RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 REG3GQ6UW15 175 aa5.61□□□□□ -1.51
CSMD1-208ENST00000520561 NAA38Q9BRA0 125 aaKnown RBP5.61□□□□□ -1.51
CSMD1-208ENST00000520561 HECTD4Q9Y4D8 3996 aa5.61□□□□□ -1.51
CSMD1-208ENST00000520561 ETDCA0A1B0GVM5 59 aa5.6□□□□□ -1.51
CSMD1-208ENST00000520561 SCGB1C2P0DMR2 95 aa5.6□□□□□ -1.51
CSMD1-208ENST00000520561 A0A1W2PPM0 123 aa5.59□□□□□ -1.51
CSMD1-208ENST00000520561 FABP2P12104 132 aa5.59□□□□□ -1.51
CSMD1-208ENST00000520561 H0YGX0 51 aa5.58□□□□□ -1.52
CSMD1-208ENST00000520561 COX7BP24311 80 aa5.58□□□□□ -1.52
CSMD1-208ENST00000520561 SPRR1AP35321 89 aa5.58□□□□□ -1.52
CSMD1-208ENST00000520561 DNAH8Q96JB1 4490 aa5.58□□□□□ -1.52
CSMD1-208ENST00000520561 TRBV7-6A0A0J9YX20 115 aa5.57□□□□□ -1.52
CSMD1-208ENST00000520561 BCE1O60756 84 aa5.57□□□□□ -1.52
CSMD1-208ENST00000520561 ELOF1P60002 83 aaKnown RBP5.57□□□□□ -1.52
CSMD1-208ENST00000520561 FAM19A1Q7Z5A9 133 aa5.57□□□□□ -1.52
CSMD1-208ENST00000520561 KRTAP11-1Q8IUC1 163 aa5.57□□□□□ -1.52
CSMD1-208ENST00000520561 SLC25A20O43772 301 aa5.56□□□□□ -1.52
CSMD1-208ENST00000520561 SNCGO76070 127 aa5.56□□□□□ -1.52
CSMD1-208ENST00000520561 UBE2AP49459 152 aa5.56□□□□□ -1.52
CSMD1-208ENST00000520561 Q6ZRX8 168 aa5.56□□□□□ -1.52
CSMD1-208ENST00000520561 PSORS1C2Q9UIG4 136 aa5.56□□□□□ -1.52
CSMD1-208ENST00000520561 LRP1BQ9NZR2 4599 aa5.55□□□□□ -1.52
CSMD1-208ENST00000520561 TRBV20-1A0A075B6N2 111 aa5.55□□□□□ -1.52
CSMD1-208ENST00000520561 B5MCH6 92 aa5.55□□□□□ -1.52
CSMD1-208ENST00000520561 KRTAP4-16G5E9R7 235 aaPredicted RBP5.55□□□□□ -1.52
CSMD1-208ENST00000520561 XGP55808 180 aa5.55□□□□□ -1.52
CSMD1-208ENST00000520561 ATXN8Q156A1 80 aa5.55□□□□□ -1.52
CSMD1-208ENST00000520561 C1orf137Q5JT78 98 aa5.55□□□□□ -1.52
CSMD1-208ENST00000520561 CLEC2BQ92478 149 aa5.55□□□□□ -1.52
CSMD1-208ENST00000520561 SPCS1Q9Y6A9 102 aa5.55□□□□□ -1.52
CSMD1-208ENST00000520561 DYNC1H1Q14204 4646 aaKnown RBP5.55□□□□□ -1.52
CSMD1-208ENST00000520561 A0A1B0GX51 115 aa5.54□□□□□ -1.52
CSMD1-208ENST00000520561 PRLHP81277 87 aa5.54□□□□□ -1.52
CSMD1-208ENST00000520561 LINC00528Q8N1L1 170 aa5.54□□□□□ -1.52
CSMD1-208ENST00000520561 DHRS4-AS1Q9P1J3 65 aa5.54□□□□□ -1.52
CSMD1-208ENST00000520561 LST1O00453 97 aa5.53□□□□□ -1.52
CSMD1-208ENST00000520561 CDK2AP2O75956 126 aa5.53□□□□□ -1.52
CSMD1-208ENST00000520561 TCL1BO95988 128 aa5.53□□□□□ -1.52
CSMD1-208ENST00000520561 DNAL4O96015 105 aa5.53□□□□□ -1.52
CSMD1-208ENST00000520561 LINC00575Q6W349 94 aa5.53□□□□□ -1.52
CSMD1-208ENST00000520561 GTF2H5Q6ZYL4 71 aa5.53□□□□□ -1.52
CSMD1-208ENST00000520561 A0A1B0GV90 55 aa5.52□□□□□ -1.53
CSMD1-208ENST00000520561 hADV29S1A0JD25 119 aa5.52□□□□□ -1.53
CSMD1-208ENST00000520561 H0Y9J4 135 aa5.52□□□□□ -1.53
CSMD1-208ENST00000520561 K7EP34 96 aa5.52□□□□□ -1.53
CSMD1-208ENST00000520561 INAFM2P0DMQ5 153 aa5.52□□□□□ -1.53
CSMD1-208ENST00000520561 RPL37AP61513 92 aaKnown RBP5.52□□□□□ -1.53
CSMD1-208ENST00000520561 FAM218AQ96MZ4 157 aa5.52□□□□□ -1.53
CSMD1-208ENST00000520561 HIGD2AQ9BW72 106 aa5.52□□□□□ -1.53
CSMD1-208ENST00000520561 TRACP01848 142 aa5.51□□□□□ -1.53
CSMD1-208ENST00000520561 IGLV7-43P04211 117 aa5.51□□□□□ -1.53
CSMD1-208ENST00000520561 PKHD1P08F94 4074 aa5.51□□□□□ -1.53
CSMD1-208ENST00000520561 SMR3BP02814 79 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-208ENST00000520561 KRTAP13-1Q8IUC0 172 aa5.5□□□□□ -1.53
CSMD1-208ENST00000520561 SMCR5Q8TEV8 140 aa5.5□□□□□ -1.53
CSMD1-208ENST00000520561 Q9BRP9 147 aa5.5□□□□□ -1.53
CSMD1-208ENST00000520561 H3BMG7 143 aa5.49□□□□□ -1.53
CSMD1-208ENST00000520561 ZNF861PO60384 105 aa5.49□□□□□ -1.53
CSMD1-208ENST00000520561 GHRHP01286 108 aa5.49□□□□□ -1.53
CSMD1-208ENST00000520561 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-208ENST00000520561 Q6ZQY7 126 aa5.49□□□□□ -1.53
CSMD1-208ENST00000520561 FAM229AH3BQW9 127 aa5.48□□□□□ -1.53
CSMD1-208ENST00000520561 ORMDL1Q9P0S3 153 aa5.48□□□□□ -1.53
CSMD1-208ENST00000520561 ZNF706Q9Y5V0 76 aaPredicted RBP5.48□□□□□ -1.53
CSMD1-208ENST00000520561 APOBP04114 4563 aaKnown RBP5.48□□□□□ -1.53
CSMD1-208ENST00000520561 C9JAW5 83 aa5.47□□□□□ -1.53
CSMD1-208ENST00000520561 PLA2G1BP04054 148 aaKnown RBP5.47□□□□□ -1.53
CSMD1-208ENST00000520561 OCIAD2Q56VL3 154 aa5.47□□□□□ -1.53
CSMD1-208ENST00000520561 H3BQ85 93 aa5.46□□□□□ -1.54
CSMD1-208ENST00000520561 ERC2-IT1O76042 136 aa5.46□□□□□ -1.54
CSMD1-208ENST00000520561 H3BT86 120 aa5.45□□□□□ -1.54
CSMD1-208ENST00000520561 UBE2V1Q13404 147 aa5.45□□□□□ -1.54
CSMD1-208ENST00000520561 MTURNQ8N3F0 131 aa5.45□□□□□ -1.54
CSMD1-208ENST00000520561 PPDPFLQ8WWR9 84 aa5.45□□□□□ -1.54
CSMD1-208ENST00000520561 Q5VSD8 79 aa5.44□□□□□ -1.54
CSMD1-208ENST00000520561 ST20-AS1Q8NBB2 130 aa5.44□□□□□ -1.54
CSMD1-208ENST00000520561 DEFB105AQ8NG35 78 aa5.44□□□□□ -1.54
CSMD1-208ENST00000520561 IGLV5-48A0A075B6I7 105 aa5.43□□□□□ -1.54
CSMD1-208ENST00000520561 TEX49A0A1B0GTD5 131 aa5.43□□□□□ -1.54
CSMD1-208ENST00000520561 TMEM256-PLSCR3K7ERE1 68 aa5.43□□□□□ -1.54
CSMD1-208ENST00000520561 BAALC-AS2P0C853 105 aa5.43□□□□□ -1.54
CSMD1-208ENST00000520561 SPINK6Q6UWN8 80 aa5.43□□□□□ -1.54
CSMD1-208ENST00000520561 SPRR4Q96PI1 79 aa5.43□□□□□ -1.54
CSMD1-208ENST00000520561 EPPK1P58107 5090 aaKnown RBP5.43□□□□□ -1.54
CSMD1-208ENST00000520561 GAGE2AQ6NT46 116 aa5.42□□□□□ -1.54
CSMD1-208ENST00000520561 ANKRD29Q8N6D5 301 aa5.42□□□□□ -1.54
CSMD1-208ENST00000520561 F8W1H4 67 aa5.41□□□□□ -1.54
CSMD1-208ENST00000520561 F8WEM9 126 aa5.41□□□□□ -1.54
CSMD1-208ENST00000520561 SPRR1BP22528 89 aa5.41□□□□□ -1.54
CSMD1-208ENST00000520561 LINC01547P58512 204 aaPredicted RBP5.41□□□□□ -1.54
CSMD1-208ENST00000520561 KRTAP10-4P60372 401 aaPredicted RBP5.41□□□□□ -1.54
CSMD1-208ENST00000520561 Q8N1X5 172 aa5.41□□□□□ -1.54
CSMD1-208ENST00000520561 Q8N377 158 aa5.41□□□□□ -1.54
CSMD1-208ENST00000520561 PRO0461Q9UI25 63 aa5.41□□□□□ -1.54
CSMD1-208ENST00000520561 LINC00483Q53H64 154 aa5.4□□□□□ -1.54
CSMD1-208ENST00000520561 LAMTOR3Q9UHA4 124 aa5.4□□□□□ -1.54
CSMD1-208ENST00000520561 SMCPP49901 116 aaPredicted RBP5.38□□□□□ -1.55
CSMD1-208ENST00000520561 NDUFV3P56181 108 aaKnown RBP5.38□□□□□ -1.55
CSMD1-208ENST00000520561 C3orf22Q8N5N4 141 aa5.38□□□□□ -1.55
CSMD1-208ENST00000520561 LINC01600Q96MT4 127 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms