RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 EIF4EBP3O60516 100 aaPredicted RBP7.5□□□□□ -1.21
SMCO4-202ENST00000525141 RPL28P46779 137 aaKnown RBP7.5□□□□□ -1.21
SMCO4-202ENST00000525141 Q6ZVH6 145 aa7.5□□□□□ -1.21
SMCO4-202ENST00000525141 TMEM126AQ9H061 195 aa7.5□□□□□ -1.21
SMCO4-202ENST00000525141 SPANXB1Q9NS25 103 aaPredicted RBP7.5□□□□□ -1.21
SMCO4-202ENST00000525141 NCR3O14931 201 aa7.49□□□□□ -1.21
SMCO4-202ENST00000525141 SPANXDQ9BXN6 97 aa7.49□□□□□ -1.21
SMCO4-202ENST00000525141 PPDPFQ9H3Y8 114 aa7.49□□□□□ -1.21
SMCO4-202ENST00000525141 KCNQ1DNQ9H478 68 aa7.49□□□□□ -1.21
SMCO4-202ENST00000525141 SPANXCQ9NY87 97 aa7.49□□□□□ -1.21
SMCO4-202ENST00000525141 NPC2P61916 151 aa7.48□□□□□ -1.21
SMCO4-202ENST00000525141 JOSD1Q15040 202 aaPredicted RBP7.48□□□□□ -1.21
SMCO4-202ENST00000525141 KRTAP13-1Q8IUC0 172 aa7.48□□□□□ -1.21
SMCO4-202ENST00000525141 COPS9Q8WXC6 57 aa7.48□□□□□ -1.21
SMCO4-202ENST00000525141 TRBV10-3A0A0K0K1G6 114 aa7.47□□□□□ -1.21
SMCO4-202ENST00000525141 PRYO14603 147 aa7.47□□□□□ -1.21
SMCO4-202ENST00000525141 IFITM1P13164 125 aa7.47□□□□□ -1.21
SMCO4-202ENST00000525141 S100A12P80511 92 aa7.47□□□□□ -1.21
SMCO4-202ENST00000525141 IGLV6-57P01721 117 aa7.46□□□□□ -1.22
SMCO4-202ENST00000525141 DDTP30046 118 aa7.46□□□□□ -1.22
SMCO4-202ENST00000525141 SPRR1AP35321 89 aa7.46□□□□□ -1.22
SMCO4-202ENST00000525141 UBE2AP49459 152 aa7.46□□□□□ -1.22
SMCO4-202ENST00000525141 LINC00518Q8N0U6 118 aa7.46□□□□□ -1.22
SMCO4-202ENST00000525141 S100A7L2Q5SY68 101 aa7.45□□□□□ -1.22
SMCO4-202ENST00000525141 FAM19A1Q7Z5A9 133 aa7.45□□□□□ -1.22
SMCO4-202ENST00000525141 LINC00337Q8N6G1 96 aa7.45□□□□□ -1.22
SMCO4-202ENST00000525141 KRTAP4-16G5E9R7 235 aaPredicted RBP7.44□□□□□ -1.22
SMCO4-202ENST00000525141 DLEU1O43261 78 aa7.44□□□□□ -1.22
SMCO4-202ENST00000525141 COX8AP10176 69 aa7.44□□□□□ -1.22
SMCO4-202ENST00000525141 CBY1Q9Y3M2 126 aa7.44□□□□□ -1.22
SMCO4-202ENST00000525141 MUSTN1Q8IVN3 82 aa7.43□□□□□ -1.22
SMCO4-202ENST00000525141 PRLHP81277 87 aa7.42□□□□□ -1.22
SMCO4-202ENST00000525141 VAMP8Q9BV40 100 aa7.42□□□□□ -1.22
SMCO4-202ENST00000525141 SPATA45Q537H7 98 aa7.41□□□□□ -1.22
SMCO4-202ENST00000525141 PYY3Q5JQD4 70 aa7.41□□□□□ -1.22
SMCO4-202ENST00000525141 PAM16Q9Y3D7 125 aa7.41□□□□□ -1.22
SMCO4-202ENST00000525141 TRAV23DV6A0A075B6W5 121 aa7.4□□□□□ -1.22
SMCO4-202ENST00000525141 A0A087X002 238 aa7.4□□□□□ -1.22
SMCO4-202ENST00000525141 ETDCA0A1B0GVM5 59 aa7.4□□□□□ -1.22
SMCO4-202ENST00000525141 OR13C6PQ8NH95 151 aa7.4□□□□□ -1.22
SMCO4-202ENST00000525141 ANAPC11Q9NYG5 84 aa7.4□□□□□ -1.22
SMCO4-202ENST00000525141 B5MCH6 92 aa7.39□□□□□ -1.23
SMCO4-202ENST00000525141 C14orf144Q96I85 54 aa7.39□□□□□ -1.23
SMCO4-202ENST00000525141 ZNF73O43830 326 aaPredicted RBP7.38□□□□□ -1.23
SMCO4-202ENST00000525141 HIGD2AQ9BW72 106 aa7.38□□□□□ -1.23
SMCO4-202ENST00000525141 RPL13AP40429 203 aaKnown RBP7.37□□□□□ -1.23
SMCO4-202ENST00000525141 SLC25A34Q6PIV7 304 aa7.37□□□□□ -1.23
SMCO4-202ENST00000525141 HIGD1BQ9P298 99 aa7.37□□□□□ -1.23
SMCO4-202ENST00000525141 HINT1P49773 126 aaPredicted RBP7.36□□□□□ -1.23
SMCO4-202ENST00000525141 KRTAP13-2Q52LG2 175 aa7.36□□□□□ -1.23
SMCO4-202ENST00000525141 Q6ZRX8 168 aa7.36□□□□□ -1.23
SMCO4-202ENST00000525141 TRAV13-2A0A0B4J235 113 aa7.35□□□□□ -1.23
SMCO4-202ENST00000525141 FAM229BQ4G0N7 80 aa7.35□□□□□ -1.23
SMCO4-202ENST00000525141 SMCR5Q8TEV8 140 aa7.35□□□□□ -1.23
SMCO4-202ENST00000525141 HIST1H4GQ99525 98 aa7.35□□□□□ -1.23
SMCO4-202ENST00000525141 A4D1N5 150 aa7.34□□□□□ -1.23
SMCO4-202ENST00000525141 A6NDN8 102 aa7.34□□□□□ -1.23
SMCO4-202ENST00000525141 TSPAN13O95857 204 aa7.34□□□□□ -1.23
SMCO4-202ENST00000525141 CRYGAP11844 174 aa7.34□□□□□ -1.23
SMCO4-202ENST00000525141 Q9BRP9 147 aa7.34□□□□□ -1.23
SMCO4-202ENST00000525141 ZNF706Q9Y5V0 76 aaPredicted RBP7.34□□□□□ -1.23
SMCO4-202ENST00000525141 TRBV7-6A0A0J9YX20 115 aa7.33□□□□□ -1.24
SMCO4-202ENST00000525141 SPRR4Q96PI1 79 aa7.33□□□□□ -1.24
SMCO4-202ENST00000525141 C2orf91Q6ZV80 131 aa7.32□□□□□ -1.24
SMCO4-202ENST00000525141 PRR4Q16378 134 aa7.31□□□□□ -1.24
SMCO4-202ENST00000525141 TAL2Q16559 108 aa7.31□□□□□ -1.24
SMCO4-202ENST00000525141 C6orf99Q4VX62 202 aa7.31□□□□□ -1.24
SMCO4-202ENST00000525141 TYMSOSQ8TAI1 123 aa7.31□□□□□ -1.24
SMCO4-202ENST00000525141 ERC2-IT1O76042 136 aa7.3□□□□□ -1.24
SMCO4-202ENST00000525141 ELOF1P60002 83 aaKnown RBP7.3□□□□□ -1.24
SMCO4-202ENST00000525141 LCE1DQ5T752 114 aa7.3□□□□□ -1.24
SMCO4-202ENST00000525141 DHRS4-AS1Q9P1J3 65 aa7.3□□□□□ -1.24
SMCO4-202ENST00000525141 MUC2Q02817 5179 aa7.3□□□□□ -1.24
SMCO4-202ENST00000525141 SMIM6P0DI80 62 aa7.29□□□□□ -1.24
SMCO4-202ENST00000525141 COX7BP24311 80 aa7.29□□□□□ -1.24
SMCO4-202ENST00000525141 LINC00483Q53H64 154 aa7.28□□□□□ -1.24
SMCO4-202ENST00000525141 SMIM11BQ8TCY0 68 aa7.28□□□□□ -1.24
SMCO4-202ENST00000525141 A0A1B0GWB2 263 aa7.27□□□□□ -1.25
SMCO4-202ENST00000525141 CEND1Q8N111 149 aa7.27□□□□□ -1.25
SMCO4-202ENST00000525141 LOC105371267A0A1B0GV96 52 aa7.26□□□□□ -1.25
SMCO4-202ENST00000525141 CFC1BP0CG36 223 aa7.26□□□□□ -1.25
SMCO4-202ENST00000525141 CFC1P0CG37 223 aa7.26□□□□□ -1.25
SMCO4-202ENST00000525141 GAGE2AQ6NT46 116 aa7.26□□□□□ -1.25
SMCO4-202ENST00000525141 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
SMCO4-202ENST00000525141 UQCR10Q9UDW1 63 aa7.26□□□□□ -1.25
SMCO4-202ENST00000525141 VAMP3Q15836 100 aa7.25□□□□□ -1.25
SMCO4-202ENST00000525141 C3orf22Q8N5N4 141 aa7.24□□□□□ -1.25
SMCO4-202ENST00000525141 C12orf57Q99622 126 aa7.24□□□□□ -1.25
SMCO4-202ENST00000525141 A0A0B4J2C4 111 aa7.23□□□□□ -1.25
SMCO4-202ENST00000525141 TMEM238LA0A1B0GVL6 79 aa7.23□□□□□ -1.25
SMCO4-202ENST00000525141 ST20-AS1Q8NBB2 130 aa7.23□□□□□ -1.25
SMCO4-202ENST00000525141 RAB37Q96AX2 223 aa7.23□□□□□ -1.25
SMCO4-202ENST00000525141 SPRR1BP22528 89 aa7.22□□□□□ -1.25
SMCO4-202ENST00000525141 CTAG1AP78358 180 aa7.22□□□□□ -1.25
SMCO4-202ENST00000525141 HSD52Q0P140 79 aa7.22□□□□□ -1.25
SMCO4-202ENST00000525141 LINC00304Q8N9R0 145 aa7.22□□□□□ -1.25
SMCO4-202ENST00000525141 RETNLBQ9BQ08 111 aa7.22□□□□□ -1.25
SMCO4-202ENST00000525141 NHP2Q9NX24 153 aaKnown RBP7.22□□□□□ -1.25
SMCO4-202ENST00000525141 BVES-AS1Q5T3Y7 98 aa7.21□□□□□ -1.26
SMCO4-202ENST00000525141 PRO1933Q9H354 126 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms