RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 TMEM223A0PJW6 202 aa6.04□□□□□ -1.44
CSMD1-210ENST00000521646 FABP9Q0Z7S8 132 aa6.04□□□□□ -1.44
CSMD1-210ENST00000521646 TMEM170BQ5T4T1 132 aa6.04□□□□□ -1.44
CSMD1-210ENST00000521646 BAGE3Q86Y29 109 aa6.04□□□□□ -1.44
CSMD1-210ENST00000521646 LINC01549A6NIU2 74 aa6.03□□□□□ -1.44
CSMD1-210ENST00000521646 TSPEAR-AS2P59090 65 aa6.03□□□□□ -1.44
CSMD1-210ENST00000521646 BOD1L2Q8IYS8 172 aa6.03□□□□□ -1.44
CSMD1-210ENST00000521646 MIR7-3HGQ8N6C7 128 aa6.03□□□□□ -1.44
CSMD1-210ENST00000521646 SMCO4Q9NRQ5 59 aa6.03□□□□□ -1.44
CSMD1-210ENST00000521646 HBDP02042 147 aa6.02□□□□□ -1.45
CSMD1-210ENST00000521646 KRTAP10-6P60371 365 aaPredicted RBP6.02□□□□□ -1.45
CSMD1-210ENST00000521646 ZNF706Q9Y5V0 76 aaPredicted RBP6.02□□□□□ -1.45
CSMD1-210ENST00000521646 LINC00614P0C842 121 aa6.01□□□□□ -1.45
CSMD1-210ENST00000521646 TRAPPC1Q9Y5R8 145 aa6.01□□□□□ -1.45
CSMD1-210ENST00000521646 RPS29P62273 56 aaKnown RBP6□□□□□ -1.45
CSMD1-210ENST00000521646 PCOTHQ58A44 107 aa6□□□□□ -1.45
CSMD1-210ENST00000521646 CHTOPQ9Y3Y2 248 aaKnown RBP6□□□□□ -1.45
CSMD1-210ENST00000521646 ETDCA0A1B0GVM5 59 aa5.99□□□□□ -1.45
CSMD1-210ENST00000521646 ST20-AS1Q8NBB2 130 aa5.99□□□□□ -1.45
CSMD1-210ENST00000521646 SSPOA2VEC9 5147 aa5.98□□□□□ -1.45
CSMD1-210ENST00000521646 SLC25A20O43772 301 aa5.97□□□□□ -1.45
CSMD1-210ENST00000521646 Q6ZRX8 168 aa5.97□□□□□ -1.45
CSMD1-210ENST00000521646 SSBP3-AS1Q7Z2R9 100 aa5.97□□□□□ -1.45
CSMD1-210ENST00000521646 COLCA2A8K830 154 aa5.96□□□□□ -1.46
CSMD1-210ENST00000521646 SFTA2Q6UW10 78 aa5.96□□□□□ -1.46
CSMD1-210ENST00000521646 SOSTDC1Q6X4U4 206 aa5.96□□□□□ -1.46
CSMD1-210ENST00000521646 USH2AO75445 5202 aa5.96□□□□□ -1.46
CSMD1-210ENST00000521646 IGLV8-61A0A075B6I0 122 aa5.95□□□□□ -1.46
CSMD1-210ENST00000521646 LOC107984156A0A0G2JMH3 177 aa5.95□□□□□ -1.46
CSMD1-210ENST00000521646 C9orf92A6NGG3 77 aa5.95□□□□□ -1.46
CSMD1-210ENST00000521646 MEIG1Q5JSS6 88 aa5.95□□□□□ -1.46
CSMD1-210ENST00000521646 ARL17AQ8IVW1 177 aa5.95□□□□□ -1.46
CSMD1-210ENST00000521646 KRTAP2-2Q9BYT5 123 aa5.95□□□□□ -1.46
CSMD1-210ENST00000521646 NDUFA12Q9UI09 145 aa5.95□□□□□ -1.46
CSMD1-210ENST00000521646 TRAV12-1A0A0B4J245 112 aa5.94□□□□□ -1.46
CSMD1-210ENST00000521646 S100A1P23297 94 aa5.94□□□□□ -1.46
CSMD1-210ENST00000521646 DDTP30046 118 aa5.94□□□□□ -1.46
CSMD1-210ENST00000521646 IGLV6-57P01721 117 aa5.93□□□□□ -1.46
CSMD1-210ENST00000521646 FAM19A2Q8N3H0 131 aa5.93□□□□□ -1.46
CSMD1-210ENST00000521646 IFI27L1Q96BM0 104 aa5.93□□□□□ -1.46
CSMD1-210ENST00000521646 C9orf153Q5TBE3 101 aa5.92□□□□□ -1.46
CSMD1-210ENST00000521646 HRCT1Q6UXD1 115 aa5.92□□□□□ -1.46
CSMD1-210ENST00000521646 CHCHD1Q96BP2 118 aaKnown RBP5.92□□□□□ -1.46
CSMD1-210ENST00000521646 TRGC2P03986 189 aa5.91□□□□□ -1.46
CSMD1-210ENST00000521646 ADAMTSL4-AS1Q5T5F5 129 aa5.91□□□□□ -1.46
CSMD1-210ENST00000521646 TRBV10-2A0A0K0K1G8 114 aa5.9□□□□□ -1.46
CSMD1-210ENST00000521646 HERV-K104P63124 156 aa5.9□□□□□ -1.46
CSMD1-210ENST00000521646 A0A0G2JQZ4 141 aa5.89□□□□□ -1.47
CSMD1-210ENST00000521646 CFC1BP0CG36 223 aa5.89□□□□□ -1.47
CSMD1-210ENST00000521646 NPC2P61916 151 aa5.89□□□□□ -1.47
CSMD1-210ENST00000521646 TRAV23DV6A0A075B6W5 121 aa5.88□□□□□ -1.47
CSMD1-210ENST00000521646 MYMXA0A1B0GTQ4 84 aa5.88□□□□□ -1.47
CSMD1-210ENST00000521646 PMCHL2Q9BQD1 86 aa5.88□□□□□ -1.47
CSMD1-210ENST00000521646 SPANXB1Q9NS25 103 aaPredicted RBP5.88□□□□□ -1.47
CSMD1-210ENST00000521646 H0Y8G0 127 aa5.87□□□□□ -1.47
CSMD1-210ENST00000521646 LEPROTO15243 131 aa5.87□□□□□ -1.47
CSMD1-210ENST00000521646 ZNF73O43830 326 aaPredicted RBP5.87□□□□□ -1.47
CSMD1-210ENST00000521646 SPRR1BP22528 89 aa5.87□□□□□ -1.47
CSMD1-210ENST00000521646 HSBP1O75506 76 aa5.86□□□□□ -1.47
CSMD1-210ENST00000521646 J3QQQ9 107 aa5.85□□□□□ -1.47
CSMD1-210ENST00000521646 NDUFC2O95298 119 aa5.85□□□□□ -1.47
CSMD1-210ENST00000521646 LITAFQ99732 161 aa5.85□□□□□ -1.47
CSMD1-210ENST00000521646 H7C2G1 150 aa5.84□□□□□ -1.47
CSMD1-210ENST00000521646 HIST1H2BKO60814 126 aa5.84□□□□□ -1.47
CSMD1-210ENST00000521646 SERF1AO75920 110 aa5.84□□□□□ -1.47
CSMD1-210ENST00000521646 HIST1H2BJP06899 126 aa5.84□□□□□ -1.47
CSMD1-210ENST00000521646 HIST1H2BOP23527 126 aa5.84□□□□□ -1.47
CSMD1-210ENST00000521646 HIST1H2BBP33778 126 aa5.84□□□□□ -1.47
CSMD1-210ENST00000521646 HIST1H2BDP58876 126 aa5.84□□□□□ -1.47
CSMD1-210ENST00000521646 HIST1H2BCP62807 126 aa5.84□□□□□ -1.47
CSMD1-210ENST00000521646 HIST2H2BEQ16778 126 aa5.84□□□□□ -1.47
CSMD1-210ENST00000521646 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.84□□□□□ -1.47
CSMD1-210ENST00000521646 HIST1H2BHQ93079 126 aa5.84□□□□□ -1.47
CSMD1-210ENST00000521646 HIST1H2BNQ99877 126 aa5.84□□□□□ -1.47
CSMD1-210ENST00000521646 HIST1H2BMQ99879 126 aa5.84□□□□□ -1.47
CSMD1-210ENST00000521646 A0A0J9YXY3 114 aa5.83□□□□□ -1.48
CSMD1-210ENST00000521646 COA6Q5JTJ3 125 aaKnown RBP5.83□□□□□ -1.48
CSMD1-210ENST00000521646 S100A7L2Q5SY68 101 aa5.83□□□□□ -1.48
CSMD1-210ENST00000521646 SMIM29Q86T20 159 aa5.83□□□□□ -1.48
CSMD1-210ENST00000521646 MAP1LC3CQ9BXW4 147 aa5.83□□□□□ -1.48
CSMD1-210ENST00000521646 FCGBPQ9Y6R7 5405 aaPredicted RBP5.82□□□□□ -1.48
CSMD1-210ENST00000521646 LEPROTL1O95214 131 aa5.82□□□□□ -1.48
CSMD1-210ENST00000521646 C1orf195Q5TG92 126 aa5.82□□□□□ -1.48
CSMD1-210ENST00000521646 LINC00587B1AMM8 73 aa5.81□□□□□ -1.48
CSMD1-210ENST00000521646 M0R2T5 61 aa5.81□□□□□ -1.48
CSMD1-210ENST00000521646 RPL37P61927 97 aaKnown RBP5.81□□□□□ -1.48
CSMD1-210ENST00000521646 Q1RN00 199 aa5.81□□□□□ -1.48
CSMD1-210ENST00000521646 HSPB8Q9UJY1 196 aa5.81□□□□□ -1.48
CSMD1-210ENST00000521646 LOC105371267A0A1B0GV96 52 aa5.8□□□□□ -1.48
CSMD1-210ENST00000521646 S100A6P06703 90 aa5.8□□□□□ -1.48
CSMD1-210ENST00000521646 KRTAP10-7P60409 375 aaPredicted RBP5.8□□□□□ -1.48
CSMD1-210ENST00000521646 JOSD1Q15040 202 aaPredicted RBP5.8□□□□□ -1.48
CSMD1-210ENST00000521646 S100A12P80511 92 aa5.79□□□□□ -1.48
CSMD1-210ENST00000521646 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
CSMD1-210ENST00000521646 LIMD2Q9BT23 127 aa5.79□□□□□ -1.48
CSMD1-210ENST00000521646 TTTY13Q9BZ97 58 aa5.78□□□□□ -1.48
CSMD1-210ENST00000521646 C5orf52A6NGY3 159 aa5.77□□□□□ -1.49
CSMD1-210ENST00000521646 DPM2O94777 84 aa5.77□□□□□ -1.49
CSMD1-210ENST00000521646 FABP4P15090 132 aa5.77□□□□□ -1.49
CSMD1-210ENST00000521646 LGALS3P17931 250 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms