RNA–Protein interactions for RNA: ENST00000527840.1

SOX6-209, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-209ENST00000527840 COX8AP10176 69 aa2□□□□□ -2.09
SOX6-209ENST00000527840 SRSF9Q13242 221 aaKnown RBP eCLIP2□□□□□ -2.09
SOX6-209ENST00000527840 BATFQ16520 125 aa2□□□□□ -2.09
SOX6-209ENST00000527840 ORMDL2Q53FV1 153 aa2□□□□□ -2.09
SOX6-209ENST00000527840 C9orf116Q5BN46 136 aaPredicted RBP2□□□□□ -2.09
SOX6-209ENST00000527840 BVES-AS1Q5T3Y7 98 aa2□□□□□ -2.09
SOX6-209ENST00000527840 SPINK6Q6UWN8 80 aa2□□□□□ -2.09
SOX6-209ENST00000527840 FAM19A2Q8N3H0 131 aa2□□□□□ -2.09
SOX6-209ENST00000527840 LINC01600Q96MT4 127 aa2□□□□□ -2.09
SOX6-209ENST00000527840 MAP1LC3CQ9BXW4 147 aa2□□□□□ -2.09
SOX6-209ENST00000527840 VCX2Q9H322 139 aa2□□□□□ -2.09
SOX6-209ENST00000527840 NXT2Q9NPJ8 142 aaKnown RBP2□□□□□ -2.09
SOX6-209ENST00000527840 C6orf48Q9UBA6 75 aa2□□□□□ -2.09
SOX6-209ENST00000527840 CYSLTR1Q9Y271 337 aa2□□□□□ -2.09
SOX6-209ENST00000527840 LPAP08519 4548 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 MUC2Q02817 5179 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 TRBV30A0A0K0K1B3 111 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 FAM168BA1KXE4 195 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 A6NDN8 102 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 H3BRM9 83 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 K7ERU9 68 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 HINT1P49773 126 aaPredicted RBP1.99□□□□□ -2.09
SOX6-209ENST00000527840 KRTAP10-10P60014 251 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 RPL18AQ02543 176 aaKnown RBP1.99□□□□□ -2.09
SOX6-209ENST00000527840 HSD52Q0P140 79 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 VAMP3Q15836 100 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 OCIAD2Q56VL3 154 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 C2orf91Q6ZV80 131 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 GTF2H5Q6ZYL4 71 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 PHF5AQ7RTV0 110 aaKnown RBP1.99□□□□□ -2.09
SOX6-209ENST00000527840 BOD1L2Q8IYS8 172 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 LINC01561Q8N1V8 128 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 TOMM6Q96B49 74 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 TIMM17AQ99595 171 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 CST9LQ9H4G1 147 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 PSORS1C2Q9UIG4 136 aa1.99□□□□□ -2.09
SOX6-209ENST00000527840 NDUFC2-KCTD14E9PQ53 114 aa1.98□□□□□ -2.09
SOX6-209ENST00000527840 SCGB1A1P11684 91 aa1.98□□□□□ -2.09
SOX6-209ENST00000527840 HERVK_113P63121 156 aa1.98□□□□□ -2.09
SOX6-209ENST00000527840 C9orf129Q5T035 196 aaKnown RBP1.98□□□□□ -2.09
SOX6-209ENST00000527840 C2orf82Q6UX34 121 aa1.98□□□□□ -2.09
SOX6-209ENST00000527840 FA2HQ7L5A8 372 aa1.98□□□□□ -2.09
SOX6-209ENST00000527840 ERASQ7Z444 233 aa1.98□□□□□ -2.09
SOX6-209ENST00000527840 Q8IZM0 81 aa1.98□□□□□ -2.09
SOX6-209ENST00000527840 ATOH7Q8N100 152 aa1.98□□□□□ -2.09
SOX6-209ENST00000527840 HIGD1BQ9P298 99 aa1.98□□□□□ -2.09
SOX6-209ENST00000527840 CDKN2A-AS1Q9UH64 79 aa1.98□□□□□ -2.09
SOX6-209ENST00000527840 A0A096LNJ9 63 aa1.97□□□□□ -2.09
SOX6-209ENST00000527840 TINCRA0A1B0GVN0 87 aa1.97□□□□□ -2.09
SOX6-209ENST00000527840 LINC01549A6NIU2 74 aa1.97□□□□□ -2.09
SOX6-209ENST00000527840 K7EP34 96 aa1.97□□□□□ -2.09
SOX6-209ENST00000527840 HBDP02042 147 aa1.97□□□□□ -2.09
SOX6-209ENST00000527840 IGLV7-43P04211 117 aa1.97□□□□□ -2.09
SOX6-209ENST00000527840 TAL2Q16559 108 aa1.97□□□□□ -2.09
SOX6-209ENST00000527840 Q1RN00 199 aa1.97□□□□□ -2.09
SOX6-209ENST00000527840 C6orf226Q5I0X4 101 aa1.97□□□□□ -2.09
SOX6-209ENST00000527840 C1orf137Q5JT78 98 aa1.97□□□□□ -2.09
SOX6-209ENST00000527840 REG3GQ6UW15 175 aa1.97□□□□□ -2.09
SOX6-209ENST00000527840 FAM19A5Q7Z5A7 132 aaPredicted RBP1.97□□□□□ -2.09
SOX6-209ENST00000527840 SCGB3A1Q96QR1 104 aa1.97□□□□□ -2.09
SOX6-209ENST00000527840 GEMIN7Q9H840 131 aaKnown RBP1.97□□□□□ -2.09
SOX6-209ENST00000527840 TOMM7Q9P0U1 55 aa1.97□□□□□ -2.09
SOX6-209ENST00000527840 A0A1W2PPM0 123 aa1.96□□□□□ -2.1
SOX6-209ENST00000527840 F8VRH5 84 aa1.96□□□□□ -2.1
SOX6-209ENST00000527840 M0QXV9 152 aa1.96□□□□□ -2.1
SOX6-209ENST00000527840 ATP5LO75964 103 aa1.96□□□□□ -2.1
SOX6-209ENST00000527840 SPINK8P0C7L1 97 aa1.96□□□□□ -2.1
SOX6-209ENST00000527840 FABP2P12104 132 aa1.96□□□□□ -2.1
SOX6-209ENST00000527840 CXCL5P42830 114 aa1.96□□□□□ -2.1
SOX6-209ENST00000527840 CKS1BP61024 79 aa1.96□□□□□ -2.1
SOX6-209ENST00000527840 PMVKQ15126 192 aa1.96□□□□□ -2.1
SOX6-209ENST00000527840 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
SOX6-209ENST00000527840 IFI27L1Q96BM0 104 aa1.96□□□□□ -2.1
SOX6-209ENST00000527840 VPS25Q9BRG1 176 aa1.96□□□□□ -2.1
SOX6-209ENST00000527840 C22orf24Q9Y442 160 aa1.96□□□□□ -2.1
SOX6-209ENST00000527840 TRAV12-1A0A0B4J245 112 aa1.95□□□□□ -2.1
SOX6-209ENST00000527840 A0A1B0GWB2 263 aa1.95□□□□□ -2.1
SOX6-209ENST00000527840 F8W1H4 67 aa1.95□□□□□ -2.1
SOX6-209ENST00000527840 PLNP26678 52 aa1.95□□□□□ -2.1
SOX6-209ENST00000527840 UBE2BP63146 152 aa1.95□□□□□ -2.1
SOX6-209ENST00000527840 MRPL55Q7Z7F7 128 aaKnown RBP1.95□□□□□ -2.1
SOX6-209ENST00000527840 COX7B2Q8TF08 81 aa1.95□□□□□ -2.1
SOX6-209ENST00000527840 DIRC1Q969H9 104 aa1.95□□□□□ -2.1
SOX6-209ENST00000527840 XAGE1AQ9HD64 81 aa1.95□□□□□ -2.1
SOX6-209ENST00000527840 TP73-AS1Q9UF72 201 aa1.95□□□□□ -2.1
SOX6-209ENST00000527840 CHTOPQ9Y3Y2 248 aaKnown RBP1.95□□□□□ -2.1
SOX6-209ENST00000527840 C11orf86A6NJI1 115 aa1.94□□□□□ -2.1
SOX6-209ENST00000527840 TMEM238C9JI98 176 aa1.94□□□□□ -2.1
SOX6-209ENST00000527840 E9PLD3 99 aa1.94□□□□□ -2.1
SOX6-209ENST00000527840 J3QR89 54 aa1.94□□□□□ -2.1
SOX6-209ENST00000527840 ZNF861PO60384 105 aa1.94□□□□□ -2.1
SOX6-209ENST00000527840 DPM2O94777 84 aa1.94□□□□□ -2.1
SOX6-209ENST00000527840 IGKCP01834 107 aa1.94□□□□□ -2.1
SOX6-209ENST00000527840 SMIM13P0DJ93 91 aa1.94□□□□□ -2.1
SOX6-209ENST00000527840 ZNF22P17026 224 aaPredicted RBP1.94□□□□□ -2.1
SOX6-209ENST00000527840 CEND1Q8N111 149 aa1.94□□□□□ -2.1
SOX6-209ENST00000527840 SPCS1Q9Y6A9 102 aa1.94□□□□□ -2.1
SOX6-209ENST00000527840 IGLV1-50A0A075B6I6 118 aa1.93□□□□□ -2.1
SOX6-209ENST00000527840 A0A1B0GV72 72 aa1.93□□□□□ -2.1
SOX6-209ENST00000527840 RPL37AP8A6NKH3 93 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms