RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	S100A7L2	Q5SY68	101 aa		6.81	□□□□□ -1.32
PSMC3-205	ENST00000528362	LINC00308	Q8TCZ7	52 aa		6.81	□□□□□ -1.32
PSMC3-205	ENST00000528362		Q9BRP9	147 aa		6.81	□□□□□ -1.32
PSMC3-205	ENST00000528362	TRAV23DV6	A0A075B6W5	121 aa		6.8	□□□□□ -1.32
PSMC3-205	ENST00000528362		Q6ZRX8	168 aa		6.8	□□□□□ -1.32
PSMC3-205	ENST00000528362	PPDPF	Q9H3Y8	114 aa		6.8	□□□□□ -1.32
PSMC3-205	ENST00000528362	C20orf202	A1L168	122 aa		6.79	□□□□□ -1.32
PSMC3-205	ENST00000528362	LINC00483	Q53H64	154 aa		6.79	□□□□□ -1.32
PSMC3-205	ENST00000528362	SPANXC	Q9NY87	97 aa		6.79	□□□□□ -1.32
PSMC3-205	ENST00000528362	ZNF73	O43830	326 aa	Predicted RBP	6.78	□□□□□ -1.32
PSMC3-205	ENST00000528362	ANKRD39	Q53RE8	183 aa		6.78	□□□□□ -1.32
PSMC3-205	ENST00000528362	ATOH7	Q8N100	152 aa		6.78	□□□□□ -1.32
PSMC3-205	ENST00000528362	RETNLB	Q9BQ08	111 aa		6.78	□□□□□ -1.32
PSMC3-205	ENST00000528362	S100A2	P29034	98 aa		6.77	□□□□□ -1.33
PSMC3-205	ENST00000528362	CTAG1A	P78358	180 aa		6.77	□□□□□ -1.33
PSMC3-205	ENST00000528362	GAGE2A	Q6NT46	116 aa		6.77	□□□□□ -1.33
PSMC3-205	ENST00000528362	KRTAP3-3	Q9BYR6	98 aa		6.76	□□□□□ -1.33
PSMC3-205	ENST00000528362	KRTAP3-2	Q9BYR7	98 aa		6.76	□□□□□ -1.33
PSMC3-205	ENST00000528362	SPAG11A	Q6PDA7	123 aa		6.75	□□□□□ -1.33
PSMC3-205	ENST00000528362	HIST3H2BB	Q8N257	126 aa		6.75	□□□□□ -1.33
PSMC3-205	ENST00000528362		Q8NBF4	154 aa		6.75	□□□□□ -1.33
PSMC3-205	ENST00000528362	SPANXD	Q9BXN6	97 aa		6.75	□□□□□ -1.33
PSMC3-205	ENST00000528362	JOSD1	Q15040	202 aa	Predicted RBP	6.74	□□□□□ -1.33
PSMC3-205	ENST00000528362	SCGB1D4	Q6XE38	83 aa		6.74	□□□□□ -1.33
PSMC3-205	ENST00000528362	PCP2	Q8IVA1	136 aa		6.74	□□□□□ -1.33
PSMC3-205	ENST00000528362	OR13C6P	Q8NH95	151 aa		6.74	□□□□□ -1.33
PSMC3-205	ENST00000528362	HIST1H2BL	Q99880	126 aa		6.74	□□□□□ -1.33
PSMC3-205	ENST00000528362	TMA7	Q9Y2S6	64 aa	Known RBP	6.74	□□□□□ -1.33
PSMC3-205	ENST00000528362	CBY1	Q9Y3M2	126 aa		6.73	□□□□□ -1.33
PSMC3-205	ENST00000528362	IGLV9-49	A0A0B4J1Y8	123 aa		6.72	□□□□□ -1.33
PSMC3-205	ENST00000528362	AKR1D1	P51857	326 aa		6.72	□□□□□ -1.33
PSMC3-205	ENST00000528362	SNRPE	P62304	92 aa	Known RBP	6.72	□□□□□ -1.33
PSMC3-205	ENST00000528362	MOBP	Q13875	183 aa		6.72	□□□□□ -1.33
PSMC3-205	ENST00000528362	ST20-AS1	Q8NBB2	130 aa		6.72	□□□□□ -1.33
PSMC3-205	ENST00000528362	MUC2	Q02817	5179 aa		6.71	□□□□□ -1.33
PSMC3-205	ENST00000528362	IGLV7-46	A0A075B6I9	117 aa		6.71	□□□□□ -1.34
PSMC3-205	ENST00000528362	HINT1	P49773	126 aa	Predicted RBP	6.71	□□□□□ -1.34
PSMC3-205	ENST00000528362	C4orf48	Q5BLP8	95 aa		6.71	□□□□□ -1.34
PSMC3-205	ENST00000528362	LINC00518	Q8N0U6	118 aa		6.71	□□□□□ -1.34
PSMC3-205	ENST00000528362	IFITM1	P13164	125 aa		6.7	□□□□□ -1.34
PSMC3-205	ENST00000528362	SPINK1	P00995	79 aa		6.69	□□□□□ -1.34
PSMC3-205	ENST00000528362	ELOF1	P60002	83 aa	Known RBP	6.69	□□□□□ -1.34
PSMC3-205	ENST00000528362	TPRXL	Q17RH7	258 aa		6.69	□□□□□ -1.34
PSMC3-205	ENST00000528362	C6orf99	Q4VX62	202 aa		6.69	□□□□□ -1.34
PSMC3-205	ENST00000528362		Q6ZVH6	145 aa		6.69	□□□□□ -1.34
PSMC3-205	ENST00000528362	COPS9	Q8WXC6	57 aa		6.69	□□□□□ -1.34
PSMC3-205	ENST00000528362	C5orf52	A6NGY3	159 aa		6.68	□□□□□ -1.34
PSMC3-205	ENST00000528362	SSBP3-AS1	Q7Z2R9	100 aa		6.68	□□□□□ -1.34
PSMC3-205	ENST00000528362	MUSTN1	Q8IVN3	82 aa		6.68	□□□□□ -1.34
PSMC3-205	ENST00000528362	DHRS4-AS1	Q9P1J3	65 aa		6.68	□□□□□ -1.34
PSMC3-205	ENST00000528362	COX7B	P24311	80 aa		6.67	□□□□□ -1.34
PSMC3-205	ENST00000528362	SPRR1B	P22528	89 aa		6.66	□□□□□ -1.34
PSMC3-205	ENST00000528362	C9orf153	Q5TBE3	101 aa		6.66	□□□□□ -1.34
PSMC3-205	ENST00000528362	FP248	Q71RG6	208 aa	Predicted RBP	6.66	□□□□□ -1.34
PSMC3-205	ENST00000528362		A6NDN8	102 aa		6.65	□□□□□ -1.34
PSMC3-205	ENST00000528362	HSBP1L1	C9JCN9	74 aa		6.65	□□□□□ -1.34
PSMC3-205	ENST00000528362	RPS29	P62273	56 aa	Known RBP	6.65	□□□□□ -1.34
PSMC3-205	ENST00000528362	TRBV7-6	A0A0J9YX20	115 aa		6.64	□□□□□ -1.35
PSMC3-205	ENST00000528362	CDIP1	Q9H305	208 aa		6.64	□□□□□ -1.35
PSMC3-205	ENST00000528362		Q8N377	158 aa		6.63	□□□□□ -1.35
PSMC3-205	ENST00000528362	TRAV13-2	A0A0B4J235	113 aa		6.62	□□□□□ -1.35
PSMC3-205	ENST00000528362		A0A1B0GWB2	263 aa		6.62	□□□□□ -1.35
PSMC3-205	ENST00000528362	SCGB1D1	O95968	90 aa		6.62	□□□□□ -1.35
PSMC3-205	ENST00000528362	KRTAP13-3	Q3SY46	172 aa		6.61	□□□□□ -1.35
PSMC3-205	ENST00000528362	SLC25A34	Q6PIV7	304 aa		6.61	□□□□□ -1.35
PSMC3-205	ENST00000528362	SMIM11B	Q8TCY0	68 aa		6.61	□□□□□ -1.35
PSMC3-205	ENST00000528362	DEFB105A	Q8NG35	78 aa		6.6	□□□□□ -1.35
PSMC3-205	ENST00000528362	LAMTOR3	Q9UHA4	124 aa		6.6	□□□□□ -1.35
PSMC3-205	ENST00000528362	MUC17	Q685J3	4493 aa		6.6	□□□□□ -1.35
PSMC3-205	ENST00000528362		A4D1N5	150 aa		6.59	□□□□□ -1.35
PSMC3-205	ENST00000528362	SLC25A20	O43772	301 aa		6.59	□□□□□ -1.35
PSMC3-205	ENST00000528362	LINC01547	P58512	204 aa	Predicted RBP	6.59	□□□□□ -1.35
PSMC3-205	ENST00000528362	TAL2	Q16559	108 aa		6.59	□□□□□ -1.35
PSMC3-205	ENST00000528362		Q1RN00	199 aa		6.59	□□□□□ -1.35
PSMC3-205	ENST00000528362	IGLV5-48	A0A075B6I7	105 aa		6.58	□□□□□ -1.36
PSMC3-205	ENST00000528362	TEX49	A0A1B0GTD5	131 aa		6.58	□□□□□ -1.36
PSMC3-205	ENST00000528362	COX8A	P10176	69 aa		6.57	□□□□□ -1.36
PSMC3-205	ENST00000528362	SMIM29	Q86T20	159 aa		6.57	□□□□□ -1.36
PSMC3-205	ENST00000528362	FAT4	Q6V0I7	4981 aa		6.56	□□□□□ -1.36
PSMC3-205	ENST00000528362	HRCT1	Q6UXD1	115 aa		6.56	□□□□□ -1.36
PSMC3-205	ENST00000528362	C12orf57	Q99622	126 aa		6.55	□□□□□ -1.36
PSMC3-205	ENST00000528362	NHP2	Q9NX24	153 aa	Known RBP	6.55	□□□□□ -1.36
PSMC3-205	ENST00000528362	DLEU1	O43261	78 aa		6.54	□□□□□ -1.36
PSMC3-205	ENST00000528362	HIST1H4G	Q99525	98 aa		6.54	□□□□□ -1.36
PSMC3-205	ENST00000528362	KRTAP9-2	Q9BYQ4	174 aa		6.54	□□□□□ -1.36
PSMC3-205	ENST00000528362	LINC00575	Q6W349	94 aa		6.53	□□□□□ -1.36
PSMC3-205	ENST00000528362	LIMD2	Q9BT23	127 aa		6.53	□□□□□ -1.36
PSMC3-205	ENST00000528362	VAMP8	Q9BV40	100 aa		6.53	□□□□□ -1.36
PSMC3-205	ENST00000528362	PRO1933	Q9H354	126 aa		6.53	□□□□□ -1.36
PSMC3-205	ENST00000528362		A0A0U1RQV1	116 aa		6.52	□□□□□ -1.37
PSMC3-205	ENST00000528362	CD164	Q04900	197 aa		6.52	□□□□□ -1.37
PSMC3-205	ENST00000528362	VAMP3	Q15836	100 aa		6.52	□□□□□ -1.37
PSMC3-205	ENST00000528362	C14orf144	Q96I85	54 aa		6.52	□□□□□ -1.37
PSMC3-205	ENST00000528362	PAM16	Q9Y3D7	125 aa		6.52	□□□□□ -1.37
PSMC3-205	ENST00000528362		A0A0G2JQZ4	141 aa		6.51	□□□□□ -1.37
PSMC3-205	ENST00000528362	SPATA45	Q537H7	98 aa		6.51	□□□□□ -1.37
PSMC3-205	ENST00000528362	hADV29S1	A0JD25	119 aa		6.5	□□□□□ -1.37
PSMC3-205	ENST00000528362		H7C2G1	150 aa		6.5	□□□□□ -1.37
PSMC3-205	ENST00000528362	ASB16-AS1	Q495Z4	193 aa		6.5	□□□□□ -1.37
PSMC3-205	ENST00000528362	PYY3	Q5JQD4	70 aa		6.49	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms