RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 FAM168BA1KXE4 195 aa3.87□□□□□ -1.79
MACF1-228ENST00000528611 A6NDN8 102 aa3.87□□□□□ -1.79
MACF1-228ENST00000528611 IGKV2D-28P01615 120 aa3.87□□□□□ -1.79
MACF1-228ENST00000528611 INAFM2P0DMQ5 153 aa3.87□□□□□ -1.79
MACF1-228ENST00000528611 FUSP35637 526 aaKnown RBP eCLIP3.87□□□□□ -1.79
MACF1-228ENST00000528611 UBE2BP63146 152 aa3.87□□□□□ -1.79
MACF1-228ENST00000528611 PRO1854Q9UHT4 67 aa3.87□□□□□ -1.79
MACF1-228ENST00000528611 LRP1BQ9NZR2 4599 aa3.87□□□□□ -1.79
MACF1-228ENST00000528611 DYNC1H1Q14204 4646 aaKnown RBP3.86□□□□□ -1.79
MACF1-228ENST00000528611 TRAV23DV6A0A075B6W5 121 aa3.86□□□□□ -1.79
MACF1-228ENST00000528611 EIF4EBP3O60516 100 aaPredicted RBP3.86□□□□□ -1.79
MACF1-228ENST00000528611 BCE1O60756 84 aa3.86□□□□□ -1.79
MACF1-228ENST00000528611 CFC1BP0CG36 223 aa3.86□□□□□ -1.79
MACF1-228ENST00000528611 CFC1P0CG37 223 aa3.86□□□□□ -1.79
MACF1-228ENST00000528611 RPL28P46779 137 aaKnown RBP3.86□□□□□ -1.79
MACF1-228ENST00000528611 VAMP3Q15836 100 aa3.86□□□□□ -1.79
MACF1-228ENST00000528611 BVES-AS1Q5T3Y7 98 aa3.86□□□□□ -1.79
MACF1-228ENST00000528611 REG3GQ6UW15 175 aa3.86□□□□□ -1.79
MACF1-228ENST00000528611 PHF5AQ7RTV0 110 aaKnown RBP3.86□□□□□ -1.79
MACF1-228ENST00000528611 Q8N1X5 172 aa3.86□□□□□ -1.79
MACF1-228ENST00000528611 RAB37Q96AX2 223 aa3.86□□□□□ -1.79
MACF1-228ENST00000528611 PRO1933Q9H354 126 aa3.86□□□□□ -1.79
MACF1-228ENST00000528611 DNAH8Q96JB1 4490 aa3.86□□□□□ -1.79
MACF1-228ENST00000528611 TRBV10-3A0A0K0K1G6 114 aa3.85□□□□□ -1.79
MACF1-228ENST00000528611 KRTAP4-16G5E9R7 235 aaPredicted RBP3.85□□□□□ -1.79
MACF1-228ENST00000528611 H0YGX0 51 aa3.85□□□□□ -1.79
MACF1-228ENST00000528611 ZNF73O43830 326 aaPredicted RBP3.85□□□□□ -1.79
MACF1-228ENST00000528611 SNCGO76070 127 aa3.85□□□□□ -1.79
MACF1-228ENST00000528611 NPC2P61916 151 aa3.85□□□□□ -1.79
MACF1-228ENST00000528611 CTAG1AP78358 180 aa3.85□□□□□ -1.79
MACF1-228ENST00000528611 Q8NDZ9 215 aa3.85□□□□□ -1.79
MACF1-228ENST00000528611 OR13C6PQ8NH95 151 aa3.85□□□□□ -1.79
MACF1-228ENST00000528611 DIRC1Q969H9 104 aa3.85□□□□□ -1.79
MACF1-228ENST00000528611 NHP2Q9NX24 153 aaKnown RBP3.85□□□□□ -1.79
MACF1-228ENST00000528611 PSORS1C2Q9UIG4 136 aa3.85□□□□□ -1.79
MACF1-228ENST00000528611 A0A1B0GX51 115 aa3.84□□□□□ -1.79
MACF1-228ENST00000528611 NCR3O14931 201 aa3.84□□□□□ -1.79
MACF1-228ENST00000528611 ZNF861PO60384 105 aa3.84□□□□□ -1.79
MACF1-228ENST00000528611 IGLV7-43P04211 117 aa3.84□□□□□ -1.79
MACF1-228ENST00000528611 COX6CP09669 75 aa3.84□□□□□ -1.79
MACF1-228ENST00000528611 FXYD2P54710 66 aa3.84□□□□□ -1.79
MACF1-228ENST00000528611 RPL37AP61513 92 aaKnown RBP3.84□□□□□ -1.79
MACF1-228ENST00000528611 PRR3P79522 188 aaKnown RBP3.84□□□□□ -1.79
MACF1-228ENST00000528611 SPINK6Q6UWN8 80 aa3.84□□□□□ -1.79
MACF1-228ENST00000528611 ETDCA0A1B0GVM5 59 aa3.83□□□□□ -1.8
MACF1-228ENST00000528611 RPL37AP8A6NKH3 93 aa3.83□□□□□ -1.8
MACF1-228ENST00000528611 H3BQ85 93 aa3.83□□□□□ -1.8
MACF1-228ENST00000528611 ELOF1P60002 83 aaKnown RBP3.83□□□□□ -1.8
MACF1-228ENST00000528611 C1orf137Q5JT78 98 aa3.83□□□□□ -1.8
MACF1-228ENST00000528611 Q6ZRX8 168 aa3.83□□□□□ -1.8
MACF1-228ENST00000528611 KRTAP13-1Q8IUC0 172 aa3.83□□□□□ -1.8
MACF1-228ENST00000528611 DHRS4-AS1Q9P1J3 65 aa3.83□□□□□ -1.8
MACF1-228ENST00000528611 GAGE10A6NGK3 116 aa3.82□□□□□ -1.8
MACF1-228ENST00000528611 B5MCH6 92 aa3.82□□□□□ -1.8
MACF1-228ENST00000528611 SLC25A20O43772 301 aa3.82□□□□□ -1.8
MACF1-228ENST00000528611 C6orf99Q4VX62 202 aa3.82□□□□□ -1.8
MACF1-228ENST00000528611 OCIAD2Q56VL3 154 aa3.82□□□□□ -1.8
MACF1-228ENST00000528611 LYRM7Q5U5X0 104 aa3.82□□□□□ -1.8
MACF1-228ENST00000528611 SMIM11BQ8TCY0 68 aa3.82□□□□□ -1.8
MACF1-228ENST00000528611 ZNF706Q9Y5V0 76 aaPredicted RBP3.82□□□□□ -1.8
MACF1-228ENST00000528611 APOBP04114 4563 aaKnown RBP3.82□□□□□ -1.8
MACF1-228ENST00000528611 COX7BP24311 80 aa3.81□□□□□ -1.8
MACF1-228ENST00000528611 RPL13AP40429 203 aaKnown RBP3.81□□□□□ -1.8
MACF1-228ENST00000528611 UBE2AP49459 152 aa3.81□□□□□ -1.8
MACF1-228ENST00000528611 KRTAP10-4P60372 401 aaPredicted RBP3.81□□□□□ -1.8
MACF1-228ENST00000528611 Q5VSD8 79 aa3.81□□□□□ -1.8
MACF1-228ENST00000528611 PPDPFLQ8WWR9 84 aa3.81□□□□□ -1.8
MACF1-228ENST00000528611 EPPK1P58107 5090 aaKnown RBP3.8□□□□□ -1.8
MACF1-228ENST00000528611 COL5A1-AS1Q5SY13 56 aa3.8□□□□□ -1.8
MACF1-228ENST00000528611 FAM19A1Q7Z5A9 133 aa3.8□□□□□ -1.8
MACF1-228ENST00000528611 TRBV20-1A0A075B6N2 111 aa3.79□□□□□ -1.8
MACF1-228ENST00000528611 SMR3BP02814 79 aaPredicted RBP3.79□□□□□ -1.8
MACF1-228ENST00000528611 Q1RN00 199 aa3.79□□□□□ -1.8
MACF1-228ENST00000528611 FAM229BQ4G0N7 80 aa3.79□□□□□ -1.8
MACF1-228ENST00000528611 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.79□□□□□ -1.8
MACF1-228ENST00000528611 LINC00575Q6W349 94 aa3.79□□□□□ -1.8
MACF1-228ENST00000528611 KRTAP11-1Q8IUC1 163 aa3.79□□□□□ -1.8
MACF1-228ENST00000528611 hADV29S1A0JD25 119 aa3.78□□□□□ -1.8
MACF1-228ENST00000528611 TSPAN13O95857 204 aa3.78□□□□□ -1.8
MACF1-228ENST00000528611 PSMB2P49721 201 aa3.78□□□□□ -1.8
MACF1-228ENST00000528611 HSPG2P98160 4391 aa3.78□□□□□ -1.8
MACF1-228ENST00000528611 BIRC6Q9NR09 4857 aa3.77□□□□□ -1.81
MACF1-228ENST00000528611 RYR1P21817 5038 aa3.77□□□□□ -1.81
MACF1-228ENST00000528611 VPS13BQ7Z7G8 4022 aa3.77□□□□□ -1.81
MACF1-228ENST00000528611 IGLV5-48A0A075B6I7 105 aa3.77□□□□□ -1.81
MACF1-228ENST00000528611 C9orf118A6NHY6 69 aa3.77□□□□□ -1.81
MACF1-228ENST00000528611 OXTP01178 125 aa3.77□□□□□ -1.81
MACF1-228ENST00000528611 TRACP01848 142 aa3.77□□□□□ -1.81
MACF1-228ENST00000528611 SPRR1BP22528 89 aa3.77□□□□□ -1.81
MACF1-228ENST00000528611 SMCR5Q8TEV8 140 aa3.77□□□□□ -1.81
MACF1-228ENST00000528611 Q9BRP9 147 aa3.77□□□□□ -1.81
MACF1-228ENST00000528611 SNHG12Q9BXW3 62 aa3.77□□□□□ -1.81
MACF1-228ENST00000528611 SRRM2Q9UQ35 2752 aaKnown RBP3.76□□□□□ -1.81
MACF1-228ENST00000528611 TRIAP1O43715 76 aa3.76□□□□□ -1.81
MACF1-228ENST00000528611 SCGB1C2P0DMR2 95 aa3.76□□□□□ -1.81
MACF1-228ENST00000528611 HAMPP81172 84 aa3.76□□□□□ -1.81
MACF1-228ENST00000528611 PRLHP81277 87 aa3.76□□□□□ -1.81
MACF1-228ENST00000528611 LINC00483Q53H64 154 aa3.76□□□□□ -1.81
MACF1-228ENST00000528611 HIGD2AQ9BW72 106 aa3.76□□□□□ -1.81
MACF1-228ENST00000528611 KIAA1109Q2LD37 5005 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms