RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 LOC400499M0QZD8 3231 aa1.92□□□□□ -2.1
COPB1-205ENST00000526527 DOCK10Q96BY6 2186 aa1.92□□□□□ -2.1
COPB1-205ENST00000526527 MUC4Q99102 2169 aa1.92□□□□□ -2.1
COPB1-205ENST00000526527 SHANK1Q9Y566 2161 aa1.92□□□□□ -2.1
COPB1-205ENST00000526527 DOPEY2Q9Y3R5 2298 aa1.92□□□□□ -2.1
COPB1-205ENST00000526527 LAMA5O15230 3695 aa1.92□□□□□ -2.1
COPB1-205ENST00000526527 HIVEP3Q5T1R4 2406 aa1.91□□□□□ -2.1
COPB1-205ENST00000526527 FLNCQ14315 2725 aa1.91□□□□□ -2.1
COPB1-205ENST00000526527 NBEAQ8NFP9 2946 aa1.91□□□□□ -2.1
COPB1-205ENST00000526527 SMG1Q96Q15 3661 aaKnown RBP1.91□□□□□ -2.1
COPB1-205ENST00000526527 IGLV4-69A0A075B6H9 119 aa1.91□□□□□ -2.1
COPB1-205ENST00000526527 A0A096LNJ9 63 aa1.91□□□□□ -2.1
COPB1-205ENST00000526527 CNBPP62633 177 aaKnown RBP1.91□□□□□ -2.1
COPB1-205ENST00000526527 DEFB112Q30KQ8 113 aa1.91□□□□□ -2.1
COPB1-205ENST00000526527 KRTAP25-1Q3LHN0 102 aa1.91□□□□□ -2.1
COPB1-205ENST00000526527 OBSCN-AS1Q96MR7 158 aa1.91□□□□□ -2.1
COPB1-205ENST00000526527 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
COPB1-205ENST00000526527 MYO7BQ6PIF6 2116 aa1.91□□□□□ -2.1
COPB1-205ENST00000526527 ATMQ13315 3056 aa1.91□□□□□ -2.1
COPB1-205ENST00000526527 TENM4Q6N022 2769 aa1.91□□□□□ -2.1
COPB1-205ENST00000526527 USP9YO00507 2555 aaPredicted RBP1.91□□□□□ -2.1
COPB1-205ENST00000526527 BOD1L1Q8NFC6 3051 aa1.9□□□□□ -2.1
COPB1-205ENST00000526527 POLQO75417 2590 aa1.9□□□□□ -2.11
COPB1-205ENST00000526527 IGLV4-60A0A075B6I1 120 aa1.9□□□□□ -2.11
COPB1-205ENST00000526527 IGLV2-18A0A075B6J9 118 aa1.9□□□□□ -2.11
COPB1-205ENST00000526527 IGKV2D-24A0A075B6R9 120 aa1.9□□□□□ -2.11
COPB1-205ENST00000526527 RNASE3P12724 160 aaKnown RBP1.9□□□□□ -2.11
COPB1-205ENST00000526527 CCL3L1P16619 93 aa1.9□□□□□ -2.11
COPB1-205ENST00000526527 HAMPP81172 84 aa1.9□□□□□ -2.11
COPB1-205ENST00000526527 SPINT4Q6UDR6 99 aa1.9□□□□□ -2.11
COPB1-205ENST00000526527 KLK9Q9UKQ9 250 aa1.9□□□□□ -2.11
COPB1-205ENST00000526527 UBR5O95071 2799 aaPredicted RBP1.9□□□□□ -2.11
COPB1-205ENST00000526527 ABCA12Q86UK0 2595 aa1.9□□□□□ -2.11
COPB1-205ENST00000526527 UNC79Q9P2D8 2635 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 ICE1Q9Y2F5 2266 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 SETXQ7Z333 2677 aaKnown RBP1.89□□□□□ -2.11
COPB1-205ENST00000526527 DNAJC13O75165 2243 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 DIDO1Q9BTC0 2240 aaKnown RBP1.89□□□□□ -2.11
COPB1-205ENST00000526527 SPENQ96T58 3664 aaKnown RBP1.89□□□□□ -2.11
COPB1-205ENST00000526527 IGKV2-28A0A075B6P5 120 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 TRGV4A0A0C4DH28 118 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 CPSF4LA6NMK7 179 aaKnown RBP1.89□□□□□ -2.11
COPB1-205ENST00000526527 PIN1P1O15428 100 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 IGKV1-17P01599 117 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 IGKV2D-28P01615 120 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 FREM3P0C091 2139 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 ZNF137PP52743 207 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 CCL18P55774 89 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 ESPL1Q14674 2120 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 KRTAP26-1Q6PEX3 210 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 PSORS1C2Q9UIG4 136 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 ANKHD1Q8IWZ3 2542 aaKnown RBP1.89□□□□□ -2.11
COPB1-205ENST00000526527 PCNX1Q96RV3 2341 aa1.89□□□□□ -2.11
COPB1-205ENST00000526527 MAST4O15021 2626 aa1.88□□□□□ -2.11
COPB1-205ENST00000526527 ZGRF1Q86YA3 2104 aa1.88□□□□□ -2.11
COPB1-205ENST00000526527 CCDC168Q8NDH2 2452 aa1.88□□□□□ -2.11
COPB1-205ENST00000526527 IGKV3-7A0A075B6H7 116 aa1.88□□□□□ -2.11
COPB1-205ENST00000526527 CLPSL1A2RUU4 121 aa1.88□□□□□ -2.11
COPB1-205ENST00000526527 MRPL33O75394 65 aaKnown RBP1.88□□□□□ -2.11
COPB1-205ENST00000526527 CTSGP08311 255 aa1.88□□□□□ -2.11
COPB1-205ENST00000526527 COX6B1P14854 86 aa1.88□□□□□ -2.11
COPB1-205ENST00000526527 LY6EQ16553 131 aa1.88□□□□□ -2.11
COPB1-205ENST00000526527 DEFB114Q30KQ6 69 aa1.88□□□□□ -2.11
COPB1-205ENST00000526527 Q5W150 140 aa1.88□□□□□ -2.11
COPB1-205ENST00000526527 Q6ZTI0 123 aa1.88□□□□□ -2.11
COPB1-205ENST00000526527 AKAP6Q13023 2319 aa1.88□□□□□ -2.11
COPB1-205ENST00000526527 NUP214P35658 2090 aaPredicted RBP1.87□□□□□ -2.11
COPB1-205ENST00000526527 PKDREJQ9NTG1 2253 aa1.87□□□□□ -2.11
COPB1-205ENST00000526527 PRRC2CQ9Y520 2896 aaKnown RBP1.87□□□□□ -2.11
COPB1-205ENST00000526527 RELNP78509 3460 aa1.87□□□□□ -2.11
COPB1-205ENST00000526527 LCE6AA0A183 80 aa1.87□□□□□ -2.11
COPB1-205ENST00000526527 ETDCA0A1B0GVM5 59 aa1.87□□□□□ -2.11
COPB1-205ENST00000526527 IGIPA6NJ69 53 aa1.87□□□□□ -2.11
COPB1-205ENST00000526527 NDUFA4O00483 81 aa1.87□□□□□ -2.11
COPB1-205ENST00000526527 UTP20O75691 2785 aaKnown RBP1.87□□□□□ -2.11
COPB1-205ENST00000526527 P0C880 135 aa1.87□□□□□ -2.11
COPB1-205ENST00000526527 SPATA8Q6RVD6 105 aa1.87□□□□□ -2.11
COPB1-205ENST00000526527 NAV2Q8IVL1 2488 aa1.87□□□□□ -2.11
COPB1-205ENST00000526527 CACNA1CQ13936 2221 aa1.87□□□□□ -2.11
COPB1-205ENST00000526527 MPDZO75970 2070 aa1.87□□□□□ -2.11
COPB1-205ENST00000526527 NCOA6Q14686 2063 aaPredicted RBP1.87□□□□□ -2.11
COPB1-205ENST00000526527 BSNQ9UPA5 3926 aa1.87□□□□□ -2.11
COPB1-205ENST00000526527 ASH1LQ9NR48 2969 aaKnown RBP1.86□□□□□ -2.11
COPB1-205ENST00000526527 SPG11Q96JI7 2443 aa1.86□□□□□ -2.11
COPB1-205ENST00000526527 LOC110117498A0A087WWA1 95 aa1.86□□□□□ -2.11
COPB1-205ENST00000526527 TRBV6-4A0A1B0GX49 114 aa1.86□□□□□ -2.11
COPB1-205ENST00000526527 TFF3Q07654 80 aa1.86□□□□□ -2.11
COPB1-205ENST00000526527 INTS1Q8N201 2190 aaKnown RBP1.86□□□□□ -2.11
COPB1-205ENST00000526527 ROS1P08922 2347 aa1.85□□□□□ -2.11
COPB1-205ENST00000526527 MYO9AB2RTY4 2548 aa1.85□□□□□ -2.11
COPB1-205ENST00000526527 CENPEQ02224 2701 aa1.85□□□□□ -2.11
COPB1-205ENST00000526527 PRR14LQ5THK1 2151 aa1.85□□□□□ -2.11
COPB1-205ENST00000526527 TRGV2A0A075B6R0 118 aa1.85□□□□□ -2.11
COPB1-205ENST00000526527 IGKV2-40A0A087WW87 121 aaPredicted RBP1.85□□□□□ -2.11
COPB1-205ENST00000526527 IGKV2D-40P01614 121 aaPredicted RBP1.85□□□□□ -2.11
COPB1-205ENST00000526527 FXYD4P59646 89 aa1.85□□□□□ -2.11
COPB1-205ENST00000526527 LINC00322Q6ZN03 302 aaPredicted RBP1.85□□□□□ -2.11
COPB1-205ENST00000526527 C9orf163Q8N9P6 203 aa1.85□□□□□ -2.11
COPB1-205ENST00000526527 TTTY10Q9BZA0 68 aa1.85□□□□□ -2.11
COPB1-205ENST00000526527 PLAC8Q9NZF1 115 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms