RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 TRAV21A0A0B4J279 112 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 LCE6AA0A183 80 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 A0A1B0GUT8 65 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 LINC01546A6NGU7 62 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 IGIPA6NJ69 53 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 F8VRH5 84 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 M0R1W7 72 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 PIN1P1O15428 100 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 COX6B1P14854 86 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 SPINK7P58062 85 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 WFDC9Q8NEX5 89 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 COX7B2Q8TF08 81 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 AMELXQ99217 191 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 TIMM8BQ9Y5J9 83 aaPredicted RBP0.75□□□□□ -2.29
CPNE3-207ENST00000523588 STAB1Q9NY15 2570 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 C4BP0C0L5 1744 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 LMO7Q8WWI1 1683 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 LRRC37A3O60309 1634 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 CACNA1CQ13936 2221 aa0.74□□□□□ -2.29
CPNE3-207ENST00000523588 I3L3M4 83 aa0.74□□□□□ -2.29
CPNE3-207ENST00000523588 LY6G6CO95867 125 aa0.74□□□□□ -2.29
CPNE3-207ENST00000523588 CCL3L1P16619 93 aa0.74□□□□□ -2.29
CPNE3-207ENST00000523588 PLNP26678 52 aa0.74□□□□□ -2.29
CPNE3-207ENST00000523588 CCL18P55774 89 aa0.74□□□□□ -2.29
CPNE3-207ENST00000523588 SPRR4Q96PI1 79 aa0.74□□□□□ -2.29
CPNE3-207ENST00000523588 F5P12259 2224 aa0.73□□□□□ -2.29
CPNE3-207ENST00000523588 KMT2CQ8NEZ4 4911 aaKnown RBP0.73□□□□□ -2.29
CPNE3-207ENST00000523588 A0A087WTM6 91 aa0.73□□□□□ -2.29
CPNE3-207ENST00000523588 TRBV6-1A0A0K0K1D8 114 aa0.73□□□□□ -2.29
CPNE3-207ENST00000523588 LINC00959A0A1B0GUT2 108 aa0.73□□□□□ -2.29
CPNE3-207ENST00000523588 H0Y9P7 68 aa0.73□□□□□ -2.29
CPNE3-207ENST00000523588 RPL37P61927 97 aaKnown RBP0.73□□□□□ -2.29
CPNE3-207ENST00000523588 C10orf113Q5VZT2 155 aa0.73□□□□□ -2.29
CPNE3-207ENST00000523588 UBL5Q9BZL1 73 aa0.73□□□□□ -2.29
CPNE3-207ENST00000523588 R4GMQ9 66 aa0.73□□□□□ -2.29
CPNE3-207ENST00000523588 ABCA1O95477 2261 aa0.72□□□□□ -2.29
CPNE3-207ENST00000523588 CADP27708 2225 aa0.72□□□□□ -2.29
CPNE3-207ENST00000523588 BPTFQ12830 3046 aa0.72□□□□□ -2.29
CPNE3-207ENST00000523588 UQCR11O14957 56 aa0.72□□□□□ -2.29
CPNE3-207ENST00000523588 NDUFB1O75438 58 aa0.72□□□□□ -2.29
CPNE3-207ENST00000523588 NDUFA3O95167 84 aa0.72□□□□□ -2.29
CPNE3-207ENST00000523588 MGPP08493 103 aa0.72□□□□□ -2.29
CPNE3-207ENST00000523588 RPS27LQ71UM5 84 aaKnown RBP0.72□□□□□ -2.29
CPNE3-207ENST00000523588 GAFA1Q96PS6 74 aa0.72□□□□□ -2.29
CPNE3-207ENST00000523588 LINC00472Q9H8W2 130 aa0.72□□□□□ -2.29
CPNE3-207ENST00000523588 NDUFA4O00483 81 aa0.71□□□□□ -2.3
CPNE3-207ENST00000523588 TFF3Q07654 80 aa0.71□□□□□ -2.3
CPNE3-207ENST00000523588 DEFB112Q30KQ8 113 aa0.71□□□□□ -2.3
CPNE3-207ENST00000523588 Q96NJ1 140 aa0.71□□□□□ -2.3
CPNE3-207ENST00000523588 TMEM167BQ9NRX6 74 aa0.71□□□□□ -2.3
CPNE3-207ENST00000523588 URB1O60287 2271 aaKnown RBP0.71□□□□□ -2.3
CPNE3-207ENST00000523588 FRAS1Q86XX4 4008 aa0.7□□□□□ -2.3
CPNE3-207ENST00000523588 AHCTF1Q8WYP5 2266 aa0.7□□□□□ -2.3
CPNE3-207ENST00000523588 RYR1P21817 5038 aa0.7□□□□□ -2.3
CPNE3-207ENST00000523588 TRGV1A0A0A0MS02 117 aa0.7□□□□□ -2.3
CPNE3-207ENST00000523588 ETDCA0A1B0GVM5 59 aa0.7□□□□□ -2.3
CPNE3-207ENST00000523588 IAPPP10997 89 aa0.7□□□□□ -2.3
CPNE3-207ENST00000523588 HAMPP81172 84 aa0.7□□□□□ -2.3
CPNE3-207ENST00000523588 DEFB114Q30KQ6 69 aa0.7□□□□□ -2.3
CPNE3-207ENST00000523588 PDE4DIPQ5VU43 2346 aa0.69□□□□□ -2.3
CPNE3-207ENST00000523588 A0A1B0GU69 56 aa0.69□□□□□ -2.3
CPNE3-207ENST00000523588 H0YGX0 51 aa0.69□□□□□ -2.3
CPNE3-207ENST00000523588 COX7BP24311 80 aa0.69□□□□□ -2.3
CPNE3-207ENST00000523588 RPL38P63173 70 aaKnown RBP0.69□□□□□ -2.3
CPNE3-207ENST00000523588 COX17Q14061 63 aa0.69□□□□□ -2.3
CPNE3-207ENST00000523588 TTTY10Q9BZA0 68 aa0.69□□□□□ -2.3
CPNE3-207ENST00000523588 KCNQ1DNQ9H478 68 aa0.69□□□□□ -2.3
CPNE3-207ENST00000523588 ASXL3Q9C0F0 2248 aa0.69□□□□□ -2.3
CPNE3-207ENST00000523588 CPSF4LA6NMK7 179 aaKnown RBP0.68□□□□□ -2.3
CPNE3-207ENST00000523588 ACYP2P14621 99 aa0.68□□□□□ -2.3
CPNE3-207ENST00000523588 CRIP1P50238 77 aa0.68□□□□□ -2.3
CPNE3-207ENST00000523588 ARHGAP5-AS1Q96IT6 56 aa0.68□□□□□ -2.3
CPNE3-207ENST00000523588 TNRC6CQ9HCJ0 1690 aaKnown RBP0.68□□□□□ -2.3
CPNE3-207ENST00000523588 RYR2Q92736 4967 aa0.68□□□□□ -2.3
CPNE3-207ENST00000523588 PTPRQQ9UMZ3 2332 aa0.67□□□□□ -2.3
CPNE3-207ENST00000523588 LOC730098B7Z3J9 87 aa0.67□□□□□ -2.3
CPNE3-207ENST00000523588 G3V318 75 aa0.67□□□□□ -2.3
CPNE3-207ENST00000523588 LINC01590Q5TEZ4 76 aa0.67□□□□□ -2.3
CPNE3-207ENST00000523588 LINC00308Q8TCZ7 52 aa0.67□□□□□ -2.3
CPNE3-207ENST00000523588 SMIM2Q9BVW6 85 aa0.67□□□□□ -2.3
CPNE3-207ENST00000523588 CNFNQ9BYD5 112 aa0.67□□□□□ -2.3
CPNE3-207ENST00000523588 DOPEY2Q9Y3R5 2298 aa0.67□□□□□ -2.3
CPNE3-207ENST00000523588 SSC5DA1L4H1 1573 aa0.66□□□□□ -2.3
CPNE3-207ENST00000523588 CNOT1A5YKK6 2376 aaKnown RBP0.66□□□□□ -2.3
CPNE3-207ENST00000523588 DEFB131BA0A096LNP1 70 aa0.66□□□□□ -2.3
CPNE3-207ENST00000523588 H3BSH0 61 aa0.66□□□□□ -2.3
CPNE3-207ENST00000523588 NDUFA1O15239 70 aa0.66□□□□□ -2.3
CPNE3-207ENST00000523588 LINC00158P58513 81 aa0.66□□□□□ -2.3
CPNE3-207ENST00000523588 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
CPNE3-207ENST00000523588 SSBP3-AS1Q7Z2R9 100 aa0.66□□□□□ -2.3
CPNE3-207ENST00000523588 SMIM11BQ8TCY0 68 aa0.66□□□□□ -2.3
CPNE3-207ENST00000523588 SMR3AQ99954 134 aa0.66□□□□□ -2.3
CPNE3-207ENST00000523588 PRO3102Q9H379 93 aa0.66□□□□□ -2.3
CPNE3-207ENST00000523588 ALMS1Q8TCU4 4167 aa0.66□□□□□ -2.3
CPNE3-207ENST00000523588 ANKRD17O75179 2603 aaKnown RBP0.66□□□□□ -2.3
CPNE3-207ENST00000523588 NAV3Q8IVL0 2385 aa0.65□□□□□ -2.3
CPNE3-207ENST00000523588 VWFP04275 2813 aa0.65□□□□□ -2.3
CPNE3-207ENST00000523588 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.65□□□□□ -2.3
CPNE3-207ENST00000523588 GVQW2A0A096LPI5 108 aaPredicted RBP0.65□□□□□ -2.31
CPNE3-207ENST00000523588 Q6ZRX8 168 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms