RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 NSD1Q96L73 2696 aaPredicted RBP8.77□□□□□ -1.01
PCDHGB1-201ENST00000523390 CHKB-CPT1BH3BT56 60 aa8.76□□□□□ -1.01
PCDHGB1-201ENST00000523390 DEFB116Q30KQ4 102 aa8.76□□□□□ -1.01
PCDHGB1-201ENST00000523390 Q6ZVQ6 151 aa8.76□□□□□ -1.01
PCDHGB1-201ENST00000523390 ZANQ9Y493 2812 aa8.76□□□□□ -1.01
PCDHGB1-201ENST00000523390 TRBV7-7A0A0K0K1E9 115 aa8.76□□□□□ -1.01
PCDHGB1-201ENST00000523390 CHTF8P0CG12 524 aa8.76□□□□□ -1.01
PCDHGB1-201ENST00000523390 ASH1LQ9NR48 2969 aaKnown RBP8.75□□□□□ -1.01
PCDHGB1-201ENST00000523390 PRR34Q9NV39 138 aa8.75□□□□□ -1.01
PCDHGB1-201ENST00000523390 C5orf47Q569G3 176 aa8.74□□□□□ -1.01
PCDHGB1-201ENST00000523390 PHF5AQ7RTV0 110 aaKnown RBP8.74□□□□□ -1.01
PCDHGB1-201ENST00000523390 FAM30AQ9NZY2 134 aa8.74□□□□□ -1.01
PCDHGB1-201ENST00000523390 FAM236DA0A1B0GTK5 79 aa8.72□□□□□ -1.01
PCDHGB1-201ENST00000523390 FAM236CP0DP71 79 aa8.72□□□□□ -1.01
PCDHGB1-201ENST00000523390 VPREB1P12018 145 aa8.72□□□□□ -1.01
PCDHGB1-201ENST00000523390 ELOF1P60002 83 aaKnown RBP8.72□□□□□ -1.01
PCDHGB1-201ENST00000523390 PRR4Q16378 134 aa8.72□□□□□ -1.01
PCDHGB1-201ENST00000523390 FAM168BA1KXE4 195 aa8.71□□□□□ -1.02
PCDHGB1-201ENST00000523390 Q8N9L7 120 aa8.71□□□□□ -1.02
PCDHGB1-201ENST00000523390 TM2D3Q9BRN9 247 aa8.7□□□□□ -1.02
PCDHGB1-201ENST00000523390 CSMD1Q96PZ7 3565 aa8.7□□□□□ -1.02
PCDHGB1-201ENST00000523390 LINC01547P58512 204 aaPredicted RBP8.69□□□□□ -1.02
PCDHGB1-201ENST00000523390 C15orf56Q8N910 161 aa8.69□□□□□ -1.02
PCDHGB1-201ENST00000523390 RELNP78509 3460 aa8.69□□□□□ -1.02
PCDHGB1-201ENST00000523390 C16orf90A8MZG2 172 aa8.69□□□□□ -1.02
PCDHGB1-201ENST00000523390 Q6ZRX8 168 aa8.69□□□□□ -1.02
PCDHGB1-201ENST00000523390 SERTAD4-AS1Q5TG53 156 aa8.68□□□□□ -1.02
PCDHGB1-201ENST00000523390 ST20-AS1Q8NBB2 130 aa8.68□□□□□ -1.02
PCDHGB1-201ENST00000523390 RTL8CO15255 209 aa8.68□□□□□ -1.02
PCDHGB1-201ENST00000523390 APCP25054 2843 aa8.67□□□□□ -1.02
PCDHGB1-201ENST00000523390 IGHV6-1A0A0B4J1U7 121 aa8.67□□□□□ -1.02
PCDHGB1-201ENST00000523390 IGLV6-57P01721 117 aa8.67□□□□□ -1.02
PCDHGB1-201ENST00000523390 HIVEP1P15822 2718 aa8.67□□□□□ -1.02
PCDHGB1-201ENST00000523390 TRBV7-6A0A0J9YX20 115 aa8.66□□□□□ -1.02
PCDHGB1-201ENST00000523390 TRAV7A0A075B6U4 112 aa8.66□□□□□ -1.02
PCDHGB1-201ENST00000523390 WWC2-AS2Q96NR7 200 aa8.65□□□□□ -1.02
PCDHGB1-201ENST00000523390 EPM2AB3EWF7 344 aa8.64□□□□□ -1.03
PCDHGB1-201ENST00000523390 CASC10Q5T4H9 136 aa8.63□□□□□ -1.03
PCDHGB1-201ENST00000523390 LINC00208Q96KT6 92 aa8.63□□□□□ -1.03
PCDHGB1-201ENST00000523390 FAM104AQ969W3 186 aa8.63□□□□□ -1.03
PCDHGB1-201ENST00000523390 CASC2Q6XLA1 102 aa8.62□□□□□ -1.03
PCDHGB1-201ENST00000523390 MPLKIPQ8TAP9 179 aa8.62□□□□□ -1.03
PCDHGB1-201ENST00000523390 MOBPQ13875 183 aa8.62□□□□□ -1.03
PCDHGB1-201ENST00000523390 NDUFC1O43677 76 aa8.61□□□□□ -1.03
PCDHGB1-201ENST00000523390 Q6ZQT0 140 aa8.61□□□□□ -1.03
PCDHGB1-201ENST00000523390 HRNRQ86YZ3 2850 aaPredicted RBP8.61□□□□□ -1.03
PCDHGB1-201ENST00000523390 LINC00476Q8WZB0 136 aa8.61□□□□□ -1.03
PCDHGB1-201ENST00000523390 DCHS2Q6V1P9 2916 aa8.61□□□□□ -1.03
PCDHGB1-201ENST00000523390 C9orf129Q5T035 196 aaKnown RBP8.6□□□□□ -1.03
PCDHGB1-201ENST00000523390 Q8NBF4 154 aa8.59□□□□□ -1.03
PCDHGB1-201ENST00000523390 CELSR2Q9HCU4 2923 aa8.58□□□□□ -1.04
PCDHGB1-201ENST00000523390 WIPF1O43516 503 aa8.58□□□□□ -1.04
PCDHGB1-201ENST00000523390 CXCL6P80162 114 aa8.58□□□□□ -1.04
PCDHGB1-201ENST00000523390 SPENQ96T58 3664 aaKnown RBP8.58□□□□□ -1.04
PCDHGB1-201ENST00000523390 LINC00528Q8N1L1 170 aa8.58□□□□□ -1.04
PCDHGB1-201ENST00000523390 IGLV1-50A0A075B6I6 118 aa8.57□□□□□ -1.04
PCDHGB1-201ENST00000523390 KCNQ1DNQ9H478 68 aa8.57□□□□□ -1.04
PCDHGB1-201ENST00000523390 CRYGAP11844 174 aa8.56□□□□□ -1.04
PCDHGB1-201ENST00000523390 HCG22E2RYF7 251 aa8.56□□□□□ -1.04
PCDHGB1-201ENST00000523390 LOC110117498A0A087WWA1 95 aa8.55□□□□□ -1.04
PCDHGB1-201ENST00000523390 RETNLBQ9BQ08 111 aa8.55□□□□□ -1.04
PCDHGB1-201ENST00000523390 CRYBG3Q68DQ2 2970 aa8.55□□□□□ -1.04
PCDHGB1-201ENST00000523390 APLNQ9ULZ1 77 aa8.55□□□□□ -1.04
PCDHGB1-201ENST00000523390 BCE1O60756 84 aa8.55□□□□□ -1.04
PCDHGB1-201ENST00000523390 SVEP1Q4LDE5 3571 aa8.54□□□□□ -1.04
PCDHGB1-201ENST00000523390 NF1P21359 2839 aa8.54□□□□□ -1.04
PCDHGB1-201ENST00000523390 TMEM254Q8TBM7 123 aa8.53□□□□□ -1.04
PCDHGB1-201ENST00000523390 SMIM29Q86T20 159 aa8.53□□□□□ -1.04
PCDHGB1-201ENST00000523390 C9orf163Q8N9P6 203 aa8.52□□□□□ -1.05
PCDHGB1-201ENST00000523390 PCOTHQ58A44 107 aa8.52□□□□□ -1.05
PCDHGB1-201ENST00000523390 A0A087WTM6 91 aa8.52□□□□□ -1.05
PCDHGB1-201ENST00000523390 BRK1Q8WUW1 75 aa8.52□□□□□ -1.05
PCDHGB1-201ENST00000523390 ATP5EP56381 51 aaPredicted RBP8.51□□□□□ -1.05
PCDHGB1-201ENST00000523390 SPACA4Q8TDM5 124 aa8.51□□□□□ -1.05
PCDHGB1-201ENST00000523390 NIPBLQ6KC79 2804 aaeCLIP8.51□□□□□ -1.05
PCDHGB1-201ENST00000523390 H0Y9P7 68 aa8.5□□□□□ -1.05
PCDHGB1-201ENST00000523390 C4orf26Q17RF5 130 aa8.5□□□□□ -1.05
PCDHGB1-201ENST00000523390 STAB2Q8WWQ8 2551 aa8.49□□□□□ -1.05
PCDHGB1-201ENST00000523390 TLX1NBP0CAT3 122 aa8.49□□□□□ -1.05
PCDHGB1-201ENST00000523390 A0A0U1RQV1 116 aa8.48□□□□□ -1.05
PCDHGB1-201ENST00000523390 A0A1W2PNN7 141 aa8.48□□□□□ -1.05
PCDHGB1-201ENST00000523390 KMT2BQ9UMN6 2715 aaPredicted RBP8.48□□□□□ -1.05
PCDHGB1-201ENST00000523390 SEC61GP60059 68 aa8.48□□□□□ -1.05
PCDHGB1-201ENST00000523390 LINC01600Q96MT4 127 aa8.47□□□□□ -1.05
PCDHGB1-201ENST00000523390 Q8N377 158 aa8.47□□□□□ -1.05
PCDHGB1-201ENST00000523390 LIMD2Q9BT23 127 aa8.47□□□□□ -1.05
PCDHGB1-201ENST00000523390 A0A0G2JQZ4 141 aa8.46□□□□□ -1.05
PCDHGB1-201ENST00000523390 RPL37AP61513 92 aaKnown RBP8.46□□□□□ -1.05
PCDHGB1-201ENST00000523390 A0A1B0GW54 56 aa8.46□□□□□ -1.06
PCDHGB1-201ENST00000523390 FBN2P35556 2912 aa8.46□□□□□ -1.06
PCDHGB1-201ENST00000523390 CELSR1Q9NYQ6 3014 aa8.45□□□□□ -1.06
PCDHGB1-201ENST00000523390 ERC2-IT1O76042 136 aa8.43□□□□□ -1.06
PCDHGB1-201ENST00000523390 TRBV7-4A0A0J9YYF1 115 aa8.43□□□□□ -1.06
PCDHGB1-201ENST00000523390 PLA2G2DQ9UNK4 145 aa8.43□□□□□ -1.06
PCDHGB1-201ENST00000523390 hDV103S1A0JD37 113 aa8.42□□□□□ -1.06
PCDHGB1-201ENST00000523390 CNBPP62633 177 aaKnown RBP8.42□□□□□ -1.06
PCDHGB1-201ENST00000523390 IGFL1Q6UW32 110 aa8.41□□□□□ -1.06
PCDHGB1-201ENST00000523390 SERP1Q9Y6X1 66 aa8.41□□□□□ -1.06
PCDHGB1-201ENST00000523390 C1orf64Q8NEQ6 169 aa8.41□□□□□ -1.06
PCDHGB1-201ENST00000523390 TYMSOSQ8TAI1 123 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms