RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 SPRR4Q96PI1 79 aa3.59□□□□□ -1.83
NUDCD1-204ENST00000521439 KCNQ1DNQ9H478 68 aa3.59□□□□□ -1.83
NUDCD1-204ENST00000521439 CUL9Q8IWT3 2517 aa3.59□□□□□ -1.84
NUDCD1-204ENST00000521439 CR1P17927 2039 aa3.58□□□□□ -1.84
NUDCD1-204ENST00000521439 WNK2Q9Y3S1 2297 aa3.58□□□□□ -1.84
NUDCD1-204ENST00000521439 COX6A2Q02221 97 aa3.58□□□□□ -1.84
NUDCD1-204ENST00000521439 ST20-AS1Q8NBB2 130 aa3.58□□□□□ -1.84
NUDCD1-204ENST00000521439 ABCA4P78363 2273 aa3.58□□□□□ -1.84
NUDCD1-204ENST00000521439 C5orf42Q9H799 3197 aa3.57□□□□□ -1.84
NUDCD1-204ENST00000521439 XIRP2A4UGR9 3374 aa3.57□□□□□ -1.84
NUDCD1-204ENST00000521439 COX17Q14061 63 aa3.57□□□□□ -1.84
NUDCD1-204ENST00000521439 C5orf56Q8N8D9 126 aa3.57□□□□□ -1.84
NUDCD1-204ENST00000521439 AHCTF1Q8WYP5 2266 aa3.57□□□□□ -1.84
NUDCD1-204ENST00000521439 USP34Q70CQ2 3546 aa3.57□□□□□ -1.84
NUDCD1-204ENST00000521439 IGLV7-43P04211 117 aa3.56□□□□□ -1.84
NUDCD1-204ENST00000521439 Q6ZTI0 123 aa3.56□□□□□ -1.84
NUDCD1-204ENST00000521439 RHPN1-AS1Q9BWJ2 59 aa3.56□□□□□ -1.84
NUDCD1-204ENST00000521439 GPR179Q6PRD1 2367 aa3.55□□□□□ -1.84
NUDCD1-204ENST00000521439 ICE1Q9Y2F5 2266 aa3.55□□□□□ -1.84
NUDCD1-204ENST00000521439 C9orf163Q8N9P6 203 aa3.55□□□□□ -1.84
NUDCD1-204ENST00000521439 CACNA1BQ00975 2339 aa3.54□□□□□ -1.84
NUDCD1-204ENST00000521439 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.54□□□□□ -1.84
NUDCD1-204ENST00000521439 A0A096LNT2 108 aa3.54□□□□□ -1.84
NUDCD1-204ENST00000521439 KRTAP10-1P60331 282 aa3.54□□□□□ -1.84
NUDCD1-204ENST00000521439 LINC00575Q6W349 94 aa3.54□□□□□ -1.84
NUDCD1-204ENST00000521439 IGKV3OR2-268A0A0C4DH90 116 aa3.53□□□□□ -1.84
NUDCD1-204ENST00000521439 LINC00959A0A1B0GUT2 108 aa3.53□□□□□ -1.84
NUDCD1-204ENST00000521439 G3V318 75 aa3.53□□□□□ -1.84
NUDCD1-204ENST00000521439 KRTAP10-10P60014 251 aa3.53□□□□□ -1.84
NUDCD1-204ENST00000521439 SPINT4Q6UDR6 99 aa3.53□□□□□ -1.84
NUDCD1-204ENST00000521439 Q8IZM0 81 aa3.53□□□□□ -1.84
NUDCD1-204ENST00000521439 NBEAQ8NFP9 2946 aa3.53□□□□□ -1.84
NUDCD1-204ENST00000521439 MKI67P46013 3256 aaKnown RBP3.52□□□□□ -1.85
NUDCD1-204ENST00000521439 TNRC18O15417 2968 aaPredicted RBP3.52□□□□□ -1.85
NUDCD1-204ENST00000521439 A0A1B0GU33 70 aa3.52□□□□□ -1.85
NUDCD1-204ENST00000521439 COX7BP24311 80 aa3.52□□□□□ -1.85
NUDCD1-204ENST00000521439 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
NUDCD1-204ENST00000521439 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
NUDCD1-204ENST00000521439 C4orf3Q8WVX3 66 aa3.52□□□□□ -1.85
NUDCD1-204ENST00000521439 COL6A3P12111 3177 aa3.51□□□□□ -1.85
NUDCD1-204ENST00000521439 LINC00158P58513 81 aa3.51□□□□□ -1.85
NUDCD1-204ENST00000521439 ZFHX3Q15911 3703 aa3.51□□□□□ -1.85
NUDCD1-204ENST00000521439 DEFB1P60022 68 aa3.5□□□□□ -1.85
NUDCD1-204ENST00000521439 DOPEY2Q9Y3R5 2298 aa3.5□□□□□ -1.85
NUDCD1-204ENST00000521439 REV3LO60673 3130 aa3.5□□□□□ -1.85
NUDCD1-204ENST00000521439 LAMA2P24043 3122 aaKnown RBP3.49□□□□□ -1.85
NUDCD1-204ENST00000521439 PRB1P04280 392 aa3.49□□□□□ -1.85
NUDCD1-204ENST00000521439 SPINK13Q1W4C9 94 aa3.49□□□□□ -1.85
NUDCD1-204ENST00000521439 FRYQ5TBA9 3013 aa3.49□□□□□ -1.85
NUDCD1-204ENST00000521439 SDK1Q7Z5N4 2213 aa3.49□□□□□ -1.85
NUDCD1-204ENST00000521439 ZZEF1O43149 2961 aa3.49□□□□□ -1.85
NUDCD1-204ENST00000521439 PTPRQQ9UMZ3 2332 aa3.49□□□□□ -1.85
NUDCD1-204ENST00000521439 A0A1B0GU69 56 aa3.48□□□□□ -1.85
NUDCD1-204ENST00000521439 IGLV6-57P01721 117 aa3.48□□□□□ -1.85
NUDCD1-204ENST00000521439 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
NUDCD1-204ENST00000521439 DEFB104AQ8WTQ1 72 aa3.48□□□□□ -1.85
NUDCD1-204ENST00000521439 LAMA1P25391 3075 aa3.47□□□□□ -1.85
NUDCD1-204ENST00000521439 TRGV1A0A0A0MS02 117 aa3.47□□□□□ -1.85
NUDCD1-204ENST00000521439 PRB3Q04118 309 aaPredicted RBP3.47□□□□□ -1.85
NUDCD1-204ENST00000521439 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
NUDCD1-204ENST00000521439 LAMA3Q16787 3333 aa3.46□□□□□ -1.86
NUDCD1-204ENST00000521439 LYNX1G3V0Z9 82 aa3.46□□□□□ -1.86
NUDCD1-204ENST00000521439 LYNX1P0DP58 116 aa3.46□□□□□ -1.86
NUDCD1-204ENST00000521439 SPTBN5Q9NRC6 3674 aaKnown RBP3.46□□□□□ -1.86
NUDCD1-204ENST00000521439 DEFB131BA0A096LNP1 70 aa3.45□□□□□ -1.86
NUDCD1-204ENST00000521439 GVQW2A0A096LPI5 108 aaPredicted RBP3.45□□□□□ -1.86
NUDCD1-204ENST00000521439 MED13LQ71F56 2210 aa3.44□□□□□ -1.86
NUDCD1-204ENST00000521439 SPTBN2O15020 2390 aa3.44□□□□□ -1.86
NUDCD1-204ENST00000521439 A0A087WTM6 91 aa3.44□□□□□ -1.86
NUDCD1-204ENST00000521439 M0R2N4 97 aa3.44□□□□□ -1.86
NUDCD1-204ENST00000521439 Q6ZQY7 126 aa3.44□□□□□ -1.86
NUDCD1-204ENST00000521439 LINC00472Q9H8W2 130 aa3.44□□□□□ -1.86
NUDCD1-204ENST00000521439 PKDREJQ9NTG1 2253 aa3.44□□□□□ -1.86
NUDCD1-204ENST00000521439 TECTAO75443 2155 aa3.44□□□□□ -1.86
NUDCD1-204ENST00000521439 ROS1P08922 2347 aa3.43□□□□□ -1.86
NUDCD1-204ENST00000521439 WDFY3Q8IZQ1 3526 aa3.43□□□□□ -1.86
NUDCD1-204ENST00000521439 IGLV5-48A0A075B6I7 105 aa3.43□□□□□ -1.86
NUDCD1-204ENST00000521439 VPS13AQ96RL7 3174 aa3.43□□□□□ -1.86
NUDCD1-204ENST00000521439 DEFB109BQ30KR1 87 aa3.42□□□□□ -1.86
NUDCD1-204ENST00000521439 TOMM7Q9P0U1 55 aa3.42□□□□□ -1.86
NUDCD1-204ENST00000521439 TPRP12270 2363 aaKnown RBP3.42□□□□□ -1.86
NUDCD1-204ENST00000521439 VCANP13611 3396 aa3.42□□□□□ -1.86
NUDCD1-204ENST00000521439 SPTBN1Q01082 2364 aaKnown RBP3.41□□□□□ -1.86
NUDCD1-204ENST00000521439 TRIOO75962 3097 aa3.41□□□□□ -1.86
NUDCD1-204ENST00000521439 CFAP54Q96N23 3096 aa3.41□□□□□ -1.86
NUDCD1-204ENST00000521439 CEP250Q9BV73 2442 aa3.41□□□□□ -1.86
NUDCD1-204ENST00000521439 PIEZO2Q9H5I5 2752 aa3.4□□□□□ -1.86
NUDCD1-204ENST00000521439 DSPP15924 2871 aaKnown RBP3.4□□□□□ -1.86
NUDCD1-204ENST00000521439 DEFB131AP59861 70 aa3.4□□□□□ -1.87
NUDCD1-204ENST00000521439 RPL37AP61513 92 aaKnown RBP3.4□□□□□ -1.87
NUDCD1-204ENST00000521439 KALRNO60229 2985 aa3.4□□□□□ -1.87
NUDCD1-204ENST00000521439 CNOT1A5YKK6 2376 aaKnown RBP3.39□□□□□ -1.87
NUDCD1-204ENST00000521439 NBDYA0A0U1RRE5 68 aa3.39□□□□□ -1.87
NUDCD1-204ENST00000521439 FRYLO94915 3013 aa3.39□□□□□ -1.87
NUDCD1-204ENST00000521439 CDH23Q9H251 3354 aa3.39□□□□□ -1.87
NUDCD1-204ENST00000521439 Q96NJ1 140 aa3.38□□□□□ -1.87
NUDCD1-204ENST00000521439 PCNX1Q96RV3 2341 aa3.38□□□□□ -1.87
NUDCD1-204ENST00000521439 ANKHD1Q8IWZ3 2542 aaKnown RBP3.37□□□□□ -1.87
NUDCD1-204ENST00000521439 HRES1P13985 223 aa3.37□□□□□ -1.87
NUDCD1-204ENST00000521439 CFAP47Q6ZTR5 3102 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms