RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 TRAV13-2A0A0B4J235 113 aa13.92□□□□□ -0.18
NKX6-3-201ENST00000518699 UBE2AP49459 152 aa13.92□□□□□ -0.18
NKX6-3-201ENST00000518699 C12orf57Q99622 126 aa13.92□□□□□ -0.18
NKX6-3-201ENST00000518699 HSD52Q0P140 79 aa13.91□□□□□ -0.18
NKX6-3-201ENST00000518699 H0Y9J4 135 aa13.9□□□□□ -0.18
NKX6-3-201ENST00000518699 PRLHP81277 87 aa13.9□□□□□ -0.18
NKX6-3-201ENST00000518699 CEND1Q8N111 149 aa13.9□□□□□ -0.18
NKX6-3-201ENST00000518699 DIRC1Q969H9 104 aa13.9□□□□□ -0.18
NKX6-3-201ENST00000518699 PRO1933Q9H354 126 aa13.9□□□□□ -0.18
NKX6-3-201ENST00000518699 ZNF73O43830 326 aaPredicted RBP13.89□□□□□ -0.19
NKX6-3-201ENST00000518699 ETDCA0A1B0GVM5 59 aa13.88□□□□□ -0.19
NKX6-3-201ENST00000518699 A6NDN8 102 aa13.88□□□□□ -0.19
NKX6-3-201ENST00000518699 TMEM238LA0A1B0GVL6 79 aa13.85□□□□□ -0.19
NKX6-3-201ENST00000518699 A6NJY4 79 aa13.85□□□□□ -0.19
NKX6-3-201ENST00000518699 FLG2Q5D862 2391 aaPredicted RBP13.85□□□□□ -0.19
NKX6-3-201ENST00000518699 B5MCH6 92 aa13.84□□□□□ -0.19
NKX6-3-201ENST00000518699 FXYD2P54710 66 aa13.83□□□□□ -0.19
NKX6-3-201ENST00000518699 Q6ZRX8 168 aa13.83□□□□□ -0.19
NKX6-3-201ENST00000518699 A0A0B4J2C4 111 aa13.83□□□□□ -0.2
NKX6-3-201ENST00000518699 CFC1BP0CG36 223 aa13.83□□□□□ -0.2
NKX6-3-201ENST00000518699 CFC1P0CG37 223 aa13.83□□□□□ -0.2
NKX6-3-201ENST00000518699 TSTD3H0UI37 97 aa13.82□□□□□ -0.2
NKX6-3-201ENST00000518699 RPL13AP40429 203 aaKnown RBP13.81□□□□□ -0.2
NKX6-3-201ENST00000518699 C6orf99Q4VX62 202 aa13.81□□□□□ -0.2
NKX6-3-201ENST00000518699 MYCBP2O75592 4640 aa13.81□□□□□ -0.2
NKX6-3-201ENST00000518699 HINT1P49773 126 aaPredicted RBP13.8□□□□□ -0.2
NKX6-3-201ENST00000518699 SMIM11BQ8TCY0 68 aa13.79□□□□□ -0.2
NKX6-3-201ENST00000518699 HIGD2AQ9BW72 106 aa13.79□□□□□ -0.2
NKX6-3-201ENST00000518699 FAT3Q8TDW7 4589 aa13.78□□□□□ -0.2
NKX6-3-201ENST00000518699 TRBV7-6A0A0J9YX20 115 aa13.78□□□□□ -0.2
NKX6-3-201ENST00000518699 RAB37Q96AX2 223 aa13.78□□□□□ -0.2
NKX6-3-201ENST00000518699 OXTP01178 125 aa13.77□□□□□ -0.21
NKX6-3-201ENST00000518699 ELOF1P60002 83 aaKnown RBP13.77□□□□□ -0.21
NKX6-3-201ENST00000518699 SMCR5Q8TEV8 140 aa13.77□□□□□ -0.21
NKX6-3-201ENST00000518699 KRTAP1-4P0C5Y4 121 aa13.76□□□□□ -0.21
NKX6-3-201ENST00000518699 Q9BRP9 147 aa13.76□□□□□ -0.21
NKX6-3-201ENST00000518699 KRTAP29-1A8MX34 341 aaPredicted RBP13.75□□□□□ -0.21
NKX6-3-201ENST00000518699 COX7BP24311 80 aa13.74□□□□□ -0.21
NKX6-3-201ENST00000518699 LRP1Q07954 4544 aaKnown RBP13.74□□□□□ -0.21
NKX6-3-201ENST00000518699 A0A1B0GWB2 263 aa13.73□□□□□ -0.21
NKX6-3-201ENST00000518699 LINC01600Q96MT4 127 aa13.72□□□□□ -0.21
NKX6-3-201ENST00000518699 CTAG1AP78358 180 aa13.71□□□□□ -0.21
NKX6-3-201ENST00000518699 BVES-AS1Q5T3Y7 98 aa13.71□□□□□ -0.21
NKX6-3-201ENST00000518699 NHP2Q9NX24 153 aaKnown RBP13.71□□□□□ -0.21
NKX6-3-201ENST00000518699 PRO1854Q9UHT4 67 aa13.71□□□□□ -0.21
NKX6-3-201ENST00000518699 DHRS4-AS1Q9P1J3 65 aa13.7□□□□□ -0.22
NKX6-3-201ENST00000518699 M0R143 59 aa13.69□□□□□ -0.22
NKX6-3-201ENST00000518699 ERC2-IT1O76042 136 aa13.69□□□□□ -0.22
NKX6-3-201ENST00000518699 ZNF706Q9Y5V0 76 aaPredicted RBP13.69□□□□□ -0.22
NKX6-3-201ENST00000518699 SPRR4Q96PI1 79 aa13.68□□□□□ -0.22
NKX6-3-201ENST00000518699 H7C2G1 150 aa13.67□□□□□ -0.22
NKX6-3-201ENST00000518699 K7ERJ3 54 aa13.66□□□□□ -0.22
NKX6-3-201ENST00000518699 VAMP3Q15836 100 aa13.66□□□□□ -0.22
NKX6-3-201ENST00000518699 MT1HL1P0DM35 61 aa13.64□□□□□ -0.23
NKX6-3-201ENST00000518699 FAM229BQ4G0N7 80 aa13.64□□□□□ -0.23
NKX6-3-201ENST00000518699 Q1RN00 199 aa13.63□□□□□ -0.23
NKX6-3-201ENST00000518699 TNXBP22105 4242 aa13.61□□□□□ -0.23
NKX6-3-201ENST00000518699 LINC00483Q53H64 154 aa13.6□□□□□ -0.23
NKX6-3-201ENST00000518699 PRR26Q8N8Z3 221 aa13.6□□□□□ -0.23
NKX6-3-201ENST00000518699 A0A087X002 238 aa13.59□□□□□ -0.23
NKX6-3-201ENST00000518699 J3QL48 77 aa13.59□□□□□ -0.23
NKX6-3-201ENST00000518699 KRTAP10-8P60410 259 aa13.59□□□□□ -0.23
NKX6-3-201ENST00000518699 CRYGAP11844 174 aa13.58□□□□□ -0.23
NKX6-3-201ENST00000518699 LINC00575Q6W349 94 aa13.58□□□□□ -0.23
NKX6-3-201ENST00000518699 ANAPC11Q9NYG5 84 aa13.58□□□□□ -0.23
NKX6-3-201ENST00000518699 SLC25A20O43772 301 aa13.57□□□□□ -0.24
NKX6-3-201ENST00000518699 TSPAN13O95857 204 aa13.57□□□□□ -0.24
NKX6-3-201ENST00000518699 ST20-AS1Q8NBB2 130 aa13.57□□□□□ -0.24
NKX6-3-201ENST00000518699 H0YGX0 51 aa13.55□□□□□ -0.24
NKX6-3-201ENST00000518699 TRIAP1O43715 76 aa13.55□□□□□ -0.24
NKX6-3-201ENST00000518699 GAGE2AQ6NT46 116 aa13.55□□□□□ -0.24
NKX6-3-201ENST00000518699 SPRR1BP22528 89 aa13.53□□□□□ -0.24
NKX6-3-201ENST00000518699 hADV29S1A0JD25 119 aa13.52□□□□□ -0.25
NKX6-3-201ENST00000518699 KRTAP13-2Q52LG2 175 aa13.52□□□□□ -0.25
NKX6-3-201ENST00000518699 IGLV5-48A0A075B6I7 105 aa13.5□□□□□ -0.25
NKX6-3-201ENST00000518699 DMBT1Q9UGM3 2413 aaPredicted RBP13.5□□□□□ -0.25
NKX6-3-201ENST00000518699 PSMB2P49721 201 aa13.49□□□□□ -0.25
NKX6-3-201ENST00000518699 FAM218AQ96MZ4 157 aa13.48□□□□□ -0.25
NKX6-3-201ENST00000518699 LINC01547P58512 204 aaPredicted RBP13.47□□□□□ -0.25
NKX6-3-201ENST00000518699 BATFQ16520 125 aa13.47□□□□□ -0.25
NKX6-3-201ENST00000518699 TYMSOSQ8TAI1 123 aa13.47□□□□□ -0.25
NKX6-3-201ENST00000518699 TEX49A0A1B0GTD5 131 aa13.46□□□□□ -0.25
NKX6-3-201ENST00000518699 A0A1B0GX51 115 aa13.46□□□□□ -0.25
NKX6-3-201ENST00000518699 COX6CP09669 75 aa13.46□□□□□ -0.25
NKX6-3-201ENST00000518699 Q6ZQY7 126 aa13.46□□□□□ -0.25
NKX6-3-201ENST00000518699 C3orf22Q8N5N4 141 aa13.46□□□□□ -0.25
NKX6-3-201ENST00000518699 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.45□□□□□ -0.26
NKX6-3-201ENST00000518699 SNCGO76070 127 aa13.44□□□□□ -0.26
NKX6-3-201ENST00000518699 DEFB105AQ8NG35 78 aa13.43□□□□□ -0.26
NKX6-3-201ENST00000518699 CLEC2BQ92478 149 aa13.42□□□□□ -0.26
NKX6-3-201ENST00000518699 Q8N377 158 aa13.41□□□□□ -0.26
NKX6-3-201ENST00000518699 IGLV9-49A0A0B4J1Y8 123 aa13.39□□□□□ -0.27
NKX6-3-201ENST00000518699 PPDPFLQ8WWR9 84 aa13.39□□□□□ -0.27
NKX6-3-201ENST00000518699 LAMTOR3Q9UHA4 124 aa13.39□□□□□ -0.27
NKX6-3-201ENST00000518699 MOBPQ13875 183 aa13.38□□□□□ -0.27
NKX6-3-201ENST00000518699 SMIM29Q86T20 159 aa13.38□□□□□ -0.27
NKX6-3-201ENST00000518699 SNHG12Q9BXW3 62 aa13.38□□□□□ -0.27
NKX6-3-201ENST00000518699 OCIAD2Q56VL3 154 aa13.37□□□□□ -0.27
NKX6-3-201ENST00000518699 Q8NBF4 154 aa13.36□□□□□ -0.27
NKX6-3-201ENST00000518699 SCGB1C2P0DMR2 95 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms