RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 DPM2O94777 84 aa1.23□□□□□ -2.21
CPNE3-204ENST00000517862 TCRAP04437 139 aa1.23□□□□□ -2.21
CPNE3-204ENST00000517862 RNASE3P12724 160 aaKnown RBP1.23□□□□□ -2.21
CPNE3-204ENST00000517862 FABP4P15090 132 aa1.23□□□□□ -2.21
CPNE3-204ENST00000517862 UBE2D2P62837 147 aa1.23□□□□□ -2.21
CPNE3-204ENST00000517862 BORCS5Q969J3 196 aa1.23□□□□□ -2.21
CPNE3-204ENST00000517862 LINC00526Q96FQ7 95 aa1.23□□□□□ -2.21
CPNE3-204ENST00000517862 AP1S3Q96PC3 154 aa1.23□□□□□ -2.21
CPNE3-204ENST00000517862 SPANXA1Q9NS26 97 aa1.23□□□□□ -2.21
CPNE3-204ENST00000517862 MRPL36Q9P0J6 103 aaKnown RBP1.23□□□□□ -2.21
CPNE3-204ENST00000517862 TPRKBQ9Y3C4 175 aa1.23□□□□□ -2.21
CPNE3-204ENST00000517862 LOC107984156A0A0G2JMH3 177 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 TRBV7-6A0A0J9YX20 115 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 C9orf170A2RU37 121 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 RBAKDNA6NC62 111 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 LYRM1O43325 122 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 ERC2-IT1O76042 136 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 IFNGP01579 166 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 SLC25A5P05141 298 aaKnown RBP1.22□□□□□ -2.21
CPNE3-204ENST00000517862 LINC00694P0DN24 101 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 KRTAP12-4P60329 112 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 RPS29P62273 56 aaKnown RBP1.22□□□□□ -2.21
CPNE3-204ENST00000517862 S100A12P80511 92 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 MRPS36P82909 103 aaKnown RBP1.22□□□□□ -2.21
CPNE3-204ENST00000517862 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 ATP11AUNQ6ZP68 121 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 ARL17AQ8IVW1 177 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 TCTE3Q8IZS6 198 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 CLEC2BQ92478 149 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 TP53RKQ96S44 253 aa1.22□□□□□ -2.21
CPNE3-204ENST00000517862 BORCS7-ASMTA0A0B4J1R7 106 aa1.21□□□□□ -2.22
CPNE3-204ENST00000517862 SLC25A4P12235 298 aa1.21□□□□□ -2.22
CPNE3-204ENST00000517862 TPT1P13693 172 aaKnown RBP1.21□□□□□ -2.22
CPNE3-204ENST00000517862 GTF2A1P52655 376 aaPredicted RBP1.21□□□□□ -2.22
CPNE3-204ENST00000517862 SMIM3Q9BZL3 60 aa1.21□□□□□ -2.22
CPNE3-204ENST00000517862 HYPMO75409 117 aa1.2□□□□□ -2.22
CPNE3-204ENST00000517862 HBDP02042 147 aa1.2□□□□□ -2.22
CPNE3-204ENST00000517862 HMGN1P05114 100 aa1.2□□□□□ -2.22
CPNE3-204ENST00000517862 IGLC1P0CG04 106 aa1.2□□□□□ -2.22
CPNE3-204ENST00000517862 HSD17B12Q53GQ0 312 aa1.2□□□□□ -2.22
CPNE3-204ENST00000517862 RPL13AP3Q6NVV1 102 aa1.2□□□□□ -2.22
CPNE3-204ENST00000517862 NPVFQ9HCQ7 196 aa1.2□□□□□ -2.22
CPNE3-204ENST00000517862 CDC42SE1Q9NRR8 79 aa1.2□□□□□ -2.22
CPNE3-204ENST00000517862 F8W036 122 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 BCE1O60756 84 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 ARL14EPLP0DKL9 152 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 COX4I1P13073 169 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 PKIAP61925 76 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 MIR22HGQ0VDD5 57 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 CCDC58Q4VC31 144 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 C2orf82Q6UX34 121 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.19□□□□□ -2.22
CPNE3-204ENST00000517862 KRTAP19-3Q7Z4W3 81 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 ARPINQ7Z6K5 226 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 OR8J3Q8NGG0 315 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 ARHGAP5-AS1Q96IT6 56 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 BANF2Q9H503 90 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 CMC2Q9NRP2 79 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 SPANXCQ9NY87 97 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 COPZ2Q9P299 210 aa1.19□□□□□ -2.22
CPNE3-204ENST00000517862 A0A087WSZ3 146 aa1.18□□□□□ -2.22
CPNE3-204ENST00000517862 C3orf85A0A1B0GTC6 90 aa1.18□□□□□ -2.22
CPNE3-204ENST00000517862 ZNF727A8MUV8 499 aa1.18□□□□□ -2.22
CPNE3-204ENST00000517862 F8W1H4 67 aa1.18□□□□□ -2.22
CPNE3-204ENST00000517862 M0R2P5 195 aa1.18□□□□□ -2.22
CPNE3-204ENST00000517862 CORTO00230 105 aa1.18□□□□□ -2.22
CPNE3-204ENST00000517862 DNAL4O96015 105 aa1.18□□□□□ -2.22
CPNE3-204ENST00000517862 TRACP01848 142 aa1.18□□□□□ -2.22
CPNE3-204ENST00000517862 SELENOWP63302 87 aa1.18□□□□□ -2.22
CPNE3-204ENST00000517862 CFAP126Q5VTH2 177 aa1.18□□□□□ -2.22
CPNE3-204ENST00000517862 PFDN5Q99471 154 aa1.18□□□□□ -2.22
CPNE3-204ENST00000517862 NAA38Q9BRA0 125 aaKnown RBP1.18□□□□□ -2.22
CPNE3-204ENST00000517862 TNFSF18Q9UNG2 199 aa1.18□□□□□ -2.22
CPNE3-204ENST00000517862 UQCRQO14949 82 aa1.17□□□□□ -2.22
CPNE3-204ENST00000517862 SNAPC5O75971 98 aa1.17□□□□□ -2.22
CPNE3-204ENST00000517862 ZNF25P17030 456 aaPredicted RBP1.17□□□□□ -2.22
CPNE3-204ENST00000517862 SNCAP37840 140 aa1.17□□□□□ -2.22
CPNE3-204ENST00000517862 FAM74A1Q5RGS3 127 aa1.17□□□□□ -2.22
CPNE3-204ENST00000517862 C6orf201Q7Z4U5 140 aa1.17□□□□□ -2.22
CPNE3-204ENST00000517862 OR5AK2Q8NH90 309 aa1.17□□□□□ -2.22
CPNE3-204ENST00000517862 ODF3Q96PU9 254 aa1.17□□□□□ -2.22
CPNE3-204ENST00000517862 TAS2R8Q9NYW2 309 aa1.17□□□□□ -2.22
CPNE3-204ENST00000517862 COMMD3Q9UBI1 195 aa1.17□□□□□ -2.22
CPNE3-204ENST00000517862 SNURFQ9Y675 71 aa1.17□□□□□ -2.22
CPNE3-204ENST00000517862 M0R129 80 aa1.16□□□□□ -2.22
CPNE3-204ENST00000517862 CCL25O15444 150 aa1.16□□□□□ -2.22
CPNE3-204ENST00000517862 IGLC6P0CF74 106 aa1.16□□□□□ -2.22
CPNE3-204ENST00000517862 AKR1D1P51857 326 aa1.16□□□□□ -2.22
CPNE3-204ENST00000517862 TEN1Q86WV5 123 aa1.16□□□□□ -2.22
CPNE3-204ENST00000517862 OBSCN-AS1Q96MR7 158 aa1.16□□□□□ -2.22
CPNE3-204ENST00000517862 ORMDL1Q9P0S3 153 aa1.16□□□□□ -2.22
CPNE3-204ENST00000517862 TRBV6-7A0A0A0MS04 114 aa1.15□□□□□ -2.23
CPNE3-204ENST00000517862 ZNF670-ZNF695F2Z2N8 137 aa1.15□□□□□ -2.23
CPNE3-204ENST00000517862 K7ERU9 68 aa1.15□□□□□ -2.23
CPNE3-204ENST00000517862 CKS2P33552 79 aa1.15□□□□□ -2.23
CPNE3-204ENST00000517862 NEDD8Q15843 81 aa1.15□□□□□ -2.23
CPNE3-204ENST00000517862 GLIPR1L1Q6UWM5 242 aa1.15□□□□□ -2.23
CPNE3-204ENST00000517862 TMEM91Q6ZNR0 172 aa1.15□□□□□ -2.23
CPNE3-204ENST00000517862 C5orf17Q8NAS9 161 aa1.15□□□□□ -2.23
CPNE3-204ENST00000517862 TSC22D3Q99576 134 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms