RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 Q6ZRX8 168 aa8.32□□□□□ -1.08
FGFR1-227ENST00000526570 ACANP16112 2415 aa8.31□□□□□ -1.08
FGFR1-227ENST00000526570 MRPL34Q9BQ48 92 aaKnown RBP8.31□□□□□ -1.08
FGFR1-227ENST00000526570 OBSCN-AS1Q96MR7 158 aa8.31□□□□□ -1.08
FGFR1-227ENST00000526570 CSAG1Q6PB30 78 aa8.31□□□□□ -1.08
FGFR1-227ENST00000526570 ST20-AS1Q8NBB2 130 aa8.3□□□□□ -1.08
FGFR1-227ENST00000526570 FAM229AH3BQW9 127 aa8.3□□□□□ -1.08
FGFR1-227ENST00000526570 LINC00167Q96N53 147 aa8.28□□□□□ -1.08
FGFR1-227ENST00000526570 OCR1Q9BZK8 76 aa8.28□□□□□ -1.08
FGFR1-227ENST00000526570 Q5VV11 94 aa8.28□□□□□ -1.08
FGFR1-227ENST00000526570 DMAC1Q96GE9 116 aa8.28□□□□□ -1.08
FGFR1-227ENST00000526570 Q8N9P0 234 aaPredicted RBP8.28□□□□□ -1.08
FGFR1-227ENST00000526570 KRTAP16-1A8MUX0 517 aa8.27□□□□□ -1.09
FGFR1-227ENST00000526570 LINC01556Q5JQF7 62 aa8.27□□□□□ -1.09
FGFR1-227ENST00000526570 IGLV6-57P01721 117 aa8.27□□□□□ -1.09
FGFR1-227ENST00000526570 EPG5Q9HCE0 2579 aa8.27□□□□□ -1.09
FGFR1-227ENST00000526570 ANKRD17O75179 2603 aaKnown RBP8.26□□□□□ -1.09
FGFR1-227ENST00000526570 CHD7Q9P2D1 2997 aa8.26□□□□□ -1.09
FGFR1-227ENST00000526570 A0A096LNT2 108 aa8.25□□□□□ -1.09
FGFR1-227ENST00000526570 PHF5AQ7RTV0 110 aaKnown RBP8.24□□□□□ -1.09
FGFR1-227ENST00000526570 PRRC2CQ9Y520 2896 aaKnown RBP8.24□□□□□ -1.09
FGFR1-227ENST00000526570 LINC01558Q9Y6Z2 57 aa8.24□□□□□ -1.09
FGFR1-227ENST00000526570 HTTP42858 3142 aa8.23□□□□□ -1.09
FGFR1-227ENST00000526570 C9orf163Q8N9P6 203 aa8.22□□□□□ -1.09
FGFR1-227ENST00000526570 C5orf42Q9H799 3197 aa8.21□□□□□ -1.1
FGFR1-227ENST00000526570 KLK9Q2XQG4 91 aa8.21□□□□□ -1.1
FGFR1-227ENST00000526570 GVQW2A0A096LPI5 108 aaPredicted RBP8.2□□□□□ -1.1
FGFR1-227ENST00000526570 C8orf17Q9NRJ1 99 aa8.2□□□□□ -1.1
FGFR1-227ENST00000526570 FAM104AQ969W3 186 aa8.19□□□□□ -1.1
FGFR1-227ENST00000526570 PRR26Q8N8Z3 221 aa8.19□□□□□ -1.1
FGFR1-227ENST00000526570 LINC00528Q8N1L1 170 aa8.17□□□□□ -1.1
FGFR1-227ENST00000526570 Q8NAQ8 132 aa8.17□□□□□ -1.1
FGFR1-227ENST00000526570 CHD9Q3L8U1 2897 aa8.16□□□□□ -1.1
FGFR1-227ENST00000526570 KCNQ1DNQ9H478 68 aa8.16□□□□□ -1.1
FGFR1-227ENST00000526570 KRTAP10-3P60369 221 aa8.16□□□□□ -1.1
FGFR1-227ENST00000526570 KRTAP1-3Q8IUG1 177 aa8.16□□□□□ -1.1
FGFR1-227ENST00000526570 IGLV7-46A0A075B6I9 117 aa8.15□□□□□ -1.1
FGFR1-227ENST00000526570 CHTF8P0CG12 524 aa8.14□□□□□ -1.11
FGFR1-227ENST00000526570 KRTAP10-11P60412 298 aa8.14□□□□□ -1.11
FGFR1-227ENST00000526570 H3BNG1 76 aa8.14□□□□□ -1.11
FGFR1-227ENST00000526570 IGFL1Q6UW32 110 aa8.13□□□□□ -1.11
FGFR1-227ENST00000526570 FLNBO75369 2602 aaKnown RBP8.13□□□□□ -1.11
FGFR1-227ENST00000526570 SPACA4Q8TDM5 124 aa8.13□□□□□ -1.11
FGFR1-227ENST00000526570 ASB16-AS1Q495Z4 193 aa8.12□□□□□ -1.11
FGFR1-227ENST00000526570 BRCA2P51587 3418 aa8.12□□□□□ -1.11
FGFR1-227ENST00000526570 SPINK7P58062 85 aa8.11□□□□□ -1.11
FGFR1-227ENST00000526570 A0A1B0GVX0 72 aa8.1□□□□□ -1.11
FGFR1-227ENST00000526570 F8P00451 2351 aa8.1□□□□□ -1.11
FGFR1-227ENST00000526570 K7EIL1 84 aa8.1□□□□□ -1.11
FGFR1-227ENST00000526570 Q8N377 158 aa8.1□□□□□ -1.11
FGFR1-227ENST00000526570 KRTAP1-1Q07627 177 aa8.08□□□□□ -1.12
FGFR1-227ENST00000526570 ZNF575Q86XF7 245 aa8.08□□□□□ -1.12
FGFR1-227ENST00000526570 WWC2-AS2Q96NR7 200 aa8.08□□□□□ -1.12
FGFR1-227ENST00000526570 CSNK1G2-AS1Q8NCQ2 148 aa8.08□□□□□ -1.12
FGFR1-227ENST00000526570 RANBP2P49792 3224 aaKnown RBP8.08□□□□□ -1.12
FGFR1-227ENST00000526570 NBDYA0A0U1RRE5 68 aa8.08□□□□□ -1.12
FGFR1-227ENST00000526570 A0A0D9SG42 100 aa8.07□□□□□ -1.12
FGFR1-227ENST00000526570 TLX1NBP0CAT3 122 aa8.07□□□□□ -1.12
FGFR1-227ENST00000526570 HECTD1Q9ULT8 2610 aa8.07□□□□□ -1.12
FGFR1-227ENST00000526570 A0A1W2PNM2 257 aa8.05□□□□□ -1.12
FGFR1-227ENST00000526570 Q96NJ1 140 aa8.05□□□□□ -1.12
FGFR1-227ENST00000526570 MKI67P46013 3256 aaKnown RBP8.03□□□□□ -1.12
FGFR1-227ENST00000526570 USP24Q9UPU5 2620 aa8.03□□□□□ -1.12
FGFR1-227ENST00000526570 RTL8CO15255 209 aa8.02□□□□□ -1.12
FGFR1-227ENST00000526570 C19orf73Q9NVV2 129 aa8.02□□□□□ -1.12
FGFR1-227ENST00000526570 A0A1B0GU33 70 aa8.02□□□□□ -1.13
FGFR1-227ENST00000526570 IGLV1-50A0A075B6I6 118 aa8.01□□□□□ -1.13
FGFR1-227ENST00000526570 LAMA3Q16787 3333 aa8□□□□□ -1.13
FGFR1-227ENST00000526570 DSCR10P59022 87 aa8□□□□□ -1.13
FGFR1-227ENST00000526570 A0A0G2JQZ4 141 aa7.99□□□□□ -1.13
FGFR1-227ENST00000526570 A0A1W2PNN7 141 aa7.99□□□□□ -1.13
FGFR1-227ENST00000526570 A6NN06 94 aa7.97□□□□□ -1.13
FGFR1-227ENST00000526570 GIG44P09565 113 aaPredicted RBP7.97□□□□□ -1.13
FGFR1-227ENST00000526570 MGAM2Q2M2H8 2515 aa7.97□□□□□ -1.13
FGFR1-227ENST00000526570 TRANK1O15050 2925 aa7.97□□□□□ -1.13
FGFR1-227ENST00000526570 DNAH10OSP0CZ25 163 aa7.97□□□□□ -1.13
FGFR1-227ENST00000526570 IGLV5-48A0A075B6I7 105 aa7.96□□□□□ -1.13
FGFR1-227ENST00000526570 FAM168BA1KXE4 195 aa7.96□□□□□ -1.14
FGFR1-227ENST00000526570 C15orf56Q8N910 161 aa7.95□□□□□ -1.14
FGFR1-227ENST00000526570 PLA2G2DQ9UNK4 145 aa7.95□□□□□ -1.14
FGFR1-227ENST00000526570 HRES1P13985 223 aa7.94□□□□□ -1.14
FGFR1-227ENST00000526570 LINC00483Q53H64 154 aa7.92□□□□□ -1.14
FGFR1-227ENST00000526570 Q8N1X5 172 aa7.91□□□□□ -1.14
FGFR1-227ENST00000526570 CAMK2N1Q7Z7J9 78 aa7.88□□□□□ -1.15
FGFR1-227ENST00000526570 LAMA2P24043 3122 aaKnown RBP7.87□□□□□ -1.15
FGFR1-227ENST00000526570 SPRR4Q96PI1 79 aa7.87□□□□□ -1.15
FGFR1-227ENST00000526570 ATRQ13535 2644 aa7.87□□□□□ -1.15
FGFR1-227ENST00000526570 SEC61BP60468 96 aaKnown RBP7.87□□□□□ -1.15
FGFR1-227ENST00000526570 A0A0C4DFX4 3053 aa7.86□□□□□ -1.15
FGFR1-227ENST00000526570 LINC00612Q8N6U2 182 aa7.86□□□□□ -1.15
FGFR1-227ENST00000526570 ROMO1P60602 79 aa7.85□□□□□ -1.15
FGFR1-227ENST00000526570 MAST4O15021 2626 aa7.85□□□□□ -1.15
FGFR1-227ENST00000526570 NDUFAF8A1L188 74 aa7.83□□□□□ -1.16
FGFR1-227ENST00000526570 TYMSOSQ8TAI1 123 aa7.83□□□□□ -1.16
FGFR1-227ENST00000526570 PRR34Q9NV39 138 aa7.82□□□□□ -1.16
FGFR1-227ENST00000526570 HELZ2Q9BYK8 2649 aaKnown RBP7.82□□□□□ -1.16
FGFR1-227ENST00000526570 FLNAP21333 2647 aaKnown RBP7.81□□□□□ -1.16
FGFR1-227ENST00000526570 CNBPP62633 177 aaKnown RBP7.81□□□□□ -1.16
FGFR1-227ENST00000526570 IGLV7-43P04211 117 aa7.8□□□□□ -1.16
FGFR1-227ENST00000526570 KRTAP25-1Q3LHN0 102 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 260.1 ms