RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 LINC00308Q8TCZ7 52 aa19.1■□□□□ 0.65
SSSCA1-205ENST00000527920 SPANXCQ9NY87 97 aa19.09■□□□□ 0.65
SSSCA1-205ENST00000527920 CBY1Q9Y3M2 126 aa19.09■□□□□ 0.65
SSSCA1-205ENST00000527920 C20orf202A1L168 122 aa19.08■□□□□ 0.64
SSSCA1-205ENST00000527920 Q9BRP9 147 aa19.07■□□□□ 0.64
SSSCA1-205ENST00000527920 JOSD1Q15040 202 aaPredicted RBP19.05■□□□□ 0.64
SSSCA1-205ENST00000527920 ZNF73O43830 326 aaPredicted RBP19.04■□□□□ 0.64
SSSCA1-205ENST00000527920 ERC2-IT1O76042 136 aa19.04■□□□□ 0.64
SSSCA1-205ENST00000527920 TTTY13Q9BZ97 58 aa19.03■□□□□ 0.64
SSSCA1-205ENST00000527920 PPDPFQ9H3Y8 114 aa19.03■□□□□ 0.64
SSSCA1-205ENST00000527920 AKR1D1P51857 326 aa19.02■□□□□ 0.64
SSSCA1-205ENST00000527920 GAGE2AQ6NT46 116 aa19■□□□□ 0.63
SSSCA1-205ENST00000527920 RETNLBQ9BQ08 111 aa19■□□□□ 0.63
SSSCA1-205ENST00000527920 C4orf48Q5BLP8 95 aa18.97■□□□□ 0.63
SSSCA1-205ENST00000527920 Q8NBF4 154 aa18.97■□□□□ 0.63
SSSCA1-205ENST00000527920 SPANXDQ9BXN6 97 aa18.97■□□□□ 0.63
SSSCA1-205ENST00000527920 HINT1P49773 126 aaPredicted RBP18.95■□□□□ 0.62
SSSCA1-205ENST00000527920 ANKRD39Q53RE8 183 aa18.94■□□□□ 0.62
SSSCA1-205ENST00000527920 C5orf52A6NGY3 159 aa18.93■□□□□ 0.62
SSSCA1-205ENST00000527920 SCGB1D4Q6XE38 83 aa18.93■□□□□ 0.62
SSSCA1-205ENST00000527920 LINC00518Q8N0U6 118 aa18.93■□□□□ 0.62
SSSCA1-205ENST00000527920 S100A1P23297 94 aa18.92■□□□□ 0.62
SSSCA1-205ENST00000527920 OR13C6PQ8NH95 151 aa18.92■□□□□ 0.62
SSSCA1-205ENST00000527920 TPRXLQ17RH7 258 aa18.91■□□□□ 0.62
SSSCA1-205ENST00000527920 COPS9Q8WXC6 57 aa18.9■□□□□ 0.62
SSSCA1-205ENST00000527920 IGLV7-46A0A075B6I9 117 aa18.89■□□□□ 0.61
SSSCA1-205ENST00000527920 SPINK1P00995 79 aa18.89■□□□□ 0.61
SSSCA1-205ENST00000527920 SSBP3-AS1Q7Z2R9 100 aa18.89■□□□□ 0.61
SSSCA1-205ENST00000527920 ATOH7Q8N100 152 aa18.89■□□□□ 0.61
SSSCA1-205ENST00000527920 SNRPEP62304 92 aaKnown RBP18.87■□□□□ 0.61
SSSCA1-205ENST00000527920 MOBPQ13875 183 aa18.87■□□□□ 0.61
SSSCA1-205ENST00000527920 Q6ZVH6 145 aa18.87■□□□□ 0.61
SSSCA1-205ENST00000527920 IFITM1P13164 125 aa18.86■□□□□ 0.61
SSSCA1-205ENST00000527920 IGLV9-49A0A0B4J1Y8 123 aa18.85■□□□□ 0.61
SSSCA1-205ENST00000527920 FP248Q71RG6 208 aaPredicted RBP18.84■□□□□ 0.61
SSSCA1-205ENST00000527920 HIST3H2BBQ8N257 126 aa18.84■□□□□ 0.61
SSSCA1-205ENST00000527920 DHRS4-AS1Q9P1J3 65 aa18.83■□□□□ 0.6
SSSCA1-205ENST00000527920 RPS29P62273 56 aaKnown RBP18.82■□□□□ 0.6
SSSCA1-205ENST00000527920 HIST1H2BLQ99880 126 aa18.82■□□□□ 0.6
SSSCA1-205ENST00000527920 PCP2Q8IVA1 136 aa18.81■□□□□ 0.6
SSSCA1-205ENST00000527920 S100A2P29034 98 aa18.79■□□□□ 0.6
SSSCA1-205ENST00000527920 ST20-AS1Q8NBB2 130 aa18.79■□□□□ 0.6
SSSCA1-205ENST00000527920 ELOF1P60002 83 aaKnown RBP18.78■□□□□ 0.6
SSSCA1-205ENST00000527920 SPRR1BP22528 89 aa18.76■□□□□ 0.59
SSSCA1-205ENST00000527920 C6orf99Q4VX62 202 aa18.76■□□□□ 0.59
SSSCA1-205ENST00000527920 CDIP1Q9H305 208 aa18.76■□□□□ 0.59
SSSCA1-205ENST00000527920 COX7BP24311 80 aa18.75■□□□□ 0.59
SSSCA1-205ENST00000527920 MUC2Q02817 5179 aa18.73■□□□□ 0.59
SSSCA1-205ENST00000527920 TRBV7-6A0A0J9YX20 115 aa18.73■□□□□ 0.59
SSSCA1-205ENST00000527920 C9orf153Q5TBE3 101 aa18.71■□□□□ 0.59
SSSCA1-205ENST00000527920 SLC25A34Q6PIV7 304 aa18.71■□□□□ 0.59
SSSCA1-205ENST00000527920 MUSTN1Q8IVN3 82 aa18.71■□□□□ 0.59
SSSCA1-205ENST00000527920 S100A6P06703 90 aa18.69■□□□□ 0.58
SSSCA1-205ENST00000527920 Q8N377 158 aa18.67■□□□□ 0.58
SSSCA1-205ENST00000527920 A6NDN8 102 aa18.66■□□□□ 0.58
SSSCA1-205ENST00000527920 HSBP1L1C9JCN9 74 aa18.66■□□□□ 0.58
SSSCA1-205ENST00000527920 A0A1B0GWB2 263 aa18.65■□□□□ 0.58
SSSCA1-205ENST00000527920 SLC25A20O43772 301 aa18.63■□□□□ 0.57
SSSCA1-205ENST00000527920 TRAV13-2A0A0B4J235 113 aa18.62■□□□□ 0.57
SSSCA1-205ENST00000527920 KRTAP13-3Q3SY46 172 aa18.61■□□□□ 0.57
SSSCA1-205ENST00000527920 LAMTOR3Q9UHA4 124 aa18.61■□□□□ 0.57
SSSCA1-205ENST00000527920 A0A0U1RQV1 116 aa18.57■□□□□ 0.56
SSSCA1-205ENST00000527920 A4D1N5 150 aa18.57■□□□□ 0.56
SSSCA1-205ENST00000527920 TEX49A0A1B0GTD5 131 aa18.55■□□□□ 0.56
SSSCA1-205ENST00000527920 TAL2Q16559 108 aa18.55■□□□□ 0.56
SSSCA1-205ENST00000527920 SMIM11BQ8TCY0 68 aa18.52■□□□□ 0.56
SSSCA1-205ENST00000527920 MUC17Q685J3 4493 aa18.51■□□□□ 0.55
SSSCA1-205ENST00000527920 IGLV5-48A0A075B6I7 105 aa18.49■□□□□ 0.55
SSSCA1-205ENST00000527920 DEFB105AQ8NG35 78 aa18.49■□□□□ 0.55
SSSCA1-205ENST00000527920 NHP2Q9NX24 153 aaKnown RBP18.49■□□□□ 0.55
SSSCA1-205ENST00000527920 SCGB1D1O95968 90 aa18.47■□□□□ 0.55
SSSCA1-205ENST00000527920 LINC01547P58512 204 aaPredicted RBP18.46■□□□□ 0.55
SSSCA1-205ENST00000527920 Q1RN00 199 aa18.46■□□□□ 0.55
SSSCA1-205ENST00000527920 LIMD2Q9BT23 127 aa18.46■□□□□ 0.55
SSSCA1-205ENST00000527920 CD164Q04900 197 aa18.43■□□□□ 0.54
SSSCA1-205ENST00000527920 SMIM29Q86T20 159 aa18.43■□□□□ 0.54
SSSCA1-205ENST00000527920 PRO1933Q9H354 126 aa18.42■□□□□ 0.54
SSSCA1-205ENST00000527920 VAMP3Q15836 100 aa18.4■□□□□ 0.54
SSSCA1-205ENST00000527920 COX8AP10176 69 aa18.39■□□□□ 0.53
SSSCA1-205ENST00000527920 ASB16-AS1Q495Z4 193 aa18.37■□□□□ 0.53
SSSCA1-205ENST00000527920 DLEU1O43261 78 aa18.36■□□□□ 0.53
SSSCA1-205ENST00000527920 HRCT1Q6UXD1 115 aa18.36■□□□□ 0.53
SSSCA1-205ENST00000527920 LINC00575Q6W349 94 aa18.33■□□□□ 0.52
SSSCA1-205ENST00000527920 HIST1H4GQ99525 98 aa18.33■□□□□ 0.52
SSSCA1-205ENST00000527920 H7C2G1 150 aa18.31■□□□□ 0.52
SSSCA1-205ENST00000527920 Q5XG85 94 aa18.3■□□□□ 0.52
SSSCA1-205ENST00000527920 SEC61BP60468 96 aaKnown RBP18.28■□□□□ 0.52
SSSCA1-205ENST00000527920 XP32Q5T750 250 aa18.27■□□□□ 0.52
SSSCA1-205ENST00000527920 FAT4Q6V0I7 4981 aa18.26■□□□□ 0.51
SSSCA1-205ENST00000527920 hADV29S1A0JD25 119 aa18.24■□□□□ 0.51
SSSCA1-205ENST00000527920 C12orf57Q99622 126 aa18.22■□□□□ 0.51
SSSCA1-205ENST00000527920 HIGD1BQ9P298 99 aa18.22■□□□□ 0.51
SSSCA1-205ENST00000527920 BVES-AS1Q5T3Y7 98 aa18.21■□□□□ 0.51
SSSCA1-205ENST00000527920 Q6ZQY7 126 aa18.21■□□□□ 0.51
SSSCA1-205ENST00000527920 C14orf144Q96I85 54 aa18.2■□□□□ 0.5
SSSCA1-205ENST00000527920 F8WEM9 126 aa18.19■□□□□ 0.5
SSSCA1-205ENST00000527920 SPATA45Q537H7 98 aa18.19■□□□□ 0.5
SSSCA1-205ENST00000527920 PAM16Q9Y3D7 125 aa18.19■□□□□ 0.5
SSSCA1-205ENST00000527920 LCE2AQ5TA79 106 aaPredicted RBP18.17■□□□□ 0.5
SSSCA1-205ENST00000527920 VAMP8Q9BV40 100 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms