RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
SDCBP-211ENST00000523441 MAP1LC3CQ9BXW4 147 aa6.1□□□□□ -1.43
SDCBP-211ENST00000523441 CFC1P0CG37 223 aa6.09□□□□□ -1.43
SDCBP-211ENST00000523441 Q1RN00 199 aa6.09□□□□□ -1.43
SDCBP-211ENST00000523441 URB1-AS1Q96HZ7 61 aa6.09□□□□□ -1.43
SDCBP-211ENST00000523441 A0A0G2JQZ4 141 aa6.08□□□□□ -1.44
SDCBP-211ENST00000523441 HERV-K104P63124 156 aa6.08□□□□□ -1.44
SDCBP-211ENST00000523441 DEFB105AQ8NG35 78 aa6.08□□□□□ -1.44
SDCBP-211ENST00000523441 MIEN1Q9BRT3 115 aa6.08□□□□□ -1.44
SDCBP-211ENST00000523441 LAMTOR3Q9UHA4 124 aa6.08□□□□□ -1.44
SDCBP-211ENST00000523441 ZNF73O43830 326 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-211ENST00000523441 LINC00614P0C842 121 aa6.07□□□□□ -1.44
SDCBP-211ENST00000523441 S100PP25815 95 aa6.07□□□□□ -1.44
SDCBP-211ENST00000523441 SYNE2Q8WXH0 6885 aaKnown RBP6.07□□□□□ -1.44
SDCBP-211ENST00000523441 TRBV10-2A0A0K0K1G8 114 aa6.06□□□□□ -1.44
SDCBP-211ENST00000523441 MYMXA0A1B0GTQ4 84 aa6.06□□□□□ -1.44
SDCBP-211ENST00000523441 C1orf195Q5TG92 126 aa6.06□□□□□ -1.44
SDCBP-211ENST00000523441 KRTAP9-8Q9BYQ0 159 aa6.06□□□□□ -1.44
SDCBP-211ENST00000523441 SPANXB1Q9NS25 103 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-211ENST00000523441 LINC00587B1AMM8 73 aa6.05□□□□□ -1.44
SDCBP-211ENST00000523441 H0Y8G0 127 aa6.05□□□□□ -1.44
SDCBP-211ENST00000523441 SLC25A34Q6PIV7 304 aa6.05□□□□□ -1.44
SDCBP-211ENST00000523441 SEC11CQ9BY50 192 aa6.05□□□□□ -1.44
SDCBP-211ENST00000523441 RPS10P5Q9NQ39 176 aa6.05□□□□□ -1.44
SDCBP-211ENST00000523441 TMA7Q9Y2S6 64 aaKnown RBP6.05□□□□□ -1.44
SDCBP-211ENST00000523441 HINT1P49773 126 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-211ENST00000523441 TSPEAR-AS2P59090 65 aa6.04□□□□□ -1.44
SDCBP-211ENST00000523441 C18orf32Q8TCD1 76 aa6.04□□□□□ -1.44
SDCBP-211ENST00000523441 TAL2Q16559 108 aa6.03□□□□□ -1.44
SDCBP-211ENST00000523441 PRO1933Q9H354 126 aa6.03□□□□□ -1.44
SDCBP-211ENST00000523441 MACF1Q9UPN3 7388 aaKnown RBP6.02□□□□□ -1.45
SDCBP-211ENST00000523441 COMMD7Q86VX2 200 aa6.02□□□□□ -1.45
SDCBP-211ENST00000523441 OR13C6PQ8NH95 151 aa6.02□□□□□ -1.45
SDCBP-211ENST00000523441 SNAPINO95295 136 aa6.01□□□□□ -1.45
SDCBP-211ENST00000523441 SPRR1BP22528 89 aa6.01□□□□□ -1.45
SDCBP-211ENST00000523441 SMIM29Q86T20 159 aa6.01□□□□□ -1.45
SDCBP-211ENST00000523441 IFI27L1Q96BM0 104 aa6.01□□□□□ -1.45
SDCBP-211ENST00000523441 CD164Q04900 197 aa6□□□□□ -1.45
SDCBP-211ENST00000523441 ATP11AUNQ6ZP68 121 aa6□□□□□ -1.45
SDCBP-211ENST00000523441 PCP2Q8IVA1 136 aa6□□□□□ -1.45
SDCBP-211ENST00000523441 TRAPPC1Q9Y5R8 145 aa6□□□□□ -1.45
SDCBP-211ENST00000523441 COX19Q49B96 90 aa5.99□□□□□ -1.45
SDCBP-211ENST00000523441 CLLU1Q5K131 121 aa5.99□□□□□ -1.45
SDCBP-211ENST00000523441 SOSTDC1Q6X4U4 206 aa5.99□□□□□ -1.45
SDCBP-211ENST00000523441 LINC00518Q8N0U6 118 aa5.99□□□□□ -1.45
SDCBP-211ENST00000523441 TRAV12-1A0A0B4J245 112 aa5.98□□□□□ -1.45
SDCBP-211ENST00000523441 LOC107984156A0A0G2JMH3 177 aa5.98□□□□□ -1.45
SDCBP-211ENST00000523441 C5orf52A6NGY3 159 aa5.98□□□□□ -1.45
SDCBP-211ENST00000523441 NDUFC2O95298 119 aa5.98□□□□□ -1.45
SDCBP-211ENST00000523441 AKR1D1P51857 326 aa5.98□□□□□ -1.45
SDCBP-211ENST00000523441 ARL17AQ8IVW1 177 aa5.98□□□□□ -1.45
SDCBP-211ENST00000523441 DHRS4-AS1Q9P1J3 65 aa5.98□□□□□ -1.45
SDCBP-211ENST00000523441 LEPROTO15243 131 aa5.97□□□□□ -1.45
SDCBP-211ENST00000523441 MT2AP02795 61 aa5.97□□□□□ -1.45
SDCBP-211ENST00000523441 C20orf202A1L168 122 aa5.96□□□□□ -1.46
SDCBP-211ENST00000523441 J3QQQ9 107 aa5.96□□□□□ -1.46
SDCBP-211ENST00000523441 LGALS3P17931 250 aaKnown RBP5.96□□□□□ -1.46
SDCBP-211ENST00000523441 OBSCN-AS1Q96MR7 158 aa5.96□□□□□ -1.46
SDCBP-211ENST00000523441 COX7BP24311 80 aa5.95□□□□□ -1.46
SDCBP-211ENST00000523441 RHEBQ15382 184 aa5.95□□□□□ -1.46
SDCBP-211ENST00000523441 ADAMTSL4-AS1Q5T5F5 129 aa5.95□□□□□ -1.46
SDCBP-211ENST00000523441 TEX49A0A1B0GTD5 131 aa5.94□□□□□ -1.46
SDCBP-211ENST00000523441 MT1FP04733 61 aa5.94□□□□□ -1.46
SDCBP-211ENST00000523441 TMEM218A2RU14 115 aa5.93□□□□□ -1.46
SDCBP-211ENST00000523441 TCL1BO95988 128 aa5.93□□□□□ -1.46
SDCBP-211ENST00000523441 KRTAP10-10P60014 251 aa5.93□□□□□ -1.46
SDCBP-211ENST00000523441 Q5XG85 94 aa5.93□□□□□ -1.46
SDCBP-211ENST00000523441 PMCHL2Q9BQD1 86 aa5.93□□□□□ -1.46
SDCBP-211ENST00000523441 SMIM6P0DI80 62 aa5.92□□□□□ -1.46
SDCBP-211ENST00000523441 C6orf99Q4VX62 202 aa5.92□□□□□ -1.46
SDCBP-211ENST00000523441 CBY1Q9Y3M2 126 aa5.92□□□□□ -1.46
SDCBP-211ENST00000523441 TRBV20-1A0A075B6N2 111 aa5.91□□□□□ -1.46
SDCBP-211ENST00000523441 FAM236DA0A1B0GTK5 79 aa5.91□□□□□ -1.46
SDCBP-211ENST00000523441 FAM236CP0DP71 79 aa5.91□□□□□ -1.46
SDCBP-211ENST00000523441 A0A0J9YXY3 114 aa5.9□□□□□ -1.46
SDCBP-211ENST00000523441 ELOF1P60002 83 aaKnown RBP5.9□□□□□ -1.46
SDCBP-211ENST00000523441 HERVK_113P61574 105 aa5.9□□□□□ -1.46
SDCBP-211ENST00000523441 NMUP48645 174 aa5.89□□□□□ -1.47
SDCBP-211ENST00000523441 Q96NJ1 140 aa5.89□□□□□ -1.47
SDCBP-211ENST00000523441 HSBP1O75506 76 aa5.88□□□□□ -1.47
SDCBP-211ENST00000523441 UQCC3Q6UW78 93 aa5.88□□□□□ -1.47
SDCBP-211ENST00000523441 Q75L30 129 aa5.88□□□□□ -1.47
SDCBP-211ENST00000523441 CHCHD1Q96BP2 118 aaKnown RBP5.88□□□□□ -1.47
SDCBP-211ENST00000523441 KRTAP9-3Q9BYQ3 159 aa5.88□□□□□ -1.47
SDCBP-211ENST00000523441 LINC00308Q8TCZ7 52 aa5.87□□□□□ -1.47
SDCBP-211ENST00000523441 LINC00846Q9NV44 126 aa5.87□□□□□ -1.47
SDCBP-211ENST00000523441 SPANXCQ9NY87 97 aa5.87□□□□□ -1.47
SDCBP-211ENST00000523441 DPM2O94777 84 aa5.86□□□□□ -1.47
SDCBP-211ENST00000523441 C12orf57Q99622 126 aa5.86□□□□□ -1.47
SDCBP-211ENST00000523441 PLNP26678 52 aa5.85□□□□□ -1.47
SDCBP-211ENST00000523441 C10orf91Q5T1B1 145 aa5.85□□□□□ -1.47
SDCBP-211ENST00000523441 SPANXDQ9BXN6 97 aa5.85□□□□□ -1.47
SDCBP-211ENST00000523441 IGKCP01834 107 aa5.84□□□□□ -1.47
SDCBP-211ENST00000523441 FABP4P15090 132 aa5.84□□□□□ -1.47
SDCBP-211ENST00000523441 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
SDCBP-211ENST00000523441 F8WEM9 126 aa5.83□□□□□ -1.48
SDCBP-211ENST00000523441 LEPROTL1O95214 131 aa5.83□□□□□ -1.48
SDCBP-211ENST00000523441 C20orf166-AS1Q96NR2 134 aa5.83□□□□□ -1.48
SDCBP-211ENST00000523441 IGLV5-48A0A075B6I7 105 aa5.82□□□□□ -1.48
SDCBP-211ENST00000523441 SVBPQ8N300 66 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms