RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 PLAC4Q8WY50 150 aa0.83□□□□□ -2.28
PCM1-219ENST00000523540 JMJD1CQ15652 2540 aa0.83□□□□□ -2.28
PCM1-219ENST00000523540 C4BP0C0L5 1744 aa0.83□□□□□ -2.28
PCM1-219ENST00000523540 ATP7AQ04656 1500 aa0.83□□□□□ -2.28
PCM1-219ENST00000523540 ZDBF2Q9HCK1 2354 aa0.83□□□□□ -2.28
PCM1-219ENST00000523540 TNRC6CQ9HCJ0 1690 aaKnown RBP0.82□□□□□ -2.28
PCM1-219ENST00000523540 A0A096LNT2 108 aa0.82□□□□□ -2.28
PCM1-219ENST00000523540 SMIM27A0A1W2PRY6 76 aa0.82□□□□□ -2.28
PCM1-219ENST00000523540 M0R1W7 72 aa0.82□□□□□ -2.28
PCM1-219ENST00000523540 LY6G6CO95867 125 aa0.82□□□□□ -2.28
PCM1-219ENST00000523540 SERF2P84101 59 aa0.82□□□□□ -2.28
PCM1-219ENST00000523540 SPINK13Q1W4C9 94 aa0.82□□□□□ -2.28
PCM1-219ENST00000523540 DEFB114Q30KQ6 69 aa0.82□□□□□ -2.28
PCM1-219ENST00000523540 SSBP3-AS1Q7Z2R9 100 aa0.82□□□□□ -2.28
PCM1-219ENST00000523540 NAV3Q8IVL0 2385 aa0.81□□□□□ -2.28
PCM1-219ENST00000523540 TENM3Q9P273 2699 aa0.81□□□□□ -2.28
PCM1-219ENST00000523540 PIN1P1O15428 100 aa0.81□□□□□ -2.28
PCM1-219ENST00000523540 LINC00575Q6W349 94 aa0.81□□□□□ -2.28
PCM1-219ENST00000523540 ASCC3Q8N3C0 2202 aaKnown RBP0.81□□□□□ -2.28
PCM1-219ENST00000523540 GCC2Q8IWJ2 1684 aa0.81□□□□□ -2.28
PCM1-219ENST00000523540 TNCP24821 2201 aa0.8□□□□□ -2.28
PCM1-219ENST00000523540 SAMD9LQ8IVG5 1584 aa0.8□□□□□ -2.28
PCM1-219ENST00000523540 SPTY2D1-AS1A0A0U1RR47 76 aa0.8□□□□□ -2.28
PCM1-219ENST00000523540 IGIPA6NJ69 53 aa0.8□□□□□ -2.28
PCM1-219ENST00000523540 CPSF4LA6NMK7 179 aaKnown RBP0.8□□□□□ -2.28
PCM1-219ENST00000523540 I3L3M4 83 aa0.8□□□□□ -2.28
PCM1-219ENST00000523540 KCNQ1DNQ9H478 68 aa0.8□□□□□ -2.28
PCM1-219ENST00000523540 LMO7Q8WWI1 1683 aa0.8□□□□□ -2.28
PCM1-219ENST00000523540 CNOT1A5YKK6 2376 aaKnown RBP0.79□□□□□ -2.28
PCM1-219ENST00000523540 DUOX1Q9NRD9 1551 aa0.79□□□□□ -2.28
PCM1-219ENST00000523540 KNTC1P50748 2209 aa0.79□□□□□ -2.28
PCM1-219ENST00000523540 ASXL3Q9C0F0 2248 aa0.79□□□□□ -2.28
PCM1-219ENST00000523540 URB1O60287 2271 aaKnown RBP0.79□□□□□ -2.28
PCM1-219ENST00000523540 ETDCA0A1B0GVM5 59 aa0.79□□□□□ -2.28
PCM1-219ENST00000523540 MRPL33O75394 65 aaKnown RBP0.79□□□□□ -2.28
PCM1-219ENST00000523540 COX6B1P14854 86 aa0.79□□□□□ -2.28
PCM1-219ENST00000523540 RPL37P61927 97 aaKnown RBP0.79□□□□□ -2.28
PCM1-219ENST00000523540 AHCTF1Q8WYP5 2266 aa0.78□□□□□ -2.28
PCM1-219ENST00000523540 FAM208BQ5VWN6 2430 aa0.78□□□□□ -2.28
PCM1-219ENST00000523540 UBE2DNLQ8IWF7 75 aa0.78□□□□□ -2.28
PCM1-219ENST00000523540 TIMM8BQ9Y5J9 83 aaPredicted RBP0.78□□□□□ -2.28
PCM1-219ENST00000523540 CACNA1EQ15878 2313 aa0.78□□□□□ -2.28
PCM1-219ENST00000523540 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.77□□□□□ -2.29
PCM1-219ENST00000523540 DEFB131BA0A096LNP1 70 aa0.77□□□□□ -2.29
PCM1-219ENST00000523540 LINC01546A6NGU7 62 aa0.77□□□□□ -2.29
PCM1-219ENST00000523540 H0YGX0 51 aa0.77□□□□□ -2.29
PCM1-219ENST00000523540 ZNF292O60281 2723 aa0.77□□□□□ -2.29
PCM1-219ENST00000523540 TRANK1O15050 2925 aa0.77□□□□□ -2.29
PCM1-219ENST00000523540 ASH1LQ9NR48 2969 aaKnown RBP0.77□□□□□ -2.29
PCM1-219ENST00000523540 CLTCL1P53675 1640 aa0.76□□□□□ -2.29
PCM1-219ENST00000523540 SPINK4O60575 86 aa0.76□□□□□ -2.29
PCM1-219ENST00000523540 SNRPGP62308 76 aaKnown RBP0.76□□□□□ -2.29
PCM1-219ENST00000523540 AHNAKQ09666 5890 aaKnown RBP0.75□□□□□ -2.29
PCM1-219ENST00000523540 NDUFA3O95167 84 aa0.75□□□□□ -2.29
PCM1-219ENST00000523540 FXYD6P3P58550 94 aa0.75□□□□□ -2.29
PCM1-219ENST00000523540 USMG5Q96IX5 58 aa0.75□□□□□ -2.29
PCM1-219ENST00000523540 CRIPTQ9P021 101 aa0.75□□□□□ -2.29
PCM1-219ENST00000523540 CHD9Q3L8U1 2897 aa0.75□□□□□ -2.29
PCM1-219ENST00000523540 CNTRLQ7Z7A1 2325 aa0.75□□□□□ -2.29
PCM1-219ENST00000523540 GOLGA4Q13439 2230 aaKnown RBP0.74□□□□□ -2.29
PCM1-219ENST00000523540 ZNF462Q96JM2 2506 aa0.74□□□□□ -2.29
PCM1-219ENST00000523540 I3L2K1 104 aa0.74□□□□□ -2.29
PCM1-219ENST00000523540 CRIP1P50238 77 aa0.74□□□□□ -2.29
PCM1-219ENST00000523540 PIGYQ3MUY2 71 aa0.74□□□□□ -2.29
PCM1-219ENST00000523540 TP53AIP1Q9HCN2 124 aa0.74□□□□□ -2.29
PCM1-219ENST00000523540 DSPP15924 2871 aaKnown RBP0.74□□□□□ -2.29
PCM1-219ENST00000523540 POLQO75417 2590 aa0.73□□□□□ -2.29
PCM1-219ENST00000523540 K7EIL1 84 aa0.73□□□□□ -2.29
PCM1-219ENST00000523540 LINC00158P58513 81 aa0.73□□□□□ -2.29
PCM1-219ENST00000523540 Q8IZM0 81 aa0.73□□□□□ -2.29
PCM1-219ENST00000523540 DEFB123Q8N688 67 aa0.73□□□□□ -2.29
PCM1-219ENST00000523540 MRPL34Q9BQ48 92 aaKnown RBP0.73□□□□□ -2.29
PCM1-219ENST00000523540 TMEM167BQ9NRX6 74 aa0.73□□□□□ -2.29
PCM1-219ENST00000523540 CDKN2A-AS1Q9UH64 79 aa0.73□□□□□ -2.29
PCM1-219ENST00000523540 IGF2RP11717 2491 aa0.73□□□□□ -2.29
PCM1-219ENST00000523540 DOPEY2Q9Y3R5 2298 aa0.72□□□□□ -2.29
PCM1-219ENST00000523540 K7EQZ3 153 aa0.72□□□□□ -2.29
PCM1-219ENST00000523540 CCL22O00626 93 aa0.72□□□□□ -2.29
PCM1-219ENST00000523540 COX6B2Q6YFQ2 88 aa0.72□□□□□ -2.29
PCM1-219ENST00000523540 LOC730098B7Z3J9 87 aa0.71□□□□□ -2.3
PCM1-219ENST00000523540 LINC00308Q8TCZ7 52 aa0.71□□□□□ -2.3
PCM1-219ENST00000523540 SMIM2Q9BVW6 85 aa0.71□□□□□ -2.3
PCM1-219ENST00000523540 CNFNQ9BYD5 112 aa0.71□□□□□ -2.3
PCM1-219ENST00000523540 PRO3102Q9H379 93 aa0.71□□□□□ -2.3
PCM1-219ENST00000523540 ALMS1Q8TCU4 4167 aa0.71□□□□□ -2.3
PCM1-219ENST00000523540 MEGF8Q7Z7M0 2845 aa0.7□□□□□ -2.3
PCM1-219ENST00000523540 PLCE1Q9P212 2302 aa0.7□□□□□ -2.3
PCM1-219ENST00000523540 REV3LO60673 3130 aa0.7□□□□□ -2.3
PCM1-219ENST00000523540 A0A0C4DFX4 3053 aa0.7□□□□□ -2.3
PCM1-219ENST00000523540 LYNX1G3V0Z9 82 aa0.7□□□□□ -2.3
PCM1-219ENST00000523540 COX6A2Q02221 97 aa0.7□□□□□ -2.3
PCM1-219ENST00000523540 TFF3Q07654 80 aa0.7□□□□□ -2.3
PCM1-219ENST00000523540 MINOS1Q5TGZ0 78 aa0.7□□□□□ -2.3
PCM1-219ENST00000523540 PRO0255Q9UI72 69 aa0.7□□□□□ -2.3
PCM1-219ENST00000523540 AKAP13Q12802 2813 aa0.7□□□□□ -2.3
PCM1-219ENST00000523540 PRRC2CQ9Y520 2896 aaKnown RBP0.69□□□□□ -2.3
PCM1-219ENST00000523540 H0YAA0 97 aa0.69□□□□□ -2.3
PCM1-219ENST00000523540 PTPRZ1P23471 2315 aaPredicted RBP0.69□□□□□ -2.3
PCM1-219ENST00000523540 PTPRQQ9UMZ3 2332 aa0.69□□□□□ -2.3
PCM1-219ENST00000523540 ATRQ13535 2644 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 1177.8 ms