RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 KALRNO60229 2985 aa2.23□□□□□ -2.05
SKP1-211ENST00000523359 NCOR1O75376 2440 aa2.22□□□□□ -2.05
SKP1-211ENST00000523359 PTPRZ1P23471 2315 aaPredicted RBP2.22□□□□□ -2.05
SKP1-211ENST00000523359 SPINT3P49223 89 aa2.22□□□□□ -2.05
SKP1-211ENST00000523359 Q96NJ1 140 aa2.22□□□□□ -2.05
SKP1-211ENST00000523359 TIMM8BQ9Y5J9 83 aaPredicted RBP2.22□□□□□ -2.05
SKP1-211ENST00000523359 NCOA6Q14686 2063 aaPredicted RBP2.22□□□□□ -2.05
SKP1-211ENST00000523359 SDK1Q7Z5N4 2213 aa2.22□□□□□ -2.05
SKP1-211ENST00000523359 MYO9AB2RTY4 2548 aa2.21□□□□□ -2.06
SKP1-211ENST00000523359 A0A087WVE0 104 aa2.21□□□□□ -2.06
SKP1-211ENST00000523359 MGPP08493 103 aa2.21□□□□□ -2.06
SKP1-211ENST00000523359 UBR4Q5T4S7 5183 aa2.21□□□□□ -2.06
SKP1-211ENST00000523359 PLXNB2O15031 1838 aa2.2□□□□□ -2.06
SKP1-211ENST00000523359 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.2□□□□□ -2.06
SKP1-211ENST00000523359 COA5Q86WW8 74 aa2.2□□□□□ -2.06
SKP1-211ENST00000523359 OBSCN-AS1Q96MR7 158 aa2.2□□□□□ -2.06
SKP1-211ENST00000523359 UBL5Q9BZL1 73 aa2.2□□□□□ -2.06
SKP1-211ENST00000523359 LINC00472Q9H8W2 130 aa2.2□□□□□ -2.06
SKP1-211ENST00000523359 HTTP42858 3142 aa2.2□□□□□ -2.06
SKP1-211ENST00000523359 DCHS1Q96JQ0 3298 aa2.2□□□□□ -2.06
SKP1-211ENST00000523359 C2CD3Q4AC94 2353 aa2.2□□□□□ -2.06
SKP1-211ENST00000523359 M0R3E3 92 aa2.19□□□□□ -2.06
SKP1-211ENST00000523359 NDUFA3O95167 84 aa2.19□□□□□ -2.06
SKP1-211ENST00000523359 SPATA8Q6RVD6 105 aa2.19□□□□□ -2.06
SKP1-211ENST00000523359 LINC00208Q96KT6 92 aa2.19□□□□□ -2.06
SKP1-211ENST00000523359 CNFNQ9BYD5 112 aa2.19□□□□□ -2.06
SKP1-211ENST00000523359 SNURFQ9Y675 71 aa2.19□□□□□ -2.06
SKP1-211ENST00000523359 MED13LQ71F56 2210 aa2.19□□□□□ -2.06
SKP1-211ENST00000523359 WDFY4Q6ZS81 3184 aa2.19□□□□□ -2.06
SKP1-211ENST00000523359 C5orf42Q9H799 3197 aa2.19□□□□□ -2.06
SKP1-211ENST00000523359 NCOR2Q9Y618 2525 aa2.19□□□□□ -2.06
SKP1-211ENST00000523359 INTS1Q8N201 2190 aaKnown RBP2.18□□□□□ -2.06
SKP1-211ENST00000523359 ICE1Q9Y2F5 2266 aa2.18□□□□□ -2.06
SKP1-211ENST00000523359 IGIPA6NJ69 53 aa2.18□□□□□ -2.06
SKP1-211ENST00000523359 H3BSH0 61 aa2.18□□□□□ -2.06
SKP1-211ENST00000523359 KRTAP6-3Q3LI67 103 aa2.18□□□□□ -2.06
SKP1-211ENST00000523359 FDCSPQ8NFU4 85 aa2.18□□□□□ -2.06
SKP1-211ENST00000523359 SPTBN2O15020 2390 aa2.17□□□□□ -2.06
SKP1-211ENST00000523359 ACACBO00763 2458 aa2.17□□□□□ -2.06
SKP1-211ENST00000523359 FAM208BQ5VWN6 2430 aa2.17□□□□□ -2.06
SKP1-211ENST00000523359 LCE6AA0A183 80 aa2.17□□□□□ -2.06
SKP1-211ENST00000523359 H0YGX0 51 aa2.17□□□□□ -2.06
SKP1-211ENST00000523359 I3L3M4 83 aa2.17□□□□□ -2.06
SKP1-211ENST00000523359 NDUFB1O75438 58 aa2.17□□□□□ -2.06
SKP1-211ENST00000523359 ZCCHC13Q8WW36 166 aaKnown RBP2.17□□□□□ -2.06
SKP1-211ENST00000523359 NOTCH1P46531 2555 aa2.17□□□□□ -2.06
SKP1-211ENST00000523359 BPTFQ12830 3046 aa2.17□□□□□ -2.06
SKP1-211ENST00000523359 HELZ2Q9BYK8 2649 aaKnown RBP2.17□□□□□ -2.06
SKP1-211ENST00000523359 CDH23Q9H251 3354 aa2.16□□□□□ -2.06
SKP1-211ENST00000523359 RPS27P42677 84 aaKnown RBP2.16□□□□□ -2.06
SKP1-211ENST00000523359 KRTAP12-3P60328 96 aa2.16□□□□□ -2.06
SKP1-211ENST00000523359 COX17Q14061 63 aa2.16□□□□□ -2.06
SKP1-211ENST00000523359 C10orf113Q5VZT2 155 aa2.16□□□□□ -2.06
SKP1-211ENST00000523359 USP34Q70CQ2 3546 aa2.16□□□□□ -2.06
SKP1-211ENST00000523359 CACNA1CQ13936 2221 aa2.15□□□□□ -2.06
SKP1-211ENST00000523359 REV3LO60673 3130 aa2.15□□□□□ -2.06
SKP1-211ENST00000523359 DNAH12Q6ZR08 3092 aa2.15□□□□□ -2.06
SKP1-211ENST00000523359 H0Y9P7 68 aa2.15□□□□□ -2.07
SKP1-211ENST00000523359 M0R1W7 72 aa2.15□□□□□ -2.07
SKP1-211ENST00000523359 SPINK7P58062 85 aa2.15□□□□□ -2.07
SKP1-211ENST00000523359 SMIM2Q9BVW6 85 aa2.15□□□□□ -2.07
SKP1-211ENST00000523359 LRRK2Q5S007 2527 aa2.15□□□□□ -2.07
SKP1-211ENST00000523359 CEP250Q9BV73 2442 aa2.15□□□□□ -2.07
SKP1-211ENST00000523359 FAM186AA6NE01 2351 aa2.14□□□□□ -2.07
SKP1-211ENST00000523359 TRGV1A0A0A0MS02 117 aa2.14□□□□□ -2.07
SKP1-211ENST00000523359 C10orf99Q6UWK7 81 aa2.14□□□□□ -2.07
SKP1-211ENST00000523359 ENHOQ6UWT2 76 aa2.14□□□□□ -2.07
SKP1-211ENST00000523359 PCLOQ9Y6V0 5065 aa2.14□□□□□ -2.07
SKP1-211ENST00000523359 TRGV2A0A075B6R0 118 aa2.13□□□□□ -2.07
SKP1-211ENST00000523359 NREPQ16612 68 aa2.13□□□□□ -2.07
SKP1-211ENST00000523359 PIGYQ3MUY2 71 aa2.13□□□□□ -2.07
SKP1-211ENST00000523359 ZFYVE26Q68DK2 2539 aa2.13□□□□□ -2.07
SKP1-211ENST00000523359 RIF1Q5UIP0 2472 aaKnown RBP2.12□□□□□ -2.07
SKP1-211ENST00000523359 ANKHD1Q8IWZ3 2542 aaKnown RBP2.12□□□□□ -2.07
SKP1-211ENST00000523359 PRCDQ00LT1 54 aa2.12□□□□□ -2.07
SKP1-211ENST00000523359 DEFB114Q30KQ6 69 aa2.12□□□□□ -2.07
SKP1-211ENST00000523359 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
SKP1-211ENST00000523359 COL6A5A8TX70 2615 aa2.12□□□□□ -2.07
SKP1-211ENST00000523359 CCDC168Q8NDH2 2452 aa2.12□□□□□ -2.07
SKP1-211ENST00000523359 SPG11Q96JI7 2443 aa2.11□□□□□ -2.07
SKP1-211ENST00000523359 CELSR3Q9NYQ7 3312 aa2.11□□□□□ -2.07
SKP1-211ENST00000523359 XIRP2A4UGR9 3374 aa2.11□□□□□ -2.07
SKP1-211ENST00000523359 A0A096LNT2 108 aa2.1□□□□□ -2.07
SKP1-211ENST00000523359 TRAV21A0A0B4J279 112 aa2.1□□□□□ -2.07
SKP1-211ENST00000523359 Q6ZQY7 126 aa2.1□□□□□ -2.07
SKP1-211ENST00000523359 CCL19Q99731 98 aa2.1□□□□□ -2.07
SKP1-211ENST00000523359 CNOT1A5YKK6 2376 aaKnown RBP2.1□□□□□ -2.07
SKP1-211ENST00000523359 SPTAN1Q13813 2472 aaKnown RBP2.1□□□□□ -2.07
SKP1-211ENST00000523359 ABCA1O95477 2261 aa2.1□□□□□ -2.07
SKP1-211ENST00000523359 CFAP46Q8IYW2 2715 aa2.09□□□□□ -2.07
SKP1-211ENST00000523359 PRB1P04280 392 aa2.09□□□□□ -2.07
SKP1-211ENST00000523359 CRIP1P50238 77 aa2.09□□□□□ -2.07
SKP1-211ENST00000523359 POLQO75417 2590 aa2.09□□□□□ -2.07
SKP1-211ENST00000523359 F5P12259 2224 aa2.09□□□□□ -2.08
SKP1-211ENST00000523359 NBEAL2Q6ZNJ1 2754 aa2.08□□□□□ -2.08
SKP1-211ENST00000523359 TECTAO75443 2155 aa2.08□□□□□ -2.08
SKP1-211ENST00000523359 VWFP04275 2813 aa2.08□□□□□ -2.08
SKP1-211ENST00000523359 DNHD1Q96M86 4753 aa2.08□□□□□ -2.08
SKP1-211ENST00000523359 NDUFA1O15239 70 aa2.08□□□□□ -2.08
SKP1-211ENST00000523359 ACYP2P14621 99 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms