RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 Q6ZRP5 223 aa9.61□□□□□ -0.87
CAPN1-214ENST00000528165 HIVEP2P31629 2446 aa9.61□□□□□ -0.87
CAPN1-214ENST00000528165 KRTAP1-1Q07627 177 aa9.61□□□□□ -0.87
CAPN1-214ENST00000528165 C15orf56Q8N910 161 aa9.6□□□□□ -0.87
CAPN1-214ENST00000528165 NKAPP1Q8N9T2 125 aa9.6□□□□□ -0.87
CAPN1-214ENST00000528165 UBR5O95071 2799 aaPredicted RBP9.6□□□□□ -0.87
CAPN1-214ENST00000528165 WFDC10BQ8IUB3 73 aa9.6□□□□□ -0.87
CAPN1-214ENST00000528165 KCNQ1DNQ9H478 68 aa9.6□□□□□ -0.87
CAPN1-214ENST00000528165 A0A1B0GW54 56 aa9.6□□□□□ -0.87
CAPN1-214ENST00000528165 hDV103S1A0JD37 113 aa9.6□□□□□ -0.87
CAPN1-214ENST00000528165 KRTAP26-1Q6PEX3 210 aa9.59□□□□□ -0.87
CAPN1-214ENST00000528165 F8WDY8 70 aa9.58□□□□□ -0.88
CAPN1-214ENST00000528165 LCE6AA0A183 80 aa9.58□□□□□ -0.88
CAPN1-214ENST00000528165 A0A1W2PNM2 257 aa9.57□□□□□ -0.88
CAPN1-214ENST00000528165 V9GYY9 64 aa9.57□□□□□ -0.88
CAPN1-214ENST00000528165 LRCOL1A6NCL2 159 aa9.56□□□□□ -0.88
CAPN1-214ENST00000528165 C1orf137Q5JT78 98 aa9.56□□□□□ -0.88
CAPN1-214ENST00000528165 C7orf33Q8WU49 177 aa9.56□□□□□ -0.88
CAPN1-214ENST00000528165 DHRS4-AS1Q9P1J3 65 aa9.56□□□□□ -0.88
CAPN1-214ENST00000528165 USP24Q9UPU5 2620 aa9.56□□□□□ -0.88
CAPN1-214ENST00000528165 C1orf64Q8NEQ6 169 aa9.55□□□□□ -0.88
CAPN1-214ENST00000528165 ETDCA0A1B0GVM5 59 aa9.55□□□□□ -0.88
CAPN1-214ENST00000528165 SERTAD4-AS1Q5TG53 156 aa9.55□□□□□ -0.88
CAPN1-214ENST00000528165 SYCNQ0VAF6 134 aa9.54□□□□□ -0.88
CAPN1-214ENST00000528165 Q8NBF4 154 aa9.54□□□□□ -0.88
CAPN1-214ENST00000528165 Q6ZRX8 168 aa9.53□□□□□ -0.88
CAPN1-214ENST00000528165 Q1T7F1 81 aa9.52□□□□□ -0.88
CAPN1-214ENST00000528165 ZCCHC13Q8WW36 166 aaKnown RBP9.52□□□□□ -0.88
CAPN1-214ENST00000528165 DSCR10P59022 87 aa9.51□□□□□ -0.89
CAPN1-214ENST00000528165 IGKV2D-24A0A075B6R9 120 aa9.51□□□□□ -0.89
CAPN1-214ENST00000528165 TNP2Q05952 138 aa9.51□□□□□ -0.89
CAPN1-214ENST00000528165 K7EQZ3 153 aa9.5□□□□□ -0.89
CAPN1-214ENST00000528165 Q9BRP9 147 aa9.5□□□□□ -0.89
CAPN1-214ENST00000528165 RPL37AP8A6NKH3 93 aa9.5□□□□□ -0.89
CAPN1-214ENST00000528165 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.5□□□□□ -0.89
CAPN1-214ENST00000528165 VWFP04275 2813 aa9.49□□□□□ -0.89
CAPN1-214ENST00000528165 ST20-AS1Q8NBB2 130 aa9.49□□□□□ -0.89
CAPN1-214ENST00000528165 SPRR4Q96PI1 79 aa9.49□□□□□ -0.89
CAPN1-214ENST00000528165 PRR15Q8IV56 129 aa9.49□□□□□ -0.89
CAPN1-214ENST00000528165 ANK3Q12955 4377 aaKnown RBP9.48□□□□□ -0.89
CAPN1-214ENST00000528165 H3BNG1 76 aa9.47□□□□□ -0.89
CAPN1-214ENST00000528165 HCG22E2RYF7 251 aa9.46□□□□□ -0.89
CAPN1-214ENST00000528165 PRR4Q16378 134 aa9.46□□□□□ -0.89
CAPN1-214ENST00000528165 KRTAP4-16G5E9R7 235 aaPredicted RBP9.46□□□□□ -0.9
CAPN1-214ENST00000528165 PSPHP1O15172 72 aa9.46□□□□□ -0.9
CAPN1-214ENST00000528165 SEC61GP60059 68 aa9.46□□□□□ -0.9
CAPN1-214ENST00000528165 CYP4F30PQ9H0H9 118 aa9.45□□□□□ -0.9
CAPN1-214ENST00000528165 IGLV1-50A0A075B6I6 118 aa9.45□□□□□ -0.9
CAPN1-214ENST00000528165 UNC79Q9P2D8 2635 aa9.44□□□□□ -0.9
CAPN1-214ENST00000528165 PLA2G2DQ9UNK4 145 aa9.44□□□□□ -0.9
CAPN1-214ENST00000528165 TRAV22A0A0B4J277 110 aa9.43□□□□□ -0.9
CAPN1-214ENST00000528165 SPRR1AP35321 89 aa9.43□□□□□ -0.9
CAPN1-214ENST00000528165 FAM168BA1KXE4 195 aa9.43□□□□□ -0.9
CAPN1-214ENST00000528165 NDUFB1O75438 58 aa9.43□□□□□ -0.9
CAPN1-214ENST00000528165 LINC01556Q5JQF7 62 aa9.42□□□□□ -0.9
CAPN1-214ENST00000528165 PSCAO43653 123 aa9.41□□□□□ -0.9
CAPN1-214ENST00000528165 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
CAPN1-214ENST00000528165 UBE2BP63146 152 aa9.41□□□□□ -0.9
CAPN1-214ENST00000528165 HIVEP1P15822 2718 aa9.41□□□□□ -0.9
CAPN1-214ENST00000528165 SMR3AQ99954 134 aa9.41□□□□□ -0.9
CAPN1-214ENST00000528165 IGLV5-37A0A075B6J1 123 aa9.4□□□□□ -0.91
CAPN1-214ENST00000528165 MP68P56378 58 aa9.4□□□□□ -0.91
CAPN1-214ENST00000528165 PMAIP1Q13794 54 aa9.4□□□□□ -0.91
CAPN1-214ENST00000528165 PRB2P02812 416 aaPredicted RBP9.39□□□□□ -0.91
CAPN1-214ENST00000528165 LINC00476Q8WZB0 136 aa9.39□□□□□ -0.91
CAPN1-214ENST00000528165 WFDC13Q8IUB5 93 aa9.38□□□□□ -0.91
CAPN1-214ENST00000528165 RETNQ9HD89 108 aa9.38□□□□□ -0.91
CAPN1-214ENST00000528165 DEFB116Q30KQ4 102 aa9.37□□□□□ -0.91
CAPN1-214ENST00000528165 PDZD2O15018 2839 aa9.37□□□□□ -0.91
CAPN1-214ENST00000528165 MRPL55Q7Z7F7 128 aaKnown RBP9.37□□□□□ -0.91
CAPN1-214ENST00000528165 A0A0G2JQZ4 141 aa9.35□□□□□ -0.91
CAPN1-214ENST00000528165 A0A1W2PNN7 141 aa9.35□□□□□ -0.91
CAPN1-214ENST00000528165 A8MUN3 132 aa9.35□□□□□ -0.91
CAPN1-214ENST00000528165 KRTAP7-1Q8IUC3 87 aa9.35□□□□□ -0.91
CAPN1-214ENST00000528165 LINC00208Q96KT6 92 aa9.34□□□□□ -0.91
CAPN1-214ENST00000528165 B9D2Q9BPU9 175 aa9.34□□□□□ -0.91
CAPN1-214ENST00000528165 NOTCH2Q04721 2471 aa9.34□□□□□ -0.91
CAPN1-214ENST00000528165 IGFL1Q6UW32 110 aa9.33□□□□□ -0.92
CAPN1-214ENST00000528165 REG3GQ6UW15 175 aa9.32□□□□□ -0.92
CAPN1-214ENST00000528165 A0A087WSZ3 146 aa9.32□□□□□ -0.92
CAPN1-214ENST00000528165 ITPR2Q14571 2701 aa9.31□□□□□ -0.92
CAPN1-214ENST00000528165 DEFB131BA0A096LNP1 70 aa9.31□□□□□ -0.92
CAPN1-214ENST00000528165 DNAH10OSP0CZ25 163 aa9.3□□□□□ -0.92
CAPN1-214ENST00000528165 TENM1Q9UKZ4 2725 aa9.29□□□□□ -0.92
CAPN1-214ENST00000528165 CASC10Q5T4H9 136 aa9.28□□□□□ -0.92
CAPN1-214ENST00000528165 PKD1L1Q8TDX9 2849 aa9.28□□□□□ -0.92
CAPN1-214ENST00000528165 H0Y9P7 68 aa9.28□□□□□ -0.92
CAPN1-214ENST00000528165 RPL37AP61513 92 aaKnown RBP9.28□□□□□ -0.92
CAPN1-214ENST00000528165 Q5VV11 94 aa9.28□□□□□ -0.92
CAPN1-214ENST00000528165 SPANXA2-OT1Q8N9U9 137 aa9.28□□□□□ -0.92
CAPN1-214ENST00000528165 TENM4Q6N022 2769 aa9.27□□□□□ -0.93
CAPN1-214ENST00000528165 F8P00451 2351 aa9.26□□□□□ -0.93
CAPN1-214ENST00000528165 KRTAP29-1A8MX34 341 aaPredicted RBP9.26□□□□□ -0.93
CAPN1-214ENST00000528165 H3BPC8 53 aa9.26□□□□□ -0.93
CAPN1-214ENST00000528165 CASC2Q6XLA1 102 aa9.26□□□□□ -0.93
CAPN1-214ENST00000528165 C11orf45Q8TAV5 145 aa9.25□□□□□ -0.93
CAPN1-214ENST00000528165 LIMD2Q9BT23 127 aa9.25□□□□□ -0.93
CAPN1-214ENST00000528165 ATRQ13535 2644 aa9.24□□□□□ -0.93
CAPN1-214ENST00000528165 IGLV8-61A0A075B6I0 122 aa9.24□□□□□ -0.93
CAPN1-214ENST00000528165 CHKB-CPT1BH3BT56 60 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms