAN4-218ENST00000529566 BVES-AS1Q5T3Y7 98 aa9.1□□□□□ -0.95
TSPAN4-218ENST00000529566 FP248Q71RG6 208 aaPredicted RBP9.1□□□□□ -0.95
TSPAN4-218ENST00000529566 Q6ZQY7 126 aa9.09□□□□□ -0.95
TSPAN4-218ENST00000529566 TMEM238LA0A1B0GVL6 79 aa9.07□□□□□ -0.96
TSPAN4-218ENST00000529566 A6NJY4 79 aa9.07□□□□□ -0.96
TSPAN4-218ENST00000529566 HSD52Q0P140 79 aa9.07□□□□□ -0.96
TSPAN4-218ENST00000529566 PRO1933Q9H354 126 aa9.07□□□□□ -0.96
TSPAN4-218ENST00000529566 UQCR10Q9UDW1 63 aa9.07□□□□□ -0.96
TSPAN4-218ENST00000529566 PRO1854Q9UHT4 67 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms