RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 FAM236BA0A1B0GV22 79 aa6.54□□□□□ -1.36
SPARC-202ENST00000520687 ZNF73O43830 326 aaPredicted RBP6.54□□□□□ -1.36
SPARC-202ENST00000520687 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.54□□□□□ -1.36
SPARC-202ENST00000520687 PDE6GP18545 87 aa6.53□□□□□ -1.36
SPARC-202ENST00000520687 COX7BP24311 80 aa6.53□□□□□ -1.36
SPARC-202ENST00000520687 IGLV5-37A0A075B6J1 123 aa6.52□□□□□ -1.36
SPARC-202ENST00000520687 USP17L23D6RBM5 183 aa6.52□□□□□ -1.36
SPARC-202ENST00000520687 SLPIP03973 132 aa6.52□□□□□ -1.37
SPARC-202ENST00000520687 CCKP06307 115 aa6.52□□□□□ -1.37
SPARC-202ENST00000520687 ELOF1P60002 83 aaKnown RBP6.52□□□□□ -1.37
SPARC-202ENST00000520687 HIST1H4AP62805 103 aaKnown RBP6.52□□□□□ -1.37
SPARC-202ENST00000520687 GAGE2AQ6NT46 116 aa6.52□□□□□ -1.37
SPARC-202ENST00000520687 Q6ZRP5 223 aa6.52□□□□□ -1.37
SPARC-202ENST00000520687 NKAPP1Q8N9T2 125 aa6.52□□□□□ -1.37
SPARC-202ENST00000520687 C14orf177Q52M58 125 aa6.51□□□□□ -1.37
SPARC-202ENST00000520687 C3orf22Q8N5N4 141 aa6.51□□□□□ -1.37
SPARC-202ENST00000520687 PKIGQ9Y2B9 76 aa6.51□□□□□ -1.37
SPARC-202ENST00000520687 LOC107984640A0A0U1RRK4 108 aa6.5□□□□□ -1.37
SPARC-202ENST00000520687 UQCRQO14949 82 aa6.5□□□□□ -1.37
SPARC-202ENST00000520687 Q6JHZ5 121 aa6.5□□□□□ -1.37
SPARC-202ENST00000520687 KCNQ1DNQ9H478 68 aa6.5□□□□□ -1.37
SPARC-202ENST00000520687 C14orf132Q9NPU4 83 aa6.5□□□□□ -1.37
SPARC-202ENST00000520687 APLNQ9ULZ1 77 aa6.5□□□□□ -1.37
SPARC-202ENST00000520687 DNAH7Q8WXX0 4024 aa6.49□□□□□ -1.37
SPARC-202ENST00000520687 NUPR2A6NF83 97 aa6.49□□□□□ -1.37
SPARC-202ENST00000520687 LOC110117498A0A087WWA1 95 aa6.48□□□□□ -1.37
SPARC-202ENST00000520687 RBM3P98179 157 aaKnown RBP6.48□□□□□ -1.37
SPARC-202ENST00000520687 C9orf129Q5T035 196 aaKnown RBP6.48□□□□□ -1.37
SPARC-202ENST00000520687 UBE2DNLQ8IWF7 75 aa6.48□□□□□ -1.37
SPARC-202ENST00000520687 ATOX1O00244 68 aa6.47□□□□□ -1.37
SPARC-202ENST00000520687 PRYO14603 147 aa6.47□□□□□ -1.37
SPARC-202ENST00000520687 COX7CP15954 63 aa6.47□□□□□ -1.37
SPARC-202ENST00000520687 CNBPP62633 177 aaKnown RBP6.47□□□□□ -1.37
SPARC-202ENST00000520687 KIAA1109Q2LD37 5005 aa6.47□□□□□ -1.37
SPARC-202ENST00000520687 Q6ZQY7 126 aa6.47□□□□□ -1.37
SPARC-202ENST00000520687 LINC00528Q8N1L1 170 aa6.47□□□□□ -1.37
SPARC-202ENST00000520687 C9orf153Q5TBE3 101 aa6.46□□□□□ -1.38
SPARC-202ENST00000520687 ATP5EP2Q5VTU8 51 aa6.46□□□□□ -1.38
SPARC-202ENST00000520687 SMIM20Q8N5G0 67 aa6.46□□□□□ -1.38
SPARC-202ENST00000520687 DHRS4-AS1Q9P1J3 65 aa6.46□□□□□ -1.38
SPARC-202ENST00000520687 LAMTOR3Q9UHA4 124 aa6.46□□□□□ -1.38
SPARC-202ENST00000520687 C4orf48Q5BLP8 95 aa6.45□□□□□ -1.38
SPARC-202ENST00000520687 C7orf33Q8WU49 177 aa6.45□□□□□ -1.38
SPARC-202ENST00000520687 DSCR8Q96T75 97 aa6.45□□□□□ -1.38
SPARC-202ENST00000520687 HUWE1Q7Z6Z7 4374 aaKnown RBP6.45□□□□□ -1.38
SPARC-202ENST00000520687 FRAS1Q86XX4 4008 aa6.45□□□□□ -1.38
SPARC-202ENST00000520687 PSCAO43653 123 aa6.44□□□□□ -1.38
SPARC-202ENST00000520687 CRYGAP11844 174 aa6.44□□□□□ -1.38
SPARC-202ENST00000520687 LINC00846Q9NV44 126 aa6.44□□□□□ -1.38
SPARC-202ENST00000520687 IGLV1-50A0A075B6I6 118 aa6.44□□□□□ -1.38
SPARC-202ENST00000520687 LCE2BO14633 110 aa6.44□□□□□ -1.38
SPARC-202ENST00000520687 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
SPARC-202ENST00000520687 SPRR1AP35321 89 aa6.43□□□□□ -1.38
SPARC-202ENST00000520687 SERTAD4-AS1Q5TG53 156 aa6.43□□□□□ -1.38
SPARC-202ENST00000520687 Q6ZQT0 140 aa6.43□□□□□ -1.38
SPARC-202ENST00000520687 KRTAP4-6Q9BYQ5 205 aa6.43□□□□□ -1.38
SPARC-202ENST00000520687 UBL5Q9BZL1 73 aa6.42□□□□□ -1.38
SPARC-202ENST00000520687 STARD9Q9P2P6 4700 aa6.42□□□□□ -1.38
SPARC-202ENST00000520687 C16orf90A8MZG2 172 aa6.41□□□□□ -1.38
SPARC-202ENST00000520687 MRPL55Q7Z7F7 128 aaKnown RBP6.41□□□□□ -1.38
SPARC-202ENST00000520687 IGKV3D-7A0A0C4DH55 119 aa6.4□□□□□ -1.38
SPARC-202ENST00000520687 ETDCA0A1B0GVM5 59 aa6.4□□□□□ -1.38
SPARC-202ENST00000520687 Q6ZRX8 168 aa6.4□□□□□ -1.38
SPARC-202ENST00000520687 ABCA13Q86UQ4 5058 aa6.4□□□□□ -1.39
SPARC-202ENST00000520687 TRBV7-4A0A0J9YYF1 115 aa6.4□□□□□ -1.39
SPARC-202ENST00000520687 NBDYA0A0U1RRE5 68 aa6.4□□□□□ -1.39
SPARC-202ENST00000520687 A0A1B0GW54 56 aa6.4□□□□□ -1.39
SPARC-202ENST00000520687 KRTAP4-16G5E9R7 235 aaPredicted RBP6.4□□□□□ -1.39
SPARC-202ENST00000520687 HECTD4Q9Y4D8 3996 aa6.39□□□□□ -1.39
SPARC-202ENST00000520687 SERP2Q8N6R1 65 aa6.39□□□□□ -1.39
SPARC-202ENST00000520687 KRTAP1-5Q9BYS1 174 aa6.39□□□□□ -1.39
SPARC-202ENST00000520687 LINC00474Q9P2X8 69 aa6.39□□□□□ -1.39
SPARC-202ENST00000520687 UBR4Q5T4S7 5183 aa6.37□□□□□ -1.39
SPARC-202ENST00000520687 LINC00476Q8WZB0 136 aa6.37□□□□□ -1.39
SPARC-202ENST00000520687 RPS28P62857 69 aaKnown RBP6.36□□□□□ -1.39
SPARC-202ENST00000520687 REG3GQ6UW15 175 aa6.36□□□□□ -1.39
SPARC-202ENST00000520687 IGLV5-48A0A075B6I7 105 aa6.35□□□□□ -1.39
SPARC-202ENST00000520687 A0A087WVE0 104 aa6.35□□□□□ -1.39
SPARC-202ENST00000520687 J3KT08 172 aa6.35□□□□□ -1.39
SPARC-202ENST00000520687 FAM19A5Q7Z5A7 132 aaPredicted RBP6.35□□□□□ -1.39
SPARC-202ENST00000520687 FAM168BA1KXE4 195 aa6.35□□□□□ -1.39
SPARC-202ENST00000520687 RPL37AP8A6NKH3 93 aa6.35□□□□□ -1.39
SPARC-202ENST00000520687 LY6G6CO95867 125 aa6.35□□□□□ -1.39
SPARC-202ENST00000520687 TMEM258P61165 79 aa6.35□□□□□ -1.39
SPARC-202ENST00000520687 KRTAP7-1Q8IUC3 87 aa6.35□□□□□ -1.39
SPARC-202ENST00000520687 C9orf163Q8N9P6 203 aa6.35□□□□□ -1.39
SPARC-202ENST00000520687 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
SPARC-202ENST00000520687 LRCOL1A6NCL2 159 aa6.34□□□□□ -1.39
SPARC-202ENST00000520687 BCE1O60756 84 aa6.34□□□□□ -1.39
SPARC-202ENST00000520687 CXCL6P80162 114 aa6.34□□□□□ -1.39
SPARC-202ENST00000520687 A0A096LNI7 61 aa6.33□□□□□ -1.4
SPARC-202ENST00000520687 H0Y9J4 135 aa6.33□□□□□ -1.4
SPARC-202ENST00000520687 Q8N377 158 aa6.33□□□□□ -1.4
SPARC-202ENST00000520687 Q6ZRN7 208 aaPredicted RBP6.32□□□□□ -1.4
SPARC-202ENST00000520687 Q9BRP9 147 aa6.32□□□□□ -1.4
SPARC-202ENST00000520687 CYSTM1Q9H1C7 97 aa6.32□□□□□ -1.4
SPARC-202ENST00000520687 Q6ZVQ6 151 aa6.31□□□□□ -1.4
SPARC-202ENST00000520687 ALMS1Q8TCU4 4167 aa6.31□□□□□ -1.4
SPARC-202ENST00000520687 LINC01547P58512 204 aaPredicted RBP6.31□□□□□ -1.4
SPARC-202ENST00000520687 UBE2BP63146 152 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms