RNA–Protein interactions for RNA: ENST00000523805.5

PTK2-253, Transcript of protein tyrosine kinase 2, human

TSL 3

Gene PTK2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-253	ENST00000523805	CEND1	Q8N111	149 aa		4.93	□□□□□ -1.62
PTK2-253	ENST00000523805	COPS9	Q8WXC6	57 aa		4.93	□□□□□ -1.62
PTK2-253	ENST00000523805	TOMM7	Q9P0U1	55 aa		4.93	□□□□□ -1.62
PTK2-253	ENST00000523805	PSORS1C2	Q9UIG4	136 aa		4.93	□□□□□ -1.62
PTK2-253	ENST00000523805		F8WDY8	70 aa		4.92	□□□□□ -1.62
PTK2-253	ENST00000523805	CKS1B	P61024	79 aa		4.92	□□□□□ -1.62
PTK2-253	ENST00000523805	BATF	Q16520	125 aa		4.92	□□□□□ -1.62
PTK2-253	ENST00000523805	GAGE2E	Q4V326	116 aa		4.92	□□□□□ -1.62
PTK2-253	ENST00000523805	C2orf48	Q96LS8	159 aa		4.92	□□□□□ -1.62
PTK2-253	ENST00000523805	SPANXD	Q9BXN6	97 aa		4.92	□□□□□ -1.62
PTK2-253	ENST00000523805	PPDPF	Q9H3Y8	114 aa		4.92	□□□□□ -1.62
PTK2-253	ENST00000523805	SPANXC	Q9NY87	97 aa		4.92	□□□□□ -1.62
PTK2-253	ENST00000523805	GAGE2D	Q9UEU5	116 aa		4.92	□□□□□ -1.62
PTK2-253	ENST00000523805	IFITM1	P13164	125 aa		4.91	□□□□□ -1.62
PTK2-253	ENST00000523805	KRTAP10-8	P60410	259 aa		4.91	□□□□□ -1.62
PTK2-253	ENST00000523805	RPL24	P83731	157 aa	Known RBP	4.91	□□□□□ -1.62
PTK2-253	ENST00000523805	C10orf25	Q5T742	122 aa		4.91	□□□□□ -1.62
PTK2-253	ENST00000523805	LITAF	Q99732	161 aa		4.91	□□□□□ -1.62
PTK2-253	ENST00000523805	COX17	Q14061	63 aa		4.9	□□□□□ -1.63
PTK2-253	ENST00000523805	KIAA0087	Q14695	138 aa		4.9	□□□□□ -1.63
PTK2-253	ENST00000523805	MEIG1	Q5JSS6	88 aa		4.9	□□□□□ -1.63
PTK2-253	ENST00000523805	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.9	□□□□□ -1.63
PTK2-253	ENST00000523805	KRTAP11-1	Q8IUC1	163 aa		4.9	□□□□□ -1.63
PTK2-253	ENST00000523805	C6orf48	Q9UBA6	75 aa		4.9	□□□□□ -1.63
PTK2-253	ENST00000523805	FXYD2	P54710	66 aa		4.89	□□□□□ -1.63
PTK2-253	ENST00000523805	UBE2B	P63146	152 aa		4.89	□□□□□ -1.63
PTK2-253	ENST00000523805	C2orf82	Q6UX34	121 aa		4.89	□□□□□ -1.63
PTK2-253	ENST00000523805	PRR26	Q8N8Z3	221 aa		4.89	□□□□□ -1.63
PTK2-253	ENST00000523805	TRBV30	A0A0K0K1B3	111 aa		4.88	□□□□□ -1.63
PTK2-253	ENST00000523805		A0A1B0GWB2	263 aa		4.88	□□□□□ -1.63
PTK2-253	ENST00000523805		M0QXV9	152 aa		4.88	□□□□□ -1.63
PTK2-253	ENST00000523805	IGLV7-43	P04211	117 aa		4.88	□□□□□ -1.63
PTK2-253	ENST00000523805	SMIM13	P0DJ93	91 aa		4.88	□□□□□ -1.63
PTK2-253	ENST00000523805	ADAMTSL4-AS1	Q5T5F5	129 aa		4.88	□□□□□ -1.63
PTK2-253	ENST00000523805	ERG28	Q9UKR5	140 aa		4.88	□□□□□ -1.63
PTK2-253	ENST00000523805	LINC00158	P58513	81 aa		4.87	□□□□□ -1.63
PTK2-253	ENST00000523805	MUSTN1	Q8IVN3	82 aa		4.87	□□□□□ -1.63
PTK2-253	ENST00000523805	LINC00308	Q8TCZ7	52 aa		4.87	□□□□□ -1.63
PTK2-253	ENST00000523805	NHP2	Q9NX24	153 aa	Known RBP	4.87	□□□□□ -1.63
PTK2-253	ENST00000523805	TNXB	P22105	4242 aa		4.86	□□□□□ -1.63
PTK2-253	ENST00000523805		A0A0B4J2C4	111 aa		4.86	□□□□□ -1.63
PTK2-253	ENST00000523805	DIRC1	Q969H9	104 aa		4.86	□□□□□ -1.63
PTK2-253	ENST00000523805	LOC107984156	A0A0G2JMH3	177 aa		4.85	□□□□□ -1.63
PTK2-253	ENST00000523805		A4D1N5	150 aa		4.85	□□□□□ -1.63
PTK2-253	ENST00000523805		H0Y9J4	135 aa		4.85	□□□□□ -1.63
PTK2-253	ENST00000523805	TAX1BP3	O14907	124 aa		4.85	□□□□□ -1.63
PTK2-253	ENST00000523805	PFN2	P35080	140 aa		4.85	□□□□□ -1.63
PTK2-253	ENST00000523805	KRTAP7-1	Q8IUC3	87 aa		4.85	□□□□□ -1.63
PTK2-253	ENST00000523805	ARL17A	Q8IVW1	177 aa		4.85	□□□□□ -1.63
PTK2-253	ENST00000523805	MIR7-3HG	Q8N6C7	128 aa		4.85	□□□□□ -1.63
PTK2-253	ENST00000523805		A0A0U1RRA0	63 aa		4.84	□□□□□ -1.63
PTK2-253	ENST00000523805	CFC1B	P0CG36	223 aa		4.84	□□□□□ -1.63
PTK2-253	ENST00000523805	CFC1	P0CG37	223 aa		4.84	□□□□□ -1.63
PTK2-253	ENST00000523805	C9orf129	Q5T035	196 aa	Known RBP	4.84	□□□□□ -1.63
PTK2-253	ENST00000523805	DAND5	Q8N907	189 aa		4.84	□□□□□ -1.63
PTK2-253	ENST00000523805	RAB37	Q96AX2	223 aa		4.84	□□□□□ -1.63
PTK2-253	ENST00000523805	XAGE1A	Q9HD64	81 aa		4.84	□□□□□ -1.63
PTK2-253	ENST00000523805	PRO1854	Q9UHT4	67 aa		4.84	□□□□□ -1.63
PTK2-253	ENST00000523805	LRP2	P98164	4655 aa		4.84	□□□□□ -1.63
PTK2-253	ENST00000523805	NDUFC2-KCTD14	E9PQ53	114 aa		4.83	□□□□□ -1.64
PTK2-253	ENST00000523805		K7ERJ3	54 aa		4.83	□□□□□ -1.64
PTK2-253	ENST00000523805	TLX1NB	P0CAT3	122 aa		4.83	□□□□□ -1.64
PTK2-253	ENST00000523805	NPC2	P61916	151 aa		4.83	□□□□□ -1.64
PTK2-253	ENST00000523805	SND1-IT1	Q9HBX3	110 aa		4.83	□□□□□ -1.64
PTK2-253	ENST00000523805	TRAV13-2	A0A0B4J235	113 aa		4.82	□□□□□ -1.64
PTK2-253	ENST00000523805	NDUFC2	O95298	119 aa		4.82	□□□□□ -1.64
PTK2-253	ENST00000523805	PRR4	Q16378	134 aa		4.82	□□□□□ -1.64
PTK2-253	ENST00000523805	LCE1E	Q5T753	118 aa		4.82	□□□□□ -1.64
PTK2-253	ENST00000523805	LYRM7	Q5U5X0	104 aa		4.82	□□□□□ -1.64
PTK2-253	ENST00000523805	SOSTDC1	Q6X4U4	206 aa		4.82	□□□□□ -1.64
PTK2-253	ENST00000523805	IGKV2D-30	A0A075B6S6	120 aa		4.81	□□□□□ -1.64
PTK2-253	ENST00000523805		A0A1B0GV90	55 aa		4.81	□□□□□ -1.64
PTK2-253	ENST00000523805	KRTAP1-4	P0C5Y4	121 aa		4.81	□□□□□ -1.64
PTK2-253	ENST00000523805	IGLV1-50	A0A075B6I6	118 aa		4.8	□□□□□ -1.64
PTK2-253	ENST00000523805		A0A1W2PPM0	123 aa		4.8	□□□□□ -1.64
PTK2-253	ENST00000523805		H3BUT2	72 aa		4.8	□□□□□ -1.64
PTK2-253	ENST00000523805	TSPAN13	O95857	204 aa		4.8	□□□□□ -1.64
PTK2-253	ENST00000523805	FABP2	P12104	132 aa		4.8	□□□□□ -1.64
PTK2-253	ENST00000523805	GAGE10	A6NGK3	116 aa		4.79	□□□□□ -1.64
PTK2-253	ENST00000523805	RPL13A	P40429	203 aa	Known RBP	4.79	□□□□□ -1.64
PTK2-253	ENST00000523805		Q1RN00	199 aa		4.79	□□□□□ -1.64
PTK2-253	ENST00000523805	C22orf24	Q9Y442	160 aa		4.79	□□□□□ -1.64
PTK2-253	ENST00000523805	TRBV10-2	A0A0K0K1G8	114 aa		4.78	□□□□□ -1.64
PTK2-253	ENST00000523805	RPL37AP8	A6NKH3	93 aa		4.78	□□□□□ -1.64
PTK2-253	ENST00000523805	VAMP3	Q15836	100 aa		4.78	□□□□□ -1.64
PTK2-253	ENST00000523805	GTF2H5	Q6ZYL4	71 aa		4.78	□□□□□ -1.64
PTK2-253	ENST00000523805	TRBV20-1	A0A075B6N2	111 aa		4.77	□□□□□ -1.65
PTK2-253	ENST00000523805	IGKV2-28	A0A075B6P5	120 aa		4.77	□□□□□ -1.65
PTK2-253	ENST00000523805	ZNF861P	O60384	105 aa		4.77	□□□□□ -1.65
PTK2-253	ENST00000523805	IGKV2D-28	P01615	120 aa		4.77	□□□□□ -1.65
PTK2-253	ENST00000523805	COX6C	P09669	75 aa		4.77	□□□□□ -1.65
PTK2-253	ENST00000523805	PSMB2	P49721	201 aa		4.77	□□□□□ -1.65
PTK2-253	ENST00000523805	MRPL55	Q7Z7F7	128 aa	Known RBP	4.77	□□□□□ -1.65
PTK2-253	ENST00000523805	LINC00337	Q8N6G1	96 aa		4.77	□□□□□ -1.65
PTK2-253	ENST00000523805	CBY1	Q9Y3M2	126 aa		4.77	□□□□□ -1.65
PTK2-253	ENST00000523805	LPA	P08519	4548 aa		4.76	□□□□□ -1.65
PTK2-253	ENST00000523805		H7C2G1	150 aa		4.76	□□□□□ -1.65
PTK2-253	ENST00000523805		K7EP34	96 aa		4.76	□□□□□ -1.65
PTK2-253	ENST00000523805	NAA38	Q9BRA0	125 aa	Known RBP	4.76	□□□□□ -1.65
PTK2-253	ENST00000523805	TMEM126A	Q9H061	195 aa		4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms