RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 LINC00167Q96N53 147 aa6.7□□□□□ -1.34
MCF2-209ENST00000520602 TM2D3Q9BRN9 247 aa6.7□□□□□ -1.34
MCF2-209ENST00000520602 F8WDY8 70 aa6.7□□□□□ -1.34
MCF2-209ENST00000520602 BPY2O14599 106 aa6.7□□□□□ -1.34
MCF2-209ENST00000520602 UQCRQO14949 82 aa6.7□□□□□ -1.34
MCF2-209ENST00000520602 ELOF1P60002 83 aaKnown RBP6.7□□□□□ -1.34
MCF2-209ENST00000520602 ATP5EP2Q5VTU8 51 aa6.69□□□□□ -1.34
MCF2-209ENST00000520602 C3orf22Q8N5N4 141 aa6.69□□□□□ -1.34
MCF2-209ENST00000520602 STAB2Q8WWQ8 2551 aa6.69□□□□□ -1.34
MCF2-209ENST00000520602 TENM3Q9P273 2699 aa6.69□□□□□ -1.34
MCF2-209ENST00000520602 SMIM20Q8N5G0 67 aa6.69□□□□□ -1.34
MCF2-209ENST00000520602 LINC01600Q96MT4 127 aa6.68□□□□□ -1.34
MCF2-209ENST00000520602 MDFIQ99750 246 aa6.68□□□□□ -1.34
MCF2-209ENST00000520602 Q6ZVQ6 151 aa6.68□□□□□ -1.34
MCF2-209ENST00000520602 PRLHP81277 87 aa6.67□□□□□ -1.34
MCF2-209ENST00000520602 REG3GQ6UW15 175 aa6.67□□□□□ -1.34
MCF2-209ENST00000520602 C20orf197Q8N268 126 aa6.67□□□□□ -1.34
MCF2-209ENST00000520602 NUPR2A6NF83 97 aa6.66□□□□□ -1.34
MCF2-209ENST00000520602 Q6ZQT0 140 aa6.66□□□□□ -1.34
MCF2-209ENST00000520602 COX7CP15954 63 aa6.66□□□□□ -1.34
MCF2-209ENST00000520602 SERP2Q8N6R1 65 aa6.65□□□□□ -1.34
MCF2-209ENST00000520602 C1orf137Q5JT78 98 aa6.65□□□□□ -1.34
MCF2-209ENST00000520602 PRYO14603 147 aa6.65□□□□□ -1.35
MCF2-209ENST00000520602 CHTF8P0CG12 524 aa6.64□□□□□ -1.35
MCF2-209ENST00000520602 NHLRC4P0CG21 123 aaPredicted RBP6.64□□□□□ -1.35
MCF2-209ENST00000520602 LINC01547P58512 204 aaPredicted RBP6.64□□□□□ -1.35
MCF2-209ENST00000520602 ST20-AS1Q8NBB2 130 aa6.64□□□□□ -1.35
MCF2-209ENST00000520602 LINC00528Q8N1L1 170 aa6.64□□□□□ -1.35
MCF2-209ENST00000520602 PKIGQ9Y2B9 76 aa6.63□□□□□ -1.35
MCF2-209ENST00000520602 TRBV7-6A0A0J9YX20 115 aa6.63□□□□□ -1.35
MCF2-209ENST00000520602 Q8N9L7 120 aa6.63□□□□□ -1.35
MCF2-209ENST00000520602 B9D2Q9BPU9 175 aa6.63□□□□□ -1.35
MCF2-209ENST00000520602 LY6G6CO95867 125 aa6.63□□□□□ -1.35
MCF2-209ENST00000520602 Q6ZRX8 168 aa6.62□□□□□ -1.35
MCF2-209ENST00000520602 ANK3Q12955 4377 aaKnown RBP6.62□□□□□ -1.35
MCF2-209ENST00000520602 KRTAP26-1Q6PEX3 210 aa6.61□□□□□ -1.35
MCF2-209ENST00000520602 KCNQ1DNQ9H478 68 aa6.61□□□□□ -1.35
MCF2-209ENST00000520602 TRRAPQ9Y4A5 3859 aa6.6□□□□□ -1.35
MCF2-209ENST00000520602 LOC110117498A0A087WWA1 95 aa6.6□□□□□ -1.35
MCF2-209ENST00000520602 PHF5AQ7RTV0 110 aaKnown RBP6.6□□□□□ -1.35
MCF2-209ENST00000520602 PKD1L1Q8TDX9 2849 aa6.6□□□□□ -1.35
MCF2-209ENST00000520602 OBSCN-AS1Q96MR7 158 aa6.59□□□□□ -1.35
MCF2-209ENST00000520602 SNURFQ9Y675 71 aa6.59□□□□□ -1.35
MCF2-209ENST00000520602 IGLV1-50A0A075B6I6 118 aa6.59□□□□□ -1.35
MCF2-209ENST00000520602 NBDYA0A0U1RRE5 68 aa6.59□□□□□ -1.35
MCF2-209ENST00000520602 DEFB116Q30KQ4 102 aa6.58□□□□□ -1.36
MCF2-209ENST00000520602 CDK2AP2O75956 126 aa6.58□□□□□ -1.36
MCF2-209ENST00000520602 C16orf90A8MZG2 172 aa6.57□□□□□ -1.36
MCF2-209ENST00000520602 LINC00474Q9P2X8 69 aa6.57□□□□□ -1.36
MCF2-209ENST00000520602 IGLV9-49A0A0B4J1Y8 123 aa6.56□□□□□ -1.36
MCF2-209ENST00000520602 Q8N377 158 aa6.56□□□□□ -1.36
MCF2-209ENST00000520602 Q9BRP9 147 aa6.56□□□□□ -1.36
MCF2-209ENST00000520602 TLX1NBP0CAT3 122 aa6.56□□□□□ -1.36
MCF2-209ENST00000520602 H0Y9J4 135 aa6.56□□□□□ -1.36
MCF2-209ENST00000520602 HRCT1Q6UXD1 115 aa6.56□□□□□ -1.36
MCF2-209ENST00000520602 APLNQ9ULZ1 77 aa6.56□□□□□ -1.36
MCF2-209ENST00000520602 A0A087WSZ3 146 aa6.55□□□□□ -1.36
MCF2-209ENST00000520602 ERC2-IT1O76042 136 aa6.55□□□□□ -1.36
MCF2-209ENST00000520602 A0A0G2JQZ4 141 aa6.54□□□□□ -1.36
MCF2-209ENST00000520602 A0A1W2PNN7 141 aa6.54□□□□□ -1.36
MCF2-209ENST00000520602 WFDC13Q8IUB5 93 aa6.54□□□□□ -1.36
MCF2-209ENST00000520602 TRBV7-4A0A0J9YYF1 115 aa6.54□□□□□ -1.36
MCF2-209ENST00000520602 CXCL6P80162 114 aa6.54□□□□□ -1.36
MCF2-209ENST00000520602 KRTAP1-5Q9BYS1 174 aa6.53□□□□□ -1.36
MCF2-209ENST00000520602 TRAV7A0A075B6U4 112 aa6.53□□□□□ -1.36
MCF2-209ENST00000520602 FAM30AQ9NZY2 134 aa6.52□□□□□ -1.37
MCF2-209ENST00000520602 EPM2AB3EWF7 344 aa6.52□□□□□ -1.37
MCF2-209ENST00000520602 LINC00476Q8WZB0 136 aa6.52□□□□□ -1.37
MCF2-209ENST00000520602 IGLV5-52A0A0A0MRZ9 124 aa6.51□□□□□ -1.37
MCF2-209ENST00000520602 LRCOL1A6NCL2 159 aa6.51□□□□□ -1.37
MCF2-209ENST00000520602 J3KT08 172 aa6.51□□□□□ -1.37
MCF2-209ENST00000520602 NDUFB1O75438 58 aa6.51□□□□□ -1.37
MCF2-209ENST00000520602 C1orf134Q5TEV5 83 aa6.51□□□□□ -1.37
MCF2-209ENST00000520602 PLA2G2DQ9UNK4 145 aa6.51□□□□□ -1.37
MCF2-209ENST00000520602 NDUFS5O43920 106 aa6.5□□□□□ -1.37
MCF2-209ENST00000520602 Q8NBF4 154 aa6.5□□□□□ -1.37
MCF2-209ENST00000520602 TMEM258P61165 79 aa6.48□□□□□ -1.37
MCF2-209ENST00000520602 C9orf163Q8N9P6 203 aa6.48□□□□□ -1.37
MCF2-209ENST00000520602 FAM236DA0A1B0GTK5 79 aa6.48□□□□□ -1.37
MCF2-209ENST00000520602 FAM236CP0DP71 79 aa6.48□□□□□ -1.37
MCF2-209ENST00000520602 CRYGAP11844 174 aa6.47□□□□□ -1.37
MCF2-209ENST00000520602 CNBPP62633 177 aaKnown RBP6.47□□□□□ -1.37
MCF2-209ENST00000520602 MP68P56378 58 aa6.46□□□□□ -1.37
MCF2-209ENST00000520602 RTL8CO15255 209 aa6.46□□□□□ -1.38
MCF2-209ENST00000520602 AKAP9Q99996 3911 aa6.46□□□□□ -1.38
MCF2-209ENST00000520602 SPINK6Q6UWN8 80 aa6.46□□□□□ -1.38
MCF2-209ENST00000520602 A0A1W2PNM2 257 aa6.45□□□□□ -1.38
MCF2-209ENST00000520602 IGLV5-37A0A075B6J1 123 aa6.45□□□□□ -1.38
MCF2-209ENST00000520602 SMIM29Q86T20 159 aa6.45□□□□□ -1.38
MCF2-209ENST00000520602 PRR4Q16378 134 aa6.44□□□□□ -1.38
MCF2-209ENST00000520602 A0A087WTM6 91 aa6.43□□□□□ -1.38
MCF2-209ENST00000520602 IGFL1Q6UW32 110 aa6.43□□□□□ -1.38
MCF2-209ENST00000520602 TMEM254Q8TBM7 123 aa6.43□□□□□ -1.38
MCF2-209ENST00000520602 ZNF706Q9Y5V0 76 aaPredicted RBP6.43□□□□□ -1.38
MCF2-209ENST00000520602 TENM2Q9NT68 2774 aa6.42□□□□□ -1.38
MCF2-209ENST00000520602 IGLV5-48A0A075B6I7 105 aa6.42□□□□□ -1.38
MCF2-209ENST00000520602 RPL37AP61513 92 aaKnown RBP6.42□□□□□ -1.38
MCF2-209ENST00000520602 BCE1O60756 84 aa6.42□□□□□ -1.38
MCF2-209ENST00000520602 IGKV4-1P06312 121 aa6.41□□□□□ -1.38
MCF2-209ENST00000520602 SPRR1AP35321 89 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms