RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PLA2G2DQ9UNK4 145 aa7.66□□□□□ -1.18
TRAF3IP2-211ENST00000528599 CDK2AP2O75956 126 aa7.65□□□□□ -1.18
TRAF3IP2-211ENST00000528599 SMCPP49901 116 aaPredicted RBP7.64□□□□□ -1.19
TRAF3IP2-211ENST00000528599 PRR3P79522 188 aaKnown RBP7.64□□□□□ -1.19
TRAF3IP2-211ENST00000528599 C22orf24Q9Y442 160 aa7.63□□□□□ -1.19
TRAF3IP2-211ENST00000528599 IGLV5-37A0A075B6J1 123 aa7.63□□□□□ -1.19
TRAF3IP2-211ENST00000528599 IGKV2-28A0A075B6P5 120 aa7.63□□□□□ -1.19
TRAF3IP2-211ENST00000528599 IGKV2D-28P01615 120 aa7.63□□□□□ -1.19
TRAF3IP2-211ENST00000528599 NDUFC2O95298 119 aa7.62□□□□□ -1.19
TRAF3IP2-211ENST00000528599 RPL28P46779 137 aaKnown RBP7.62□□□□□ -1.19
TRAF3IP2-211ENST00000528599 ETDBQ3ZM63 59 aa7.62□□□□□ -1.19
TRAF3IP2-211ENST00000528599 PHF5AQ7RTV0 110 aaKnown RBP7.62□□□□□ -1.19
TRAF3IP2-211ENST00000528599 J3QR89 54 aa7.61□□□□□ -1.19
TRAF3IP2-211ENST00000528599 LST1O00453 97 aa7.61□□□□□ -1.19
TRAF3IP2-211ENST00000528599 NCR3O14931 201 aa7.61□□□□□ -1.19
TRAF3IP2-211ENST00000528599 NKAPP1Q8N9T2 125 aa7.61□□□□□ -1.19
TRAF3IP2-211ENST00000528599 KRTAP4-5Q9BYR2 181 aa7.61□□□□□ -1.19
TRAF3IP2-211ENST00000528599 TRBV10-2A0A0K0K1G8 114 aa7.6□□□□□ -1.19
TRAF3IP2-211ENST00000528599 LINC00337Q8N6G1 96 aa7.6□□□□□ -1.19
TRAF3IP2-211ENST00000528599 ABCA13Q86UQ4 5058 aa7.6□□□□□ -1.19
TRAF3IP2-211ENST00000528599 PCLOQ9Y6V0 5065 aa7.6□□□□□ -1.19
TRAF3IP2-211ENST00000528599 SLC25A20O43772 301 aa7.6□□□□□ -1.19
TRAF3IP2-211ENST00000528599 MRPL55Q7Z7F7 128 aaKnown RBP7.6□□□□□ -1.19
TRAF3IP2-211ENST00000528599 TEN1Q86WV5 123 aa7.6□□□□□ -1.19
TRAF3IP2-211ENST00000528599 C7orf33Q8WU49 177 aa7.6□□□□□ -1.19
TRAF3IP2-211ENST00000528599 C9JAW5 83 aa7.59□□□□□ -1.19
TRAF3IP2-211ENST00000528599 KRTAP11-1Q8IUC1 163 aa7.59□□□□□ -1.19
TRAF3IP2-211ENST00000528599 LINC00167Q96N53 147 aa7.59□□□□□ -1.19
TRAF3IP2-211ENST00000528599 M0R378 163 aa7.58□□□□□ -1.2
TRAF3IP2-211ENST00000528599 MTURNQ8N3F0 131 aa7.58□□□□□ -1.2
TRAF3IP2-211ENST00000528599 ANKRD29Q8N6D5 301 aa7.58□□□□□ -1.2
TRAF3IP2-211ENST00000528599 RPL37AP8A6NKH3 93 aa7.57□□□□□ -1.2
TRAF3IP2-211ENST00000528599 H3BT86 120 aa7.57□□□□□ -1.2
TRAF3IP2-211ENST00000528599 TRACP01848 142 aa7.57□□□□□ -1.2
TRAF3IP2-211ENST00000528599 H0YGX0 51 aa7.57□□□□□ -1.2
TRAF3IP2-211ENST00000528599 SMR3BP02814 79 aaPredicted RBP7.57□□□□□ -1.2
TRAF3IP2-211ENST00000528599 PPDPFLQ8WWR9 84 aa7.57□□□□□ -1.2
TRAF3IP2-211ENST00000528599 CBY1Q9Y3M2 126 aa7.57□□□□□ -1.2
TRAF3IP2-211ENST00000528599 SMIM11BQ8TCY0 68 aa7.56□□□□□ -1.2
TRAF3IP2-211ENST00000528599 CLEC2BQ92478 149 aa7.56□□□□□ -1.2
TRAF3IP2-211ENST00000528599 SRRM2Q9UQ35 2752 aaKnown RBP7.55□□□□□ -1.2
TRAF3IP2-211ENST00000528599 IGLV1-50A0A075B6I6 118 aa7.55□□□□□ -1.2
TRAF3IP2-211ENST00000528599 TRBV10-3A0A0K0K1G6 114 aa7.55□□□□□ -1.2
TRAF3IP2-211ENST00000528599 UBE2BP63146 152 aa7.55□□□□□ -1.2
TRAF3IP2-211ENST00000528599 TMEM126AQ9H061 195 aa7.54□□□□□ -1.2
TRAF3IP2-211ENST00000528599 IGLV6-57P01721 117 aa7.54□□□□□ -1.2
TRAF3IP2-211ENST00000528599 S100A7L2Q5SY68 101 aa7.54□□□□□ -1.2
TRAF3IP2-211ENST00000528599 Q8N1X5 172 aa7.54□□□□□ -1.2
TRAF3IP2-211ENST00000528599 OR13C6PQ8NH95 151 aa7.54□□□□□ -1.2
TRAF3IP2-211ENST00000528599 VPS25Q9BRG1 176 aa7.54□□□□□ -1.2
TRAF3IP2-211ENST00000528599 LINC00528Q8N1L1 170 aa7.53□□□□□ -1.2
TRAF3IP2-211ENST00000528599 SVIPQ8NHG7 77 aa7.53□□□□□ -1.2
TRAF3IP2-211ENST00000528599 VPS13BQ7Z7G8 4022 aa7.52□□□□□ -1.21
TRAF3IP2-211ENST00000528599 PSORS1C2Q9UIG4 136 aa7.52□□□□□ -1.21
TRAF3IP2-211ENST00000528599 KCNQ1DNQ9H478 68 aa7.51□□□□□ -1.21
TRAF3IP2-211ENST00000528599 A0A1B0GX51 115 aa7.51□□□□□ -1.21
TRAF3IP2-211ENST00000528599 FAM218AQ96MZ4 157 aa7.5□□□□□ -1.21
TRAF3IP2-211ENST00000528599 PRYO14603 147 aa7.49□□□□□ -1.21
TRAF3IP2-211ENST00000528599 MYCBP2O75592 4640 aa7.49□□□□□ -1.21
TRAF3IP2-211ENST00000528599 TRAV23DV6A0A075B6W5 121 aa7.48□□□□□ -1.21
TRAF3IP2-211ENST00000528599 RPL37AP61513 92 aaKnown RBP7.48□□□□□ -1.21
TRAF3IP2-211ENST00000528599 Q5VSD8 79 aa7.48□□□□□ -1.21
TRAF3IP2-211ENST00000528599 REG3GQ6UW15 175 aa7.48□□□□□ -1.21
TRAF3IP2-211ENST00000528599 BAALC-AS2P0C853 105 aa7.47□□□□□ -1.21
TRAF3IP2-211ENST00000528599 SPRR1AP35321 89 aa7.47□□□□□ -1.21
TRAF3IP2-211ENST00000528599 KRTAP10-4P60372 401 aaPredicted RBP7.47□□□□□ -1.21
TRAF3IP2-211ENST00000528599 C1orf137Q5JT78 98 aa7.47□□□□□ -1.21
TRAF3IP2-211ENST00000528599 KRTAP4-16G5E9R7 235 aaPredicted RBP7.47□□□□□ -1.21
TRAF3IP2-211ENST00000528599 FAM229AH3BQW9 127 aa7.46□□□□□ -1.22
TRAF3IP2-211ENST00000528599 ZNF73O43830 326 aaPredicted RBP7.46□□□□□ -1.22
TRAF3IP2-211ENST00000528599 BCE1O60756 84 aa7.46□□□□□ -1.22
TRAF3IP2-211ENST00000528599 TEX49A0A1B0GTD5 131 aa7.45□□□□□ -1.22
TRAF3IP2-211ENST00000528599 DNAL4O96015 105 aa7.44□□□□□ -1.22
TRAF3IP2-211ENST00000528599 C6orf99Q4VX62 202 aa7.44□□□□□ -1.22
TRAF3IP2-211ENST00000528599 SNCGO76070 127 aa7.44□□□□□ -1.22
TRAF3IP2-211ENST00000528599 IGLV7-43P04211 117 aa7.44□□□□□ -1.22
TRAF3IP2-211ENST00000528599 FAM19A1Q7Z5A9 133 aa7.44□□□□□ -1.22
TRAF3IP2-211ENST00000528599 ETDCA0A1B0GVM5 59 aa7.43□□□□□ -1.22
TRAF3IP2-211ENST00000528599 PLA2G1BP04054 148 aaKnown RBP7.43□□□□□ -1.22
TRAF3IP2-211ENST00000528599 KRTAP13-1Q8IUC0 172 aa7.43□□□□□ -1.22
TRAF3IP2-211ENST00000528599 DIRC1Q969H9 104 aa7.43□□□□□ -1.22
TRAF3IP2-211ENST00000528599 SIGMAR1Q99720 223 aa7.43□□□□□ -1.22
TRAF3IP2-211ENST00000528599 FAM240AA0A1B0GVK7 77 aa7.42□□□□□ -1.22
TRAF3IP2-211ENST00000528599 B5MCH6 92 aa7.42□□□□□ -1.22
TRAF3IP2-211ENST00000528599 PRLHP81277 87 aa7.42□□□□□ -1.22
TRAF3IP2-211ENST00000528599 CDIP1Q9H305 208 aa7.42□□□□□ -1.22
TRAF3IP2-211ENST00000528599 TRBV7-6A0A0J9YX20 115 aa7.41□□□□□ -1.22
TRAF3IP2-211ENST00000528599 UBE2AP49459 152 aa7.41□□□□□ -1.22
TRAF3IP2-211ENST00000528599 LINC00575Q6W349 94 aa7.41□□□□□ -1.22
TRAF3IP2-211ENST00000528599 ZNF861PO60384 105 aa7.4□□□□□ -1.23
TRAF3IP2-211ENST00000528599 Q6ZRX8 168 aa7.4□□□□□ -1.23
TRAF3IP2-211ENST00000528599 OBSCN-AS1Q96MR7 158 aa7.4□□□□□ -1.23
TRAF3IP2-211ENST00000528599 ORMDL1Q9P0S3 153 aa7.4□□□□□ -1.23
TRAF3IP2-211ENST00000528599 FLG2Q5D862 2391 aaPredicted RBP7.4□□□□□ -1.23
TRAF3IP2-211ENST00000528599 LRP1Q07954 4544 aaKnown RBP7.4□□□□□ -1.23
TRAF3IP2-211ENST00000528599 H0Y9J4 135 aa7.39□□□□□ -1.23
TRAF3IP2-211ENST00000528599 ACYP1P07311 99 aa7.39□□□□□ -1.23
TRAF3IP2-211ENST00000528599 INAFM2P0DMQ5 153 aa7.39□□□□□ -1.23
TRAF3IP2-211ENST00000528599 COX7BP24311 80 aa7.39□□□□□ -1.23
TRAF3IP2-211ENST00000528599 ELOF1P60002 83 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms