RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 A0A1W2PPM0 123 aa5.86□□□□□ -1.47
SDCBP-212ENST00000523483 PRLHP81277 87 aa5.86□□□□□ -1.47
SDCBP-212ENST00000523483 FAM19A1Q7Z5A9 133 aa5.86□□□□□ -1.47
SDCBP-212ENST00000523483 SRRM2Q9UQ35 2752 aaKnown RBP5.86□□□□□ -1.47
SDCBP-212ENST00000523483 SPCS1Q9Y6A9 102 aa5.86□□□□□ -1.47
SDCBP-212ENST00000523483 REG3GQ6UW15 175 aa5.85□□□□□ -1.47
SDCBP-212ENST00000523483 PPDPFQ9H3Y8 114 aa5.85□□□□□ -1.47
SDCBP-212ENST00000523483 LRP1BQ9NZR2 4599 aa5.85□□□□□ -1.47
SDCBP-212ENST00000523483 HIGD2AQ9BW72 106 aa5.85□□□□□ -1.47
SDCBP-212ENST00000523483 PLAC8Q9NZF1 115 aa5.85□□□□□ -1.47
SDCBP-212ENST00000523483 RPL28P46779 137 aaKnown RBP5.84□□□□□ -1.47
SDCBP-212ENST00000523483 C1orf137Q5JT78 98 aa5.84□□□□□ -1.47
SDCBP-212ENST00000523483 IGLV5-37A0A075B6J1 123 aa5.84□□□□□ -1.47
SDCBP-212ENST00000523483 UBE2AP49459 152 aa5.84□□□□□ -1.47
SDCBP-212ENST00000523483 H3BMG7 143 aa5.83□□□□□ -1.48
SDCBP-212ENST00000523483 COX7BP24311 80 aa5.83□□□□□ -1.48
SDCBP-212ENST00000523483 LYRM7Q5U5X0 104 aa5.83□□□□□ -1.48
SDCBP-212ENST00000523483 TCL1BO95988 128 aa5.83□□□□□ -1.48
SDCBP-212ENST00000523483 DYNC1H1Q14204 4646 aaKnown RBP5.83□□□□□ -1.48
SDCBP-212ENST00000523483 KCNQ1DNQ9H478 68 aa5.82□□□□□ -1.48
SDCBP-212ENST00000523483 PSORS1C2Q9UIG4 136 aa5.82□□□□□ -1.48
SDCBP-212ENST00000523483 A0A1B0GV72 72 aa5.82□□□□□ -1.48
SDCBP-212ENST00000523483 SLC25A20O43772 301 aa5.82□□□□□ -1.48
SDCBP-212ENST00000523483 DNAL4O96015 105 aa5.82□□□□□ -1.48
SDCBP-212ENST00000523483 FAM218AQ96MZ4 157 aa5.82□□□□□ -1.48
SDCBP-212ENST00000523483 PRYO14603 147 aa5.82□□□□□ -1.48
SDCBP-212ENST00000523483 Q6ZSA8 131 aa5.82□□□□□ -1.48
SDCBP-212ENST00000523483 CBY1Q9Y3M2 126 aa5.82□□□□□ -1.48
SDCBP-212ENST00000523483 DEFB105AQ8NG35 78 aa5.81□□□□□ -1.48
SDCBP-212ENST00000523483 H0YGX0 51 aa5.8□□□□□ -1.48
SDCBP-212ENST00000523483 SNCGO76070 127 aa5.8□□□□□ -1.48
SDCBP-212ENST00000523483 ATXN8Q156A1 80 aa5.8□□□□□ -1.48
SDCBP-212ENST00000523483 C9JAW5 83 aa5.79□□□□□ -1.48
SDCBP-212ENST00000523483 XGP55808 180 aa5.79□□□□□ -1.48
SDCBP-212ENST00000523483 GTF2H5Q6ZYL4 71 aa5.79□□□□□ -1.48
SDCBP-212ENST00000523483 DNAH8Q96JB1 4490 aa5.79□□□□□ -1.48
SDCBP-212ENST00000523483 EPPK1P58107 5090 aaKnown RBP5.79□□□□□ -1.48
SDCBP-212ENST00000523483 EPM2AB3EWF7 344 aa5.78□□□□□ -1.48
SDCBP-212ENST00000523483 ELOF1P60002 83 aaKnown RBP5.78□□□□□ -1.48
SDCBP-212ENST00000523483 Q6ZRX8 168 aa5.78□□□□□ -1.48
SDCBP-212ENST00000523483 hADV29S1A0JD25 119 aa5.78□□□□□ -1.48
SDCBP-212ENST00000523483 Q6ZQY7 126 aa5.78□□□□□ -1.48
SDCBP-212ENST00000523483 TRBV20-1A0A075B6N2 111 aa5.77□□□□□ -1.49
SDCBP-212ENST00000523483 K7EP34 96 aa5.77□□□□□ -1.49
SDCBP-212ENST00000523483 BCE1O60756 84 aa5.77□□□□□ -1.49
SDCBP-212ENST00000523483 LINC00528Q8N1L1 170 aa5.77□□□□□ -1.49
SDCBP-212ENST00000523483 B5MCH6 92 aa5.77□□□□□ -1.49
SDCBP-212ENST00000523483 LINC00575Q6W349 94 aa5.77□□□□□ -1.49
SDCBP-212ENST00000523483 LST1O00453 97 aa5.77□□□□□ -1.49
SDCBP-212ENST00000523483 Q9BRP9 147 aa5.77□□□□□ -1.49
SDCBP-212ENST00000523483 ERC2-IT1O76042 136 aa5.76□□□□□ -1.49
SDCBP-212ENST00000523483 ST20-AS1Q8NBB2 130 aa5.76□□□□□ -1.49
SDCBP-212ENST00000523483 FAT1Q14517 4588 aa5.76□□□□□ -1.49
SDCBP-212ENST00000523483 SPRR1AP35321 89 aa5.76□□□□□ -1.49
SDCBP-212ENST00000523483 KRTAP4-16G5E9R7 235 aaPredicted RBP5.75□□□□□ -1.49
SDCBP-212ENST00000523483 SMCR5Q8TEV8 140 aa5.75□□□□□ -1.49
SDCBP-212ENST00000523483 RPL37AP61513 92 aaKnown RBP5.75□□□□□ -1.49
SDCBP-212ENST00000523483 GAGE2AQ6NT46 116 aa5.75□□□□□ -1.49
SDCBP-212ENST00000523483 DHRS4-AS1Q9P1J3 65 aa5.74□□□□□ -1.49
SDCBP-212ENST00000523483 KIAA1109Q2LD37 5005 aa5.73□□□□□ -1.49
SDCBP-212ENST00000523483 IGLV7-43P04211 117 aa5.73□□□□□ -1.49
SDCBP-212ENST00000523483 UBE2V1Q13404 147 aa5.73□□□□□ -1.49
SDCBP-212ENST00000523483 C3orf22Q8N5N4 141 aa5.73□□□□□ -1.49
SDCBP-212ENST00000523483 FLG2Q5D862 2391 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-212ENST00000523483 BAALC-AS2P0C853 105 aa5.73□□□□□ -1.49
SDCBP-212ENST00000523483 ORMDL1Q9P0S3 153 aa5.73□□□□□ -1.49
SDCBP-212ENST00000523483 ANAPC11Q9NYG5 84 aa5.72□□□□□ -1.49
SDCBP-212ENST00000523483 TRBV7-6A0A0J9YX20 115 aa5.72□□□□□ -1.49
SDCBP-212ENST00000523483 ZNF861PO60384 105 aa5.72□□□□□ -1.49
SDCBP-212ENST00000523483 TRACP01848 142 aa5.72□□□□□ -1.49
SDCBP-212ENST00000523483 LAMTOR3Q9UHA4 124 aa5.72□□□□□ -1.49
SDCBP-212ENST00000523483 APOBP04114 4563 aaKnown RBP5.72□□□□□ -1.49
SDCBP-212ENST00000523483 VPS13BQ7Z7G8 4022 aa5.71□□□□□ -1.5
SDCBP-212ENST00000523483 FAM229AH3BQW9 127 aa5.71□□□□□ -1.5
SDCBP-212ENST00000523483 INAFM2P0DMQ5 153 aa5.69□□□□□ -1.5
SDCBP-212ENST00000523483 ETDBQ3ZM63 59 aa5.69□□□□□ -1.5
SDCBP-212ENST00000523483 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-212ENST00000523483 ANKRD29Q8N6D5 301 aa5.69□□□□□ -1.5
SDCBP-212ENST00000523483 Q5VSD8 79 aa5.68□□□□□ -1.5
SDCBP-212ENST00000523483 IGLV9-49A0A0B4J1Y8 123 aa5.68□□□□□ -1.5
SDCBP-212ENST00000523483 A0A1B0GX51 115 aa5.68□□□□□ -1.5
SDCBP-212ENST00000523483 CDK2AP2O75956 126 aa5.67□□□□□ -1.5
SDCBP-212ENST00000523483 TMEM256-PLSCR3K7ERE1 68 aa5.67□□□□□ -1.5
SDCBP-212ENST00000523483 SMCPP49901 116 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-212ENST00000523483 KRTAP13-1Q8IUC0 172 aa5.67□□□□□ -1.5
SDCBP-212ENST00000523483 F8W1H4 67 aa5.66□□□□□ -1.5
SDCBP-212ENST00000523483 H0Y9J4 135 aa5.66□□□□□ -1.5
SDCBP-212ENST00000523483 Q8N377 158 aa5.66□□□□□ -1.5
SDCBP-212ENST00000523483 TEX49A0A1B0GTD5 131 aa5.66□□□□□ -1.5
SDCBP-212ENST00000523483 VPS25Q9BRG1 176 aa5.66□□□□□ -1.5
SDCBP-212ENST00000523483 PLA2G1BP04054 148 aaKnown RBP5.66□□□□□ -1.5
SDCBP-212ENST00000523483 C9orf153Q5TBE3 101 aa5.66□□□□□ -1.5
SDCBP-212ENST00000523483 F8WEM9 126 aa5.65□□□□□ -1.5
SDCBP-212ENST00000523483 PRO0461Q9UI25 63 aa5.65□□□□□ -1.5
SDCBP-212ENST00000523483 H3BT86 120 aa5.65□□□□□ -1.51
SDCBP-212ENST00000523483 GHRHP01286 108 aa5.65□□□□□ -1.51
SDCBP-212ENST00000523483 A0A0G2JQZ4 141 aa5.65□□□□□ -1.51
SDCBP-212ENST00000523483 NDUFV3P56181 108 aaKnown RBP5.64□□□□□ -1.51
SDCBP-212ENST00000523483 SPRR4Q96PI1 79 aa5.64□□□□□ -1.51
SDCBP-212ENST00000523483 HSPG2P98160 4391 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms