RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 KRTAP1-3Q8IUG1 177 aa12.2□□□□□ -0.46
LTBP3-210ENST00000528516 PDE6GP18545 87 aa12.19□□□□□ -0.46
LTBP3-210ENST00000528516 BCE1O60756 84 aa12.19□□□□□ -0.46
LTBP3-210ENST00000528516 DEFB116Q30KQ4 102 aa12.19□□□□□ -0.46
LTBP3-210ENST00000528516 MUC7Q8TAX7 377 aa12.18□□□□□ -0.46
LTBP3-210ENST00000528516 LINC00167Q96N53 147 aa12.18□□□□□ -0.46
LTBP3-210ENST00000528516 NBPF19A0A087WUL8 3843 aa12.18□□□□□ -0.46
LTBP3-210ENST00000528516 Q6ZRU5 148 aa12.18□□□□□ -0.46
LTBP3-210ENST00000528516 X6R8D5 127 aa12.17□□□□□ -0.46
LTBP3-210ENST00000528516 CXCL6P80162 114 aa12.17□□□□□ -0.46
LTBP3-210ENST00000528516 F8WDY8 70 aa12.17□□□□□ -0.46
LTBP3-210ENST00000528516 WFDC13Q8IUB5 93 aa12.17□□□□□ -0.46
LTBP3-210ENST00000528516 SPATA3Q8NHX4 192 aa12.16□□□□□ -0.46
LTBP3-210ENST00000528516 STAB2Q8WWQ8 2551 aa12.16□□□□□ -0.46
LTBP3-210ENST00000528516 H0Y9J4 135 aa12.16□□□□□ -0.46
LTBP3-210ENST00000528516 GIG44P09565 113 aaPredicted RBP12.16□□□□□ -0.46
LTBP3-210ENST00000528516 C16orf95Q9H693 158 aa12.15□□□□□ -0.46
LTBP3-210ENST00000528516 A0A1B0GUV1 79 aa12.15□□□□□ -0.47
LTBP3-210ENST00000528516 PRYO14603 147 aa12.15□□□□□ -0.47
LTBP3-210ENST00000528516 FSHBP01225 129 aa12.15□□□□□ -0.47
LTBP3-210ENST00000528516 LOC110117498A0A087WWA1 95 aa12.14□□□□□ -0.47
LTBP3-210ENST00000528516 M0R378 163 aa12.13□□□□□ -0.47
LTBP3-210ENST00000528516 ESRGQ1W209 222 aa12.13□□□□□ -0.47
LTBP3-210ENST00000528516 FAM229BQ4G0N7 80 aa12.12□□□□□ -0.47
LTBP3-210ENST00000528516 COX17Q14061 63 aa12.1□□□□□ -0.47
LTBP3-210ENST00000528516 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.1□□□□□ -0.47
LTBP3-210ENST00000528516 FAM30AQ9NZY2 134 aa12.09□□□□□ -0.47
LTBP3-210ENST00000528516 EPM2AB3EWF7 344 aa12.09□□□□□ -0.47
LTBP3-210ENST00000528516 IL17DQ8TAD2 202 aa12.09□□□□□ -0.47
LTBP3-210ENST00000528516 TRBV7-4A0A0J9YYF1 115 aa12.08□□□□□ -0.47
LTBP3-210ENST00000528516 KMT2BQ9UMN6 2715 aaPredicted RBP12.07□□□□□ -0.48
LTBP3-210ENST00000528516 C6orf48Q9UBA6 75 aa12.06□□□□□ -0.48
LTBP3-210ENST00000528516 Q8NDZ9 215 aa12.06□□□□□ -0.48
LTBP3-210ENST00000528516 PSPHP1O15172 72 aa12.05□□□□□ -0.48
LTBP3-210ENST00000528516 PLAC8L1A1L4L8 177 aa12.04□□□□□ -0.48
LTBP3-210ENST00000528516 EGFEM1PQ0D2K5 195 aa12.04□□□□□ -0.48
LTBP3-210ENST00000528516 CSNK1G2-AS1Q8NCQ2 148 aa12.03□□□□□ -0.48
LTBP3-210ENST00000528516 H3BQ85 93 aa12.02□□□□□ -0.48
LTBP3-210ENST00000528516 ZNF469Q96JG9 3925 aaPredicted RBP12.02□□□□□ -0.48
LTBP3-210ENST00000528516 SPINK6Q6UWN8 80 aa12.02□□□□□ -0.49
LTBP3-210ENST00000528516 PRLHP81277 87 aa12.01□□□□□ -0.49
LTBP3-210ENST00000528516 C19orf73Q9NVV2 129 aa12.01□□□□□ -0.49
LTBP3-210ENST00000528516 KIAA0087Q14695 138 aa12.01□□□□□ -0.49
LTBP3-210ENST00000528516 MP68P56378 58 aa12□□□□□ -0.49
LTBP3-210ENST00000528516 KRTAP10-3P60369 221 aa12□□□□□ -0.49
LTBP3-210ENST00000528516 KRTAP1-1Q07627 177 aa11.99□□□□□ -0.49
LTBP3-210ENST00000528516 C1orf137Q5JT78 98 aa11.99□□□□□ -0.49
LTBP3-210ENST00000528516 IGLV9-49A0A0B4J1Y8 123 aa11.98□□□□□ -0.49
LTBP3-210ENST00000528516 PMAIP1Q13794 54 aa11.98□□□□□ -0.49
LTBP3-210ENST00000528516 PDZD2O15018 2839 aa11.97□□□□□ -0.49
LTBP3-210ENST00000528516 Q8NAQ8 132 aa11.96□□□□□ -0.5
LTBP3-210ENST00000528516 NDUFB1O75438 58 aa11.95□□□□□ -0.5
LTBP3-210ENST00000528516 SMIM29Q86T20 159 aa11.94□□□□□ -0.5
LTBP3-210ENST00000528516 IGLV6-57P01721 117 aa11.93□□□□□ -0.5
LTBP3-210ENST00000528516 IGKV4-1P06312 121 aa11.92□□□□□ -0.5
LTBP3-210ENST00000528516 A0A087WSZ3 146 aa11.92□□□□□ -0.5
LTBP3-210ENST00000528516 C7orf33Q8WU49 177 aa11.92□□□□□ -0.5
LTBP3-210ENST00000528516 A0A0G2JQZ4 141 aa11.92□□□□□ -0.5
LTBP3-210ENST00000528516 A0A1W2PNN7 141 aa11.92□□□□□ -0.5
LTBP3-210ENST00000528516 ERC2-IT1O76042 136 aa11.91□□□□□ -0.5
LTBP3-210ENST00000528516 ST20-AS1Q8NBB2 130 aa11.9□□□□□ -0.5
LTBP3-210ENST00000528516 FAM168BA1KXE4 195 aa11.89□□□□□ -0.51
LTBP3-210ENST00000528516 OCR1Q9BZK8 76 aa11.89□□□□□ -0.51
LTBP3-210ENST00000528516 OTOGQ6ZRI0 2925 aa11.88□□□□□ -0.51
LTBP3-210ENST00000528516 B9D2Q9BPU9 175 aa11.88□□□□□ -0.51
LTBP3-210ENST00000528516 DHRS4-AS1Q9P1J3 65 aa11.88□□□□□ -0.51
LTBP3-210ENST00000528516 Q6ZRP5 223 aa11.87□□□□□ -0.51
LTBP3-210ENST00000528516 KRTAP24-1Q3LI83 254 aa11.86□□□□□ -0.51
LTBP3-210ENST00000528516 FBN1P35555 2871 aaKnown RBP11.86□□□□□ -0.51
LTBP3-210ENST00000528516 C1orf64Q8NEQ6 169 aa11.86□□□□□ -0.51
LTBP3-210ENST00000528516 ELOF1P60002 83 aaKnown RBP11.85□□□□□ -0.51
LTBP3-210ENST00000528516 LINC00208Q96KT6 92 aa11.85□□□□□ -0.51
LTBP3-210ENST00000528516 MRPL55Q7Z7F7 128 aaKnown RBP11.84□□□□□ -0.51
LTBP3-210ENST00000528516 SPTSSBQ8NFR3 76 aa11.84□□□□□ -0.51
LTBP3-210ENST00000528516 CHTF8P0CG12 524 aa11.82□□□□□ -0.52
LTBP3-210ENST00000528516 REG3GQ6UW15 175 aa11.81□□□□□ -0.52
LTBP3-210ENST00000528516 hDV103S1A0JD37 113 aa11.81□□□□□ -0.52
LTBP3-210ENST00000528516 SERTAD4-AS1Q5TG53 156 aa11.79□□□□□ -0.52
LTBP3-210ENST00000528516 A8MUN3 132 aa11.78□□□□□ -0.52
LTBP3-210ENST00000528516 PRR15Q8IV56 129 aa11.77□□□□□ -0.52
LTBP3-210ENST00000528516 TRAV22A0A0B4J277 110 aa11.77□□□□□ -0.53
LTBP3-210ENST00000528516 LY6G6CO95867 125 aa11.77□□□□□ -0.53
LTBP3-210ENST00000528516 Q9BRP9 147 aa11.77□□□□□ -0.53
LTBP3-210ENST00000528516 CHKB-CPT1BH3BT56 60 aa11.76□□□□□ -0.53
LTBP3-210ENST00000528516 VPREB1P12018 145 aa11.75□□□□□ -0.53
LTBP3-210ENST00000528516 PCOTHQ58A44 107 aa11.75□□□□□ -0.53
LTBP3-210ENST00000528516 KRTAP10-11P60412 298 aa11.75□□□□□ -0.53
LTBP3-210ENST00000528516 CASC10Q5T4H9 136 aa11.75□□□□□ -0.53
LTBP3-210ENST00000528516 LINC00588Q9Y4M8 146 aa11.75□□□□□ -0.53
LTBP3-210ENST00000528516 LINC01556Q5JQF7 62 aa11.74□□□□□ -0.53
LTBP3-210ENST00000528516 VWFP04275 2813 aa11.74□□□□□ -0.53
LTBP3-210ENST00000528516 C14orf177Q52M58 125 aa11.73□□□□□ -0.53
LTBP3-210ENST00000528516 LINC00612Q8N6U2 182 aa11.73□□□□□ -0.53
LTBP3-210ENST00000528516 LINC00528Q8N1L1 170 aa11.72□□□□□ -0.53
LTBP3-210ENST00000528516 RETNLBQ9BQ08 111 aa11.72□□□□□ -0.53
LTBP3-210ENST00000528516 RPL37AP61513 92 aaKnown RBP11.72□□□□□ -0.53
LTBP3-210ENST00000528516 TENM1Q9UKZ4 2725 aa11.7□□□□□ -0.54
LTBP3-210ENST00000528516 PHF5AQ7RTV0 110 aaKnown RBP11.7□□□□□ -0.54
LTBP3-210ENST00000528516 Q1T7F1 81 aa11.69□□□□□ -0.54
LTBP3-210ENST00000528516 IGHV6-1A0A0B4J1U7 121 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms