RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 KRTAP26-1Q6PEX3 210 aa2.23□□□□□ -2.05
VPS13B-208ENST00000521037 Q6ZQT7 251 aa2.23□□□□□ -2.05
VPS13B-208ENST00000521037 C15orf56Q8N910 161 aa2.23□□□□□ -2.05
VPS13B-208ENST00000521037 SPACA4Q8TDM5 124 aa2.23□□□□□ -2.05
VPS13B-208ENST00000521037 RAB37Q96AX2 223 aa2.23□□□□□ -2.05
VPS13B-208ENST00000521037 TOMM6Q96B49 74 aa2.23□□□□□ -2.05
VPS13B-208ENST00000521037 TMEM141Q96I45 108 aa2.23□□□□□ -2.05
VPS13B-208ENST00000521037 LINC00477Q96M19 166 aa2.23□□□□□ -2.05
VPS13B-208ENST00000521037 SMIM2Q9BVW6 85 aa2.23□□□□□ -2.05
VPS13B-208ENST00000521037 NHP2Q9NX24 153 aaKnown RBP2.23□□□□□ -2.05
VPS13B-208ENST00000521037 TP73-AS1Q9UF72 201 aa2.23□□□□□ -2.05
VPS13B-208ENST00000521037 CYSLTR1Q9Y271 337 aa2.23□□□□□ -2.05
VPS13B-208ENST00000521037 MDN1Q9NU22 5596 aa2.23□□□□□ -2.05
VPS13B-208ENST00000521037 TRBV7-3A0A075B6L6 115 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 IGKV2-40A0A087WW87 121 aaPredicted RBP2.22□□□□□ -2.05
VPS13B-208ENST00000521037 TMSB15BA0A087X1C1 80 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 TRAV21A0A0B4J279 112 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 A0A1B0GVX0 72 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 BPY2O14599 106 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 APOMO95445 188 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 IGKV2D-40P01614 121 aaPredicted RBP2.22□□□□□ -2.05
VPS13B-208ENST00000521037 IGHV3-53P01767 116 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 IGHV3-30P01768 117 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 IGHV3-33P01772 117 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 IGHV3-30-3P0DP02 117 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 IGHV3-30-5P0DP03 117 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 HTN1P15515 57 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 UBE2D1P51668 147 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 DSCR10P59022 87 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 UBE2D3P61077 147 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 UBE2D2P62837 147 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 SMAGPQ0VAQ4 97 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 KRTAP20-1Q3LI63 56 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 SPANXN1Q5VSR9 72 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 DAZ4Q86SG3 579 aaKnown RBP2.22□□□□□ -2.05
VPS13B-208ENST00000521037 TEN1Q86WV5 123 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 RNF182Q8N6D2 247 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 PPDPFLQ8WWR9 84 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 SCGB3A1Q96QR1 104 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 DPH3P1Q9H4G8 78 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 MRPL35Q9NZE8 188 aaKnown RBP2.22□□□□□ -2.05
VPS13B-208ENST00000521037 PRO0461Q9UI25 63 aa2.22□□□□□ -2.05
VPS13B-208ENST00000521037 IGKV2D-26A0A0A0MRZ7 120 aa2.21□□□□□ -2.06
VPS13B-208ENST00000521037 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.21□□□□□ -2.06
VPS13B-208ENST00000521037 A8MWV9 139 aa2.21□□□□□ -2.06
VPS13B-208ENST00000521037 KLLNB2CW77 178 aa2.21□□□□□ -2.06
VPS13B-208ENST00000521037 ZNF80P51504 273 aaPredicted RBP2.21□□□□□ -2.06
VPS13B-208ENST00000521037 CKS1BP61024 79 aa2.21□□□□□ -2.06
VPS13B-208ENST00000521037 ETDBQ3ZM63 59 aa2.21□□□□□ -2.06
VPS13B-208ENST00000521037 CFAP126Q5VTH2 177 aa2.21□□□□□ -2.06
VPS13B-208ENST00000521037 SCGB1D4Q6XE38 83 aa2.21□□□□□ -2.06
VPS13B-208ENST00000521037 AGPAT4-IT1Q9H0P7 198 aa2.21□□□□□ -2.06
VPS13B-208ENST00000521037 GTSF1LQ9H1H1 148 aa2.21□□□□□ -2.06
VPS13B-208ENST00000521037 PHLDA3Q9Y5J5 127 aa2.21□□□□□ -2.06
VPS13B-208ENST00000521037 KMT2DO14686 5537 aa2.21□□□□□ -2.06
VPS13B-208ENST00000521037 TRBV6-5A0A0K0K1A5 114 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 C11orf86A6NJI1 115 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 ZNF815PA8K554 130 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 K7ERJ3 54 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 SPINK8P0C7L1 97 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 SCGB1C2P0DMR2 95 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 LINC00694P0DN24 101 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 S100A4P26447 101 aaKnown RBP2.2□□□□□ -2.06
VPS13B-208ENST00000521037 RHOHQ15669 191 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 Q6Q795 121 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 SLC25A29Q8N8R3 303 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 Q8TAT8 98 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 PLEKHB2Q96CS7 222 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 ODF3Q96PU9 254 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 NAA38Q9BRA0 125 aaKnown RBP2.2□□□□□ -2.06
VPS13B-208ENST00000521037 PRADC1Q9BSG0 188 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 SPANXCQ9NY87 97 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 PRO1854Q9UHT4 67 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 PSORS1C2Q9UIG4 136 aa2.2□□□□□ -2.06
VPS13B-208ENST00000521037 TRGV1A0A0A0MS02 117 aa2.19□□□□□ -2.06
VPS13B-208ENST00000521037 TRAV8-3A0A0A6YYJ7 113 aa2.19□□□□□ -2.06
VPS13B-208ENST00000521037 A0A0B4J2C4 111 aa2.19□□□□□ -2.06
VPS13B-208ENST00000521037 TRBV27A0A0K0K1C4 114 aa2.19□□□□□ -2.06
VPS13B-208ENST00000521037 SDHAF1A6NFY7 115 aa2.19□□□□□ -2.06
VPS13B-208ENST00000521037 TLX1NBP0CAT3 122 aa2.19□□□□□ -2.06
VPS13B-208ENST00000521037 POLR2KP53803 58 aaKnown RBP2.19□□□□□ -2.06
VPS13B-208ENST00000521037 ATXN8Q156A1 80 aa2.19□□□□□ -2.06
VPS13B-208ENST00000521037 RNASE13Q5GAN3 156 aaKnown RBP2.19□□□□□ -2.06
VPS13B-208ENST00000521037 Q6ZUT4 128 aa2.19□□□□□ -2.06
VPS13B-208ENST00000521037 COPS9Q8WXC6 57 aa2.19□□□□□ -2.06
VPS13B-208ENST00000521037 CHCHD7Q9BUK0 85 aa2.19□□□□□ -2.06
VPS13B-208ENST00000521037 C8orf17Q9NRJ1 99 aa2.19□□□□□ -2.06
VPS13B-208ENST00000521037 RBM12B-AS1Q9P1G2 102 aa2.19□□□□□ -2.06
VPS13B-208ENST00000521037 ERG28Q9UKR5 140 aa2.19□□□□□ -2.06
VPS13B-208ENST00000521037 TRGV2A0A075B6R0 118 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 LOC107984156A0A0G2JMH3 177 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 TRBV30A0A0K0K1B3 111 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 TMEM223A0PJW6 202 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 IGIPA6NJ69 53 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 C8orf87E5RJ46 101 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 H3BT86 120 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 H3BVH4 76 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 J3QQQ9 107 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 M0R2P5 195 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 275.1 ms