RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.77□□□□□ -2.13
SKP1-208ENST00000521216 LEAP2Q969E1 77 aa1.77□□□□□ -2.13
SKP1-208ENST00000521216 LINC00472Q9H8W2 130 aa1.77□□□□□ -2.13
SKP1-208ENST00000521216 TNCP24821 2201 aa1.76□□□□□ -2.13
SKP1-208ENST00000521216 PRB1P04280 392 aa1.76□□□□□ -2.13
SKP1-208ENST00000521216 ACYP2P14621 99 aa1.76□□□□□ -2.13
SKP1-208ENST00000521216 PATE1Q8WXA2 126 aa1.76□□□□□ -2.13
SKP1-208ENST00000521216 KNTC1P50748 2209 aa1.75□□□□□ -2.13
SKP1-208ENST00000521216 MALRD1Q5VYJ5 2156 aa1.75□□□□□ -2.13
SKP1-208ENST00000521216 A0A087WTM6 91 aa1.75□□□□□ -2.13
SKP1-208ENST00000521216 A0A0G2JQZ4 141 aa1.75□□□□□ -2.13
SKP1-208ENST00000521216 COX6A2Q02221 97 aa1.75□□□□□ -2.13
SKP1-208ENST00000521216 USF3Q68DE3 2245 aa1.74□□□□□ -2.13
SKP1-208ENST00000521216 UNC13CQ8NB66 2214 aa1.74□□□□□ -2.13
SKP1-208ENST00000521216 LYNX1G3V0Z9 82 aa1.74□□□□□ -2.13
SKP1-208ENST00000521216 ANGP03950 147 aaKnown RBP1.74□□□□□ -2.13
SKP1-208ENST00000521216 K7EQZ3 153 aa1.73□□□□□ -2.13
SKP1-208ENST00000521216 C10orf55Q5SWW7 151 aa1.73□□□□□ -2.13
SKP1-208ENST00000521216 KIAA0100Q14667 2235 aaKnown RBP1.72□□□□□ -2.13
SKP1-208ENST00000521216 NBDYA0A0U1RRE5 68 aa1.72□□□□□ -2.13
SKP1-208ENST00000521216 LY6G6CO95867 125 aa1.72□□□□□ -2.13
SKP1-208ENST00000521216 PRB3Q04118 309 aaPredicted RBP1.72□□□□□ -2.13
SKP1-208ENST00000521216 CCL19Q99731 98 aa1.72□□□□□ -2.13
SKP1-208ENST00000521216 CRCT1Q9UGL9 99 aa1.72□□□□□ -2.13
SKP1-208ENST00000521216 ALPK2Q86TB3 2170 aa1.71□□□□□ -2.14
SKP1-208ENST00000521216 Q96NJ1 140 aa1.71□□□□□ -2.14
SKP1-208ENST00000521216 F5P12259 2224 aa1.71□□□□□ -2.14
SKP1-208ENST00000521216 SPAG17Q6Q759 2223 aa1.7□□□□□ -2.14
SKP1-208ENST00000521216 SPTY2D1-AS1A0A0U1RR47 76 aa1.7□□□□□ -2.14
SKP1-208ENST00000521216 C5orf56Q8N8D9 126 aa1.7□□□□□ -2.14
SKP1-208ENST00000521216 PRO2289Q9P1D8 64 aa1.7□□□□□ -2.14
SKP1-208ENST00000521216 CADP27708 2225 aa1.69□□□□□ -2.14
SKP1-208ENST00000521216 DEFB131AP59861 70 aa1.69□□□□□ -2.14
SKP1-208ENST00000521216 RPL37AP61513 92 aaKnown RBP1.69□□□□□ -2.14
SKP1-208ENST00000521216 KRTAP21-3Q3LHN1 58 aa1.69□□□□□ -2.14
SKP1-208ENST00000521216 MINOS1Q5TGZ0 78 aa1.69□□□□□ -2.14
SKP1-208ENST00000521216 PRO3102Q9H379 93 aa1.69□□□□□ -2.14
SKP1-208ENST00000521216 TOMM7Q9P0U1 55 aa1.69□□□□□ -2.14
SKP1-208ENST00000521216 KAAG1Q9UBP8 84 aa1.69□□□□□ -2.14
SKP1-208ENST00000521216 Q9Y3F1 56 aa1.69□□□□□ -2.14
SKP1-208ENST00000521216 GVQW2A0A096LPI5 108 aaPredicted RBP1.68□□□□□ -2.14
SKP1-208ENST00000521216 WFDC10BQ8IUB3 73 aa1.68□□□□□ -2.14
SKP1-208ENST00000521216 C6orf48Q9UBA6 75 aa1.68□□□□□ -2.14
SKP1-208ENST00000521216 DIDO1Q9BTC0 2240 aaKnown RBP1.68□□□□□ -2.14
SKP1-208ENST00000521216 TPRXLQ17RH7 258 aa1.67□□□□□ -2.14
SKP1-208ENST00000521216 COX6B2Q6YFQ2 88 aa1.67□□□□□ -2.14
SKP1-208ENST00000521216 Q6ZSA8 131 aa1.67□□□□□ -2.14
SKP1-208ENST00000521216 WFDC13Q8IUB5 93 aa1.67□□□□□ -2.14
SKP1-208ENST00000521216 A0A0C4DFX4 3053 aa1.67□□□□□ -2.14
SKP1-208ENST00000521216 RP1P56715 2156 aa1.66□□□□□ -2.14
SKP1-208ENST00000521216 A8MTW9 85 aa1.66□□□□□ -2.14
SKP1-208ENST00000521216 DEFB110Q30KQ9 67 aa1.66□□□□□ -2.14
SKP1-208ENST00000521216 SSBP3-AS1Q7Z2R9 100 aa1.66□□□□□ -2.14
SKP1-208ENST00000521216 DEFB104AQ8WTQ1 72 aa1.66□□□□□ -2.14
SKP1-208ENST00000521216 SDK1Q7Z5N4 2213 aa1.65□□□□□ -2.15
SKP1-208ENST00000521216 MMP24-AS1A0A0U1RRL7 71 aa1.64□□□□□ -2.15
SKP1-208ENST00000521216 H3BUA1 57 aa1.64□□□□□ -2.15
SKP1-208ENST00000521216 APELAP0DMC3 54 aa1.64□□□□□ -2.15
SKP1-208ENST00000521216 MRPL34Q9BQ48 92 aaKnown RBP1.64□□□□□ -2.15
SKP1-208ENST00000521216 FBN3Q75N90 2809 aa1.64□□□□□ -2.15
SKP1-208ENST00000521216 CD52P31358 61 aa1.63□□□□□ -2.15
SKP1-208ENST00000521216 ALMS1Q8TCU4 4167 aa1.63□□□□□ -2.15
SKP1-208ENST00000521216 MED13LQ71F56 2210 aa1.63□□□□□ -2.15
SKP1-208ENST00000521216 INE1O15225 51 aa1.62□□□□□ -2.15
SKP1-208ENST00000521216 Q6ZRX8 168 aa1.62□□□□□ -2.15
SKP1-208ENST00000521216 DEFB119Q8N690 84 aa1.62□□□□□ -2.15
SKP1-208ENST00000521216 USMG5Q96IX5 58 aa1.62□□□□□ -2.15
SKP1-208ENST00000521216 PDE4DIPQ5VU43 2346 aa1.62□□□□□ -2.15
SKP1-208ENST00000521216 HELZ2Q9BYK8 2649 aaKnown RBP1.61□□□□□ -2.15
SKP1-208ENST00000521216 PTPRQQ9UMZ3 2332 aa1.61□□□□□ -2.15
SKP1-208ENST00000521216 RTTNQ86VV8 2226 aa1.61□□□□□ -2.15
SKP1-208ENST00000521216 G3V318 75 aa1.61□□□□□ -2.15
SKP1-208ENST00000521216 DEFB109BQ30KR1 87 aa1.61□□□□□ -2.15
SKP1-208ENST00000521216 CLPSL2Q6UWE3 100 aa1.61□□□□□ -2.15
SKP1-208ENST00000521216 Q6ZRN7 208 aaPredicted RBP1.61□□□□□ -2.15
SKP1-208ENST00000521216 PLAC4Q8WY50 150 aa1.61□□□□□ -2.15
SKP1-208ENST00000521216 CRIPTQ9P021 101 aa1.61□□□□□ -2.15
SKP1-208ENST00000521216 H0YAA0 97 aa1.6□□□□□ -2.15
SKP1-208ENST00000521216 SPRR1AP35321 89 aa1.6□□□□□ -2.15
SKP1-208ENST00000521216 SPACA4Q8TDM5 124 aa1.6□□□□□ -2.15
SKP1-208ENST00000521216 RHPN1-AS1Q9BWJ2 59 aa1.6□□□□□ -2.15
SKP1-208ENST00000521216 NAV3Q8IVL0 2385 aa1.6□□□□□ -2.15
SKP1-208ENST00000521216 FN1P02751 2386 aaKnown RBP1.59□□□□□ -2.15
SKP1-208ENST00000521216 ASXL3Q9C0F0 2248 aa1.59□□□□□ -2.15
SKP1-208ENST00000521216 ABCA4P78363 2273 aa1.59□□□□□ -2.15
SKP1-208ENST00000521216 SPINK13Q1W4C9 94 aa1.59□□□□□ -2.15
SKP1-208ENST00000521216 C10orf99Q6UWK7 81 aa1.59□□□□□ -2.15
SKP1-208ENST00000521216 URB1O60287 2271 aaKnown RBP1.59□□□□□ -2.16
SKP1-208ENST00000521216 H3BUX3 64 aa1.58□□□□□ -2.16
SKP1-208ENST00000521216 DEFB108BQ8NET1 73 aa1.58□□□□□ -2.16
SKP1-208ENST00000521216 DEFB105AQ8NG35 78 aa1.58□□□□□ -2.16
SKP1-208ENST00000521216 KRTAP4-1Q9BYQ7 146 aa1.58□□□□□ -2.16
SKP1-208ENST00000521216 TECTAO75443 2155 aa1.57□□□□□ -2.16
SKP1-208ENST00000521216 H1FX-AS1Q4G0G2 97 aa1.57□□□□□ -2.16
SKP1-208ENST00000521216 COL6A3P12111 3177 aa1.56□□□□□ -2.16
SKP1-208ENST00000521216 SPRR1BP22528 89 aa1.56□□□□□ -2.16
SKP1-208ENST00000521216 RPL37P61927 97 aaKnown RBP1.56□□□□□ -2.16
SKP1-208ENST00000521216 UNQ6190/PRO20217Q6UXQ8 127 aa1.56□□□□□ -2.16
SKP1-208ENST00000521216 RP1L1Q8IWN7 2480 aaPredicted RBP1.56□□□□□ -2.16
SKP1-208ENST00000521216 ASCC3Q8N3C0 2202 aaKnown RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms