RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 LINC00158P58513 81 aa3.39□□□□□ -1.87
CTNNA1-217ENST00000519634 PMVKQ15126 192 aa3.39□□□□□ -1.87
CTNNA1-217ENST00000519634 NCR3O14931 201 aa3.38□□□□□ -1.87
CTNNA1-217ENST00000519634 BOD1L2Q8IYS8 172 aa3.38□□□□□ -1.87
CTNNA1-217ENST00000519634 TRBV10-3A0A0K0K1G6 114 aa3.37□□□□□ -1.87
CTNNA1-217ENST00000519634 IGLC3P0DOY3 106 aa3.37□□□□□ -1.87
CTNNA1-217ENST00000519634 TCTE3Q8IZS6 198 aa3.37□□□□□ -1.87
CTNNA1-217ENST00000519634 Q9BRP9 147 aa3.37□□□□□ -1.87
CTNNA1-217ENST00000519634 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-217ENST00000519634 ATP6V1G1O75348 118 aa3.36□□□□□ -1.87
CTNNA1-217ENST00000519634 ZNF22P17026 224 aaPredicted RBP3.36□□□□□ -1.87
CTNNA1-217ENST00000519634 KIAA1644Q3SXP7 199 aa3.36□□□□□ -1.87
CTNNA1-217ENST00000519634 HRCT1Q6UXD1 115 aa3.36□□□□□ -1.87
CTNNA1-217ENST00000519634 Q6ZRX8 168 aa3.36□□□□□ -1.87
CTNNA1-217ENST00000519634 A0A0U1RRA0 63 aa3.35□□□□□ -1.87
CTNNA1-217ENST00000519634 C5orf52A6NGY3 159 aa3.35□□□□□ -1.87
CTNNA1-217ENST00000519634 C9JQL5 133 aa3.35□□□□□ -1.87
CTNNA1-217ENST00000519634 JOSD1Q15040 202 aaPredicted RBP3.35□□□□□ -1.87
CTNNA1-217ENST00000519634 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
CTNNA1-217ENST00000519634 SLC25A34Q6PIV7 304 aa3.35□□□□□ -1.87
CTNNA1-217ENST00000519634 FA2HQ7L5A8 372 aa3.35□□□□□ -1.87
CTNNA1-217ENST00000519634 CD164Q04900 197 aa3.34□□□□□ -1.87
CTNNA1-217ENST00000519634 PEA15Q15121 130 aa3.34□□□□□ -1.87
CTNNA1-217ENST00000519634 LITAFQ99732 161 aa3.34□□□□□ -1.87
CTNNA1-217ENST00000519634 C20orf202A1L168 122 aa3.33□□□□□ -1.88
CTNNA1-217ENST00000519634 LINC01546A6NGU7 62 aa3.33□□□□□ -1.88
CTNNA1-217ENST00000519634 MT2AP02795 61 aa3.33□□□□□ -1.88
CTNNA1-217ENST00000519634 SMIM13P0DJ93 91 aa3.33□□□□□ -1.88
CTNNA1-217ENST00000519634 DDTP30046 118 aa3.33□□□□□ -1.88
CTNNA1-217ENST00000519634 NDUFA6P56556 154 aa3.33□□□□□ -1.88
CTNNA1-217ENST00000519634 TMEM170BQ5T4T1 132 aa3.33□□□□□ -1.88
CTNNA1-217ENST00000519634 Q5XG85 94 aa3.33□□□□□ -1.88
CTNNA1-217ENST00000519634 MIR7-3HGQ8N6C7 128 aa3.33□□□□□ -1.88
CTNNA1-217ENST00000519634 TRBV10-2A0A0K0K1G8 114 aa3.32□□□□□ -1.88
CTNNA1-217ENST00000519634 LINC00587B1AMM8 73 aa3.32□□□□□ -1.88
CTNNA1-217ENST00000519634 MEIG1Q5JSS6 88 aa3.32□□□□□ -1.88
CTNNA1-217ENST00000519634 C1orf195Q5TG92 126 aa3.32□□□□□ -1.88
CTNNA1-217ENST00000519634 ST20-AS1Q8NBB2 130 aa3.32□□□□□ -1.88
CTNNA1-217ENST00000519634 LAMTOR3Q9UHA4 124 aa3.32□□□□□ -1.88
CTNNA1-217ENST00000519634 H7C2G1 150 aa3.31□□□□□ -1.88
CTNNA1-217ENST00000519634 SPRR1BP22528 89 aa3.31□□□□□ -1.88
CTNNA1-217ENST00000519634 HERV-K104P63124 156 aa3.31□□□□□ -1.88
CTNNA1-217ENST00000519634 KRTAP19-6Q3LI70 58 aa3.31□□□□□ -1.88
CTNNA1-217ENST00000519634 ATP11AUNQ6ZP68 121 aa3.31□□□□□ -1.88
CTNNA1-217ENST00000519634 NOTCH2NLQ7Z3S9 236 aa3.31□□□□□ -1.88
CTNNA1-217ENST00000519634 C11orf86A6NJI1 115 aa3.3□□□□□ -1.88
CTNNA1-217ENST00000519634 MT-ND4LP03901 98 aa3.3□□□□□ -1.88
CTNNA1-217ENST00000519634 MT1FP04733 61 aa3.3□□□□□ -1.88
CTNNA1-217ENST00000519634 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
CTNNA1-217ENST00000519634 MAP1LC3CQ9BXW4 147 aa3.3□□□□□ -1.88
CTNNA1-217ENST00000519634 PRO1933Q9H354 126 aa3.3□□□□□ -1.88
CTNNA1-217ENST00000519634 SMCO4Q9NRQ5 59 aa3.3□□□□□ -1.88
CTNNA1-217ENST00000519634 SPANXB1Q9NS25 103 aaPredicted RBP3.3□□□□□ -1.88
CTNNA1-217ENST00000519634 CHTOPQ9Y3Y2 248 aaKnown RBP3.3□□□□□ -1.88
CTNNA1-217ENST00000519634 TRAV23DV6A0A075B6W5 121 aa3.29□□□□□ -1.88
CTNNA1-217ENST00000519634 HINT1P49773 126 aaPredicted RBP3.29□□□□□ -1.88
CTNNA1-217ENST00000519634 S100A7L2Q5SY68 101 aa3.29□□□□□ -1.88
CTNNA1-217ENST00000519634 TRBV20-1A0A075B6N2 111 aa3.28□□□□□ -1.88
CTNNA1-217ENST00000519634 LOC107984156A0A0G2JMH3 177 aa3.28□□□□□ -1.88
CTNNA1-217ENST00000519634 TMEM223A0PJW6 202 aa3.28□□□□□ -1.88
CTNNA1-217ENST00000519634 ZNF73O43830 326 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-217ENST00000519634 C10orf91Q5T1B1 145 aa3.28□□□□□ -1.88
CTNNA1-217ENST00000519634 BAGE3Q86Y29 109 aa3.28□□□□□ -1.88
CTNNA1-217ENST00000519634 ARL17AQ8IVW1 177 aa3.28□□□□□ -1.88
CTNNA1-217ENST00000519634 CBY1Q9Y3M2 126 aa3.28□□□□□ -1.88
CTNNA1-217ENST00000519634 AKR1D1P51857 326 aa3.27□□□□□ -1.89
CTNNA1-217ENST00000519634 DHRS4-AS1Q9P1J3 65 aa3.27□□□□□ -1.89
CTNNA1-217ENST00000519634 MYMXA0A1B0GTQ4 84 aa3.26□□□□□ -1.89
CTNNA1-217ENST00000519634 NDUFC2O95298 119 aa3.26□□□□□ -1.89
CTNNA1-217ENST00000519634 TCL1BO95988 128 aa3.26□□□□□ -1.89
CTNNA1-217ENST00000519634 HBDP02042 147 aa3.26□□□□□ -1.89
CTNNA1-217ENST00000519634 COMMD7Q86VX2 200 aa3.26□□□□□ -1.89
CTNNA1-217ENST00000519634 MIEN1Q9BRT3 115 aa3.26□□□□□ -1.89
CTNNA1-217ENST00000519634 A0A096LNJ9 63 aa3.25□□□□□ -1.89
CTNNA1-217ENST00000519634 TAL2Q16559 108 aa3.25□□□□□ -1.89
CTNNA1-217ENST00000519634 Q1RN00 199 aa3.25□□□□□ -1.89
CTNNA1-217ENST00000519634 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
CTNNA1-217ENST00000519634 ADAMTSL4-AS1Q5T5F5 129 aa3.25□□□□□ -1.89
CTNNA1-217ENST00000519634 PRAC1Q96KF2 57 aa3.25□□□□□ -1.89
CTNNA1-217ENST00000519634 NEBP20929 6669 aa3.25□□□□□ -1.89
CTNNA1-217ENST00000519634 C6orf99Q4VX62 202 aa3.24□□□□□ -1.89
CTNNA1-217ENST00000519634 PCP2Q8IVA1 136 aa3.24□□□□□ -1.89
CTNNA1-217ENST00000519634 OBSCN-AS1Q96MR7 158 aa3.24□□□□□ -1.89
CTNNA1-217ENST00000519634 TEX49A0A1B0GTD5 131 aa3.23□□□□□ -1.89
CTNNA1-217ENST00000519634 LINC00614P0C842 121 aa3.23□□□□□ -1.89
CTNNA1-217ENST00000519634 IFITM2Q01629 132 aa3.23□□□□□ -1.89
CTNNA1-217ENST00000519634 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
CTNNA1-217ENST00000519634 DEFB105AQ8NG35 78 aa3.23□□□□□ -1.89
CTNNA1-217ENST00000519634 C20orf166-AS1Q96NR2 134 aa3.23□□□□□ -1.89
CTNNA1-217ENST00000519634 TRAV12-1A0A0B4J245 112 aa3.22□□□□□ -1.89
CTNNA1-217ENST00000519634 FAM236DA0A1B0GTK5 79 aa3.22□□□□□ -1.89
CTNNA1-217ENST00000519634 FAM236CP0DP71 79 aa3.22□□□□□ -1.89
CTNNA1-217ENST00000519634 LGALS3P17931 250 aaKnown RBP3.22□□□□□ -1.89
CTNNA1-217ENST00000519634 FABP9Q0Z7S8 132 aa3.22□□□□□ -1.89
CTNNA1-217ENST00000519634 PMCHL1Q16048 86 aa3.22□□□□□ -1.89
CTNNA1-217ENST00000519634 COX19Q49B96 90 aa3.22□□□□□ -1.89
CTNNA1-217ENST00000519634 SEC11CQ9BY50 192 aa3.22□□□□□ -1.89
CTNNA1-217ENST00000519634 A0A0G2JQZ4 141 aa3.21□□□□□ -1.9
CTNNA1-217ENST00000519634 RHEBQ15382 184 aa3.21□□□□□ -1.9
CTNNA1-217ENST00000519634 COX7BP24311 80 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms