RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 TIMM8BQ9Y5J9 83 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 DNAH10Q8IVF4 4471 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 PLECQ15149 4684 aaKnown RBP1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 STARD9Q9P2P6 4700 aa1.29□□□□□ -2.2
HMGB1P1-201ENST00000522557 TRBV20-1A0A075B6N2 111 aa1.29□□□□□ -2.2
HMGB1P1-201ENST00000522557 SNRPGP15A8MWD9 76 aa1.29□□□□□ -2.2
HMGB1P1-201ENST00000522557 PPYP01298 95 aa1.29□□□□□ -2.2
HMGB1P1-201ENST00000522557 PRB4P10163 310 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P1-201ENST00000522557 HAMPP81172 84 aa1.29□□□□□ -2.2
HMGB1P1-201ENST00000522557 PRCDQ00LT1 54 aa1.29□□□□□ -2.2
HMGB1P1-201ENST00000522557 INSL4Q14641 139 aa1.29□□□□□ -2.2
HMGB1P1-201ENST00000522557 MEIG1Q5JSS6 88 aa1.29□□□□□ -2.2
HMGB1P1-201ENST00000522557 DPH3Q96FX2 82 aa1.29□□□□□ -2.2
HMGB1P1-201ENST00000522557 SCN3BQ9NY72 215 aa1.29□□□□□ -2.2
HMGB1P1-201ENST00000522557 KMT2AQ03164 3969 aa1.29□□□□□ -2.2
HMGB1P1-201ENST00000522557 ABCA13Q86UQ4 5058 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 TRAV1-2A0A0B4J238 106 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 C20orf202A1L168 122 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 CRYM-AS1A6NIL9 109 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 IFITM5A6NNB3 132 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 H3BNG1 76 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 FGF7P21781 194 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 ASIPP42127 132 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 DEFB1P60022 68 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 TDRG1Q3Y452 100 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 SPINK9Q5DT21 86 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 GDF5OSQ5U4N7 250 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 ZNF818PQ6ZRF7 136 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 Q6ZUT4 128 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 SNX29P2Q8IUI4 249 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 C8orf59Q8N0T1 100 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 FAM19A2Q8N3H0 131 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 Q8TAT8 98 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 ZNF431Q8TF32 576 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 COPS9Q8WXC6 57 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 CACFD1Q9UGQ2 172 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 DNAH11Q96DT5 4516 aa1.28□□□□□ -2.2
HMGB1P1-201ENST00000522557 TRAV12-2A0A075B6T6 113 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 A0A096LPF7 62 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 SMIM31A0A1B0GVY4 71 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 CEBPZOSA8MTT3 80 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 CFDP00746 253 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 IGLC1P0CG04 106 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 SMIM6P0DI80 62 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 SPINK13Q1W4C9 94 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 MIC13Q5XKP0 118 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 TEX261Q6UWH6 196 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 LYPD5Q6UWN5 251 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 S100A16Q96FQ6 103 aaKnown RBP1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 C14orf144Q96I85 54 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 LYSTQ99698 3801 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 PRO0255Q9UI72 69 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 SNURFQ9Y675 71 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 CSMD3Q7Z407 3707 aa1.27□□□□□ -2.21
HMGB1P1-201ENST00000522557 HECTD4Q9Y4D8 3996 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 TRGV1A0A0A0MS02 117 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 F8W1H4 67 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 CCDC179H3BU77 68 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 M0R2P5 195 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 PITX3O75364 302 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 GNG4P50150 75 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 RPL37AP61513 92 aaKnown RBP1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 MIR22HGQ0VDD5 57 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 ASB16-AS1Q495Z4 193 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 LINC01545Q5VT33 79 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 LINC00269Q8N2A0 174 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 C5orf17Q8NAS9 161 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 ATP6V0E2Q8NHE4 81 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 TMEM263Q8WUH6 116 aaKnown RBP1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 LINC00526Q96FQ7 95 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 SEC11CQ9BY50 192 aa1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 MRPL36Q9P0J6 103 aaKnown RBP1.26□□□□□ -2.21
HMGB1P1-201ENST00000522557 FRAS1Q86XX4 4008 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 DYNC1H1Q14204 4646 aaKnown RBP1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 UBR4Q5T4S7 5183 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 DNAH6Q9C0G6 4158 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 DNAH17Q9UFH2 4485 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 TRAV12-3A0A0B4J271 114 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 A6NN06 94 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 A8MTW9 85 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 IGHV3-30P01768 117 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 IGHV3-33P01772 117 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 IL5P05113 134 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 IGHV3-30-5P0DP03 117 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 ADCYAP1P18509 176 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 FAM74A1Q5RGS3 127 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 ATP11AUNQ6ZP68 121 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 GTF2H5Q6ZYL4 71 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 OBSCN-AS1Q96MR7 158 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 TRGV9Q99603 122 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 NAA60Q9H7X0 242 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 ZFP30Q9Y2G7 519 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 HERC1Q15751 4861 aa1.25□□□□□ -2.21
HMGB1P1-201ENST00000522557 VPS13DQ5THJ4 4388 aa1.24□□□□□ -2.21
HMGB1P1-201ENST00000522557 HSPG2P98160 4391 aa1.24□□□□□ -2.21
HMGB1P1-201ENST00000522557 PIGBOS1A0A0B4J2F0 54 aa1.24□□□□□ -2.21
HMGB1P1-201ENST00000522557 H3BRM9 83 aa1.24□□□□□ -2.21
HMGB1P1-201ENST00000522557 SPINK4O60575 86 aa1.24□□□□□ -2.21
HMGB1P1-201ENST00000522557 SNCGO76070 127 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms