RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 UBE2V1Q13404 147 aa6.64□□□□□ -1.35
PABPC1-203ENST00000517921 PHF5AQ7RTV0 110 aaKnown RBP6.64□□□□□ -1.35
PABPC1-203ENST00000517921 PLAC8Q9NZF1 115 aa6.64□□□□□ -1.35
PABPC1-203ENST00000517921 IGLV1-50A0A075B6I6 118 aa6.63□□□□□ -1.35
PABPC1-203ENST00000517921 RPL37AP8A6NKH3 93 aa6.63□□□□□ -1.35
PABPC1-203ENST00000517921 HERC2O95714 4834 aa6.63□□□□□ -1.35
PABPC1-203ENST00000517921 PSMB2P49721 201 aa6.63□□□□□ -1.35
PABPC1-203ENST00000517921 DPH3Q96FX2 82 aa6.63□□□□□ -1.35
PABPC1-203ENST00000517921 KCNQ1DNQ9H478 68 aa6.63□□□□□ -1.35
PABPC1-203ENST00000517921 PRYO14603 147 aa6.62□□□□□ -1.35
PABPC1-203ENST00000517921 C6orf99Q4VX62 202 aa6.62□□□□□ -1.35
PABPC1-203ENST00000517921 KIAA1109Q2LD37 5005 aa6.61□□□□□ -1.35
PABPC1-203ENST00000517921 ZNF73O43830 326 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-203ENST00000517921 SCXQ7RTU7 201 aa6.61□□□□□ -1.35
PABPC1-203ENST00000517921 KRTAP11-1Q8IUC1 163 aa6.61□□□□□ -1.35
PABPC1-203ENST00000517921 CIRBP-AS1Q8TBR5 109 aa6.61□□□□□ -1.35
PABPC1-203ENST00000517921 DIRC1Q969H9 104 aa6.61□□□□□ -1.35
PABPC1-203ENST00000517921 CBY1Q9Y3M2 126 aa6.61□□□□□ -1.35
PABPC1-203ENST00000517921 COX6CP09669 75 aa6.6□□□□□ -1.35
PABPC1-203ENST00000517921 FABP2P12104 132 aa6.6□□□□□ -1.35
PABPC1-203ENST00000517921 SPRR1AP35321 89 aa6.6□□□□□ -1.35
PABPC1-203ENST00000517921 LYRM7Q5U5X0 104 aa6.6□□□□□ -1.35
PABPC1-203ENST00000517921 SCGB1C2P0DMR2 95 aa6.59□□□□□ -1.35
PABPC1-203ENST00000517921 UBE2BP63146 152 aa6.59□□□□□ -1.35
PABPC1-203ENST00000517921 KRTAP4-16G5E9R7 235 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-203ENST00000517921 HAMPP81172 84 aa6.58□□□□□ -1.36
PABPC1-203ENST00000517921 VAMP3Q15836 100 aa6.58□□□□□ -1.36
PABPC1-203ENST00000517921 REG3GQ6UW15 175 aa6.58□□□□□ -1.36
PABPC1-203ENST00000517921 CLEC2BQ92478 149 aa6.58□□□□□ -1.36
PABPC1-203ENST00000517921 FAM218AQ96MZ4 157 aa6.58□□□□□ -1.36
PABPC1-203ENST00000517921 SPCS1Q9Y6A9 102 aa6.58□□□□□ -1.36
PABPC1-203ENST00000517921 TRBV7-6A0A0J9YX20 115 aa6.57□□□□□ -1.36
PABPC1-203ENST00000517921 K7EP34 96 aa6.57□□□□□ -1.36
PABPC1-203ENST00000517921 CDK2AP2O75956 126 aa6.57□□□□□ -1.36
PABPC1-203ENST00000517921 TCL1BO95988 128 aa6.57□□□□□ -1.36
PABPC1-203ENST00000517921 ELOF1P60002 83 aaKnown RBP6.57□□□□□ -1.36
PABPC1-203ENST00000517921 H0YGX0 51 aa6.56□□□□□ -1.36
PABPC1-203ENST00000517921 COX7BP24311 80 aa6.56□□□□□ -1.36
PABPC1-203ENST00000517921 TRBV20-1A0A075B6N2 111 aa6.55□□□□□ -1.36
PABPC1-203ENST00000517921 ETDCA0A1B0GVM5 59 aa6.55□□□□□ -1.36
PABPC1-203ENST00000517921 B5MCH6 92 aa6.55□□□□□ -1.36
PABPC1-203ENST00000517921 LST1O00453 97 aa6.55□□□□□ -1.36
PABPC1-203ENST00000517921 GTF2H5Q6ZYL4 71 aa6.55□□□□□ -1.36
PABPC1-203ENST00000517921 LINC00528Q8N1L1 170 aa6.55□□□□□ -1.36
PABPC1-203ENST00000517921 ATXN8Q156A1 80 aa6.54□□□□□ -1.36
PABPC1-203ENST00000517921 LINC00575Q6W349 94 aa6.54□□□□□ -1.36
PABPC1-203ENST00000517921 Q6ZRX8 168 aa6.54□□□□□ -1.36
PABPC1-203ENST00000517921 H3BMG7 143 aa6.53□□□□□ -1.36
PABPC1-203ENST00000517921 XGP55808 180 aa6.53□□□□□ -1.36
PABPC1-203ENST00000517921 FAM19A1Q7Z5A9 133 aa6.53□□□□□ -1.36
PABPC1-203ENST00000517921 PSORS1C2Q9UIG4 136 aa6.53□□□□□ -1.36
PABPC1-203ENST00000517921 FAT1Q14517 4588 aa6.53□□□□□ -1.36
PABPC1-203ENST00000517921 SRRM2Q9UQ35 2752 aaKnown RBP6.53□□□□□ -1.36
PABPC1-203ENST00000517921 RYR1P21817 5038 aa6.52□□□□□ -1.37
PABPC1-203ENST00000517921 A0A1B0GX51 115 aa6.52□□□□□ -1.37
PABPC1-203ENST00000517921 BCE1O60756 84 aa6.52□□□□□ -1.37
PABPC1-203ENST00000517921 TRACP01848 142 aa6.52□□□□□ -1.37
PABPC1-203ENST00000517921 C4orf48Q5BLP8 95 aa6.52□□□□□ -1.37
PABPC1-203ENST00000517921 Q9BRP9 147 aa6.52□□□□□ -1.37
PABPC1-203ENST00000517921 VPS13BQ7Z7G8 4022 aa6.51□□□□□ -1.37
PABPC1-203ENST00000517921 PRLHP81277 87 aa6.51□□□□□ -1.37
PABPC1-203ENST00000517921 KRTAP13-1Q8IUC0 172 aa6.51□□□□□ -1.37
PABPC1-203ENST00000517921 hADV29S1A0JD25 119 aa6.5□□□□□ -1.37
PABPC1-203ENST00000517921 H0Y9J4 135 aa6.5□□□□□ -1.37
PABPC1-203ENST00000517921 C1orf137Q5JT78 98 aa6.5□□□□□ -1.37
PABPC1-203ENST00000517921 Q8N1X5 172 aa6.5□□□□□ -1.37
PABPC1-203ENST00000517921 SMCR5Q8TEV8 140 aa6.5□□□□□ -1.37
PABPC1-203ENST00000517921 KRTAP4-5Q9BYR2 181 aa6.5□□□□□ -1.37
PABPC1-203ENST00000517921 HSPG2P98160 4391 aa6.5□□□□□ -1.37
PABPC1-203ENST00000517921 SLC25A20O43772 301 aa6.49□□□□□ -1.37
PABPC1-203ENST00000517921 INAFM2P0DMQ5 153 aa6.49□□□□□ -1.37
PABPC1-203ENST00000517921 LCE2CQ5TA81 110 aa6.49□□□□□ -1.37
PABPC1-203ENST00000517921 MTURNQ8N3F0 131 aa6.49□□□□□ -1.37
PABPC1-203ENST00000517921 DHRS4-AS1Q9P1J3 65 aa6.49□□□□□ -1.37
PABPC1-203ENST00000517921 C9JAW5 83 aa6.48□□□□□ -1.37
PABPC1-203ENST00000517921 ERC2-IT1O76042 136 aa6.48□□□□□ -1.37
PABPC1-203ENST00000517921 DNAL4O96015 105 aa6.48□□□□□ -1.37
PABPC1-203ENST00000517921 UBE2AP49459 152 aa6.48□□□□□ -1.37
PABPC1-203ENST00000517921 PRO0461Q9UI25 63 aa6.48□□□□□ -1.37
PABPC1-203ENST00000517921 PCLOQ9Y6V0 5065 aa6.48□□□□□ -1.37
PABPC1-203ENST00000517921 K7ERU9 68 aa6.47□□□□□ -1.37
PABPC1-203ENST00000517921 SNCGO76070 127 aa6.47□□□□□ -1.37
PABPC1-203ENST00000517921 OCIAD2Q56VL3 154 aa6.47□□□□□ -1.37
PABPC1-203ENST00000517921 Q6ZQY7 126 aa6.47□□□□□ -1.37
PABPC1-203ENST00000517921 IGLV7-43P04211 117 aa6.46□□□□□ -1.38
PABPC1-203ENST00000517921 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.46□□□□□ -1.38
PABPC1-203ENST00000517921 HIGD2AQ9BW72 106 aa6.46□□□□□ -1.38
PABPC1-203ENST00000517921 ORMDL1Q9P0S3 153 aa6.45□□□□□ -1.38
PABPC1-203ENST00000517921 H3BT86 120 aa6.44□□□□□ -1.38
PABPC1-203ENST00000517921 ZNF861PO60384 105 aa6.44□□□□□ -1.38
PABPC1-203ENST00000517921 SMR3BP02814 79 aaPredicted RBP6.44□□□□□ -1.38
PABPC1-203ENST00000517921 LINC01547P58512 204 aaPredicted RBP6.44□□□□□ -1.38
PABPC1-203ENST00000517921 RPL37AP61513 92 aaKnown RBP6.44□□□□□ -1.38
PABPC1-203ENST00000517921 ST20-AS1Q8NBB2 130 aa6.44□□□□□ -1.38
PABPC1-203ENST00000517921 LINC01600Q96MT4 127 aa6.43□□□□□ -1.38
PABPC1-203ENST00000517921 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
PABPC1-203ENST00000517921 ABCA13Q86UQ4 5058 aa6.42□□□□□ -1.38
PABPC1-203ENST00000517921 IGLV5-48A0A075B6I7 105 aa6.42□□□□□ -1.38
PABPC1-203ENST00000517921 F8W1H4 67 aa6.42□□□□□ -1.38
PABPC1-203ENST00000517921 BAALC-AS2P0C853 105 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms