RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 SPANXCQ9NY87 97 aa8.32□□□□□ -1.08
VEGFA-221ENST00000520265 B5MCH6 92 aa8.31□□□□□ -1.08
VEGFA-221ENST00000520265 HINT1P49773 126 aaPredicted RBP8.31□□□□□ -1.08
VEGFA-221ENST00000520265 GAGE2AQ6NT46 116 aa8.31□□□□□ -1.08
VEGFA-221ENST00000520265 HIST3H2BBQ8N257 126 aa8.31□□□□□ -1.08
VEGFA-221ENST00000520265 C3orf22Q8N5N4 141 aa8.31□□□□□ -1.08
VEGFA-221ENST00000520265 LITAFQ99732 161 aa8.31□□□□□ -1.08
VEGFA-221ENST00000520265 IGLV6-57P01721 117 aa8.3□□□□□ -1.08
VEGFA-221ENST00000520265 CBY1Q9Y3M2 126 aa8.3□□□□□ -1.08
VEGFA-221ENST00000520265 HSBP1L1C9JCN9 74 aa8.29□□□□□ -1.08
VEGFA-221ENST00000520265 KRTAP4-16G5E9R7 235 aaPredicted RBP8.29□□□□□ -1.08
VEGFA-221ENST00000520265 ZNF73O43830 326 aaPredicted RBP8.29□□□□□ -1.08
VEGFA-221ENST00000520265 JOSD1Q15040 202 aaPredicted RBP8.29□□□□□ -1.08
VEGFA-221ENST00000520265 HIST1H2BLQ99880 126 aa8.29□□□□□ -1.08
VEGFA-221ENST00000520265 Q6ZRX8 168 aa8.28□□□□□ -1.08
VEGFA-221ENST00000520265 PCP2Q8IVA1 136 aa8.28□□□□□ -1.08
VEGFA-221ENST00000520265 COPS9Q8WXC6 57 aa8.28□□□□□ -1.08
VEGFA-221ENST00000520265 IGLV9-49A0A0B4J1Y8 123 aa8.27□□□□□ -1.09
VEGFA-221ENST00000520265 ERC2-IT1O76042 136 aa8.27□□□□□ -1.09
VEGFA-221ENST00000520265 C4orf48Q5BLP8 95 aa8.27□□□□□ -1.09
VEGFA-221ENST00000520265 UBR4Q5T4S7 5183 aa8.26□□□□□ -1.09
VEGFA-221ENST00000520265 RETNLBQ9BQ08 111 aa8.26□□□□□ -1.09
VEGFA-221ENST00000520265 Q9BRP9 147 aa8.26□□□□□ -1.09
VEGFA-221ENST00000520265 SPANXDQ9BXN6 97 aa8.26□□□□□ -1.09
VEGFA-221ENST00000520265 LINC00518Q8N0U6 118 aa8.25□□□□□ -1.09
VEGFA-221ENST00000520265 LRP2P98164 4655 aa8.24□□□□□ -1.09
VEGFA-221ENST00000520265 SCGB1D1O95968 90 aa8.24□□□□□ -1.09
VEGFA-221ENST00000520265 SNRPEP62304 92 aaKnown RBP8.24□□□□□ -1.09
VEGFA-221ENST00000520265 MOBPQ13875 183 aa8.24□□□□□ -1.09
VEGFA-221ENST00000520265 Q8NBF4 154 aa8.24□□□□□ -1.09
VEGFA-221ENST00000520265 A6NDN8 102 aa8.23□□□□□ -1.09
VEGFA-221ENST00000520265 C9orf153Q5TBE3 101 aa8.23□□□□□ -1.09
VEGFA-221ENST00000520265 IFITM1P13164 125 aa8.22□□□□□ -1.09
VEGFA-221ENST00000520265 MUSTN1Q8IVN3 82 aa8.22□□□□□ -1.09
VEGFA-221ENST00000520265 COX7BP24311 80 aa8.21□□□□□ -1.1
VEGFA-221ENST00000520265 C6orf99Q4VX62 202 aa8.21□□□□□ -1.1
VEGFA-221ENST00000520265 LINC00483Q53H64 154 aa8.2□□□□□ -1.1
VEGFA-221ENST00000520265 SPAG11AQ6PDA7 123 aa8.2□□□□□ -1.1
VEGFA-221ENST00000520265 Q6ZVH6 145 aa8.2□□□□□ -1.1
VEGFA-221ENST00000520265 ST20-AS1Q8NBB2 130 aa8.2□□□□□ -1.1
VEGFA-221ENST00000520265 DHRS4-AS1Q9P1J3 65 aa8.18□□□□□ -1.1
VEGFA-221ENST00000520265 DEFB105AQ8NG35 78 aa8.16□□□□□ -1.1
VEGFA-221ENST00000520265 TRAV13-2A0A0B4J235 113 aa8.15□□□□□ -1.1
VEGFA-221ENST00000520265 ELOF1P60002 83 aaKnown RBP8.15□□□□□ -1.1
VEGFA-221ENST00000520265 LPAP08519 4548 aa8.15□□□□□ -1.1
VEGFA-221ENST00000520265 IGLV7-46A0A075B6I9 117 aa8.14□□□□□ -1.11
VEGFA-221ENST00000520265 C5orf52A6NGY3 159 aa8.14□□□□□ -1.11
VEGFA-221ENST00000520265 TAL2Q16559 108 aa8.14□□□□□ -1.11
VEGFA-221ENST00000520265 SLC25A34Q6PIV7 304 aa8.14□□□□□ -1.11
VEGFA-221ENST00000520265 SPINK1P00995 79 aa8.13□□□□□ -1.11
VEGFA-221ENST00000520265 SSBP3-AS1Q7Z2R9 100 aa8.13□□□□□ -1.11
VEGFA-221ENST00000520265 A0A1B0GWB2 263 aa8.12□□□□□ -1.11
VEGFA-221ENST00000520265 HIST1H4GQ99525 98 aa8.12□□□□□ -1.11
VEGFA-221ENST00000520265 C12orf57Q99622 126 aa8.12□□□□□ -1.11
VEGFA-221ENST00000520265 CDIP1Q9H305 208 aa8.12□□□□□ -1.11
VEGFA-221ENST00000520265 CTAG1AP78358 180 aa8.11□□□□□ -1.11
VEGFA-221ENST00000520265 Q1RN00 199 aa8.11□□□□□ -1.11
VEGFA-221ENST00000520265 LAMTOR3Q9UHA4 124 aa8.11□□□□□ -1.11
VEGFA-221ENST00000520265 PAM16Q9Y3D7 125 aa8.11□□□□□ -1.11
VEGFA-221ENST00000520265 A4D1N5 150 aa8.1□□□□□ -1.11
VEGFA-221ENST00000520265 SMIM11BQ8TCY0 68 aa8.1□□□□□ -1.11
VEGFA-221ENST00000520265 TRBV7-6A0A0J9YX20 115 aa8.09□□□□□ -1.11
VEGFA-221ENST00000520265 HRCT1Q6UXD1 115 aa8.09□□□□□ -1.11
VEGFA-221ENST00000520265 SLC25A20O43772 301 aa8.08□□□□□ -1.12
VEGFA-221ENST00000520265 COX8AP10176 69 aa8.08□□□□□ -1.12
VEGFA-221ENST00000520265 VAMP3Q15836 100 aa8.08□□□□□ -1.12
VEGFA-221ENST00000520265 SPATA45Q537H7 98 aa8.08□□□□□ -1.12
VEGFA-221ENST00000520265 C14orf144Q96I85 54 aa8.08□□□□□ -1.12
VEGFA-221ENST00000520265 VAMP8Q9BV40 100 aa8.08□□□□□ -1.12
VEGFA-221ENST00000520265 NHP2Q9NX24 153 aaKnown RBP8.08□□□□□ -1.12
VEGFA-221ENST00000520265 RNF213Q63HN8 5207 aa8.07□□□□□ -1.12
VEGFA-221ENST00000520265 TEX49A0A1B0GTD5 131 aa8.06□□□□□ -1.12
VEGFA-221ENST00000520265 FP248Q71RG6 208 aaPredicted RBP8.06□□□□□ -1.12
VEGFA-221ENST00000520265 H7C2G1 150 aa8.05□□□□□ -1.12
VEGFA-221ENST00000520265 SPRR1BP22528 89 aa8.05□□□□□ -1.12
VEGFA-221ENST00000520265 TPRXLQ17RH7 258 aa8.05□□□□□ -1.12
VEGFA-221ENST00000520265 TMA7Q9Y2S6 64 aaKnown RBP8.05□□□□□ -1.12
VEGFA-221ENST00000520265 Q8N377 158 aa8.03□□□□□ -1.12
VEGFA-221ENST00000520265 RPS29P62273 56 aaKnown RBP8.02□□□□□ -1.13
VEGFA-221ENST00000520265 RAB37Q96AX2 223 aa8.02□□□□□ -1.13
VEGFA-221ENST00000520265 LIMD2Q9BT23 127 aa8.02□□□□□ -1.13
VEGFA-221ENST00000520265 F8WEM9 126 aa8.01□□□□□ -1.13
VEGFA-221ENST00000520265 DLEU1O43261 78 aa8.01□□□□□ -1.13
VEGFA-221ENST00000520265 PRO1933Q9H354 126 aa8.01□□□□□ -1.13
VEGFA-221ENST00000520265 hADV29S1A0JD25 119 aa7.99□□□□□ -1.13
VEGFA-221ENST00000520265 IGLV5-48A0A075B6I7 105 aa7.98□□□□□ -1.13
VEGFA-221ENST00000520265 LINC00575Q6W349 94 aa7.98□□□□□ -1.13
VEGFA-221ENST00000520265 Q6ZQY7 126 aa7.98□□□□□ -1.13
VEGFA-221ENST00000520265 LINC01547P58512 204 aaPredicted RBP7.97□□□□□ -1.13
VEGFA-221ENST00000520265 BVES-AS1Q5T3Y7 98 aa7.97□□□□□ -1.13
VEGFA-221ENST00000520265 A0A0G2JQZ4 141 aa7.96□□□□□ -1.14
VEGFA-221ENST00000520265 SMIM29Q86T20 159 aa7.96□□□□□ -1.14
VEGFA-221ENST00000520265 HIGD1BQ9P298 99 aa7.96□□□□□ -1.14
VEGFA-221ENST00000520265 CFC1BP0CG36 223 aa7.95□□□□□ -1.14
VEGFA-221ENST00000520265 CFC1P0CG37 223 aa7.95□□□□□ -1.14
VEGFA-221ENST00000520265 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
VEGFA-221ENST00000520265 TMEM238LA0A1B0GVL6 79 aa7.94□□□□□ -1.14
VEGFA-221ENST00000520265 A6NJY4 79 aa7.94□□□□□ -1.14
VEGFA-221ENST00000520265 C2orf91Q6ZV80 131 aa7.94□□□□□ -1.14
VEGFA-221ENST00000520265 A0A0U1RQV1 116 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms