RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 LINC00304Q8N9R0 145 aa4.37□□□□□ -1.71
TNFRSF11B-202ENST00000517352 FAM104AQ969W3 186 aa4.37□□□□□ -1.71
TNFRSF11B-202ENST00000517352 FAM218AQ96MZ4 157 aa4.37□□□□□ -1.71
TNFRSF11B-202ENST00000517352 LINC00167Q96N53 147 aa4.37□□□□□ -1.71
TNFRSF11B-202ENST00000517352 AMELXQ99217 191 aa4.37□□□□□ -1.71
TNFRSF11B-202ENST00000517352 IGLV5-45A0A087WSX0 123 aa4.36□□□□□ -1.71
TNFRSF11B-202ENST00000517352 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
TNFRSF11B-202ENST00000517352 LINC01549A6NIU2 74 aa4.36□□□□□ -1.71
TNFRSF11B-202ENST00000517352 HRCT1Q6UXD1 115 aa4.36□□□□□ -1.71
TNFRSF11B-202ENST00000517352 KRTAP7-1Q8IUC3 87 aa4.36□□□□□ -1.71
TNFRSF11B-202ENST00000517352 TIMM17AQ99595 171 aa4.36□□□□□ -1.71
TNFRSF11B-202ENST00000517352 RETNLBQ9BQ08 111 aa4.36□□□□□ -1.71
TNFRSF11B-202ENST00000517352 ANAPC11Q9NYG5 84 aa4.36□□□□□ -1.71
TNFRSF11B-202ENST00000517352 IGLV7-46A0A075B6I9 117 aa4.35□□□□□ -1.71
TNFRSF11B-202ENST00000517352 A0A087X002 238 aa4.35□□□□□ -1.71
TNFRSF11B-202ENST00000517352 IGIPA6NJ69 53 aa4.35□□□□□ -1.71
TNFRSF11B-202ENST00000517352 SPINK8P0C7L1 97 aa4.35□□□□□ -1.71
TNFRSF11B-202ENST00000517352 LINC00337Q8N6G1 96 aa4.35□□□□□ -1.71
TNFRSF11B-202ENST00000517352 TOMM6Q96B49 74 aa4.35□□□□□ -1.71
TNFRSF11B-202ENST00000517352 FAM229BQ4G0N7 80 aa4.34□□□□□ -1.71
TNFRSF11B-202ENST00000517352 PRLHP81277 87 aa4.33□□□□□ -1.72
TNFRSF11B-202ENST00000517352 KIAA1644Q3SXP7 199 aa4.33□□□□□ -1.72
TNFRSF11B-202ENST00000517352 FAM19A3Q7Z5A8 133 aa4.33□□□□□ -1.72
TNFRSF11B-202ENST00000517352 URB1-AS1Q96HZ7 61 aa4.33□□□□□ -1.72
TNFRSF11B-202ENST00000517352 HIGD2AQ9BW72 106 aa4.33□□□□□ -1.72
TNFRSF11B-202ENST00000517352 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
TNFRSF11B-202ENST00000517352 RBM12B-AS1Q9P1G2 102 aa4.33□□□□□ -1.72
TNFRSF11B-202ENST00000517352 SMIM26A0A096LP01 95 aa4.32□□□□□ -1.72
TNFRSF11B-202ENST00000517352 SMIM1B2RUZ4 78 aa4.32□□□□□ -1.72
TNFRSF11B-202ENST00000517352 PSPHP1O15172 72 aa4.32□□□□□ -1.72
TNFRSF11B-202ENST00000517352 HSD52Q0P140 79 aa4.32□□□□□ -1.72
TNFRSF11B-202ENST00000517352 SPAG11AQ6PDA7 123 aa4.32□□□□□ -1.72
TNFRSF11B-202ENST00000517352 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
TNFRSF11B-202ENST00000517352 ADCYAP1P18509 176 aa4.31□□□□□ -1.72
TNFRSF11B-202ENST00000517352 MP68P56378 58 aa4.31□□□□□ -1.72
TNFRSF11B-202ENST00000517352 LINC00158P58513 81 aa4.31□□□□□ -1.72
TNFRSF11B-202ENST00000517352 C6orf99Q4VX62 202 aa4.31□□□□□ -1.72
TNFRSF11B-202ENST00000517352 SFTA2Q6UW10 78 aa4.31□□□□□ -1.72
TNFRSF11B-202ENST00000517352 ZNF625Q96I27 306 aaPredicted RBP4.31□□□□□ -1.72
TNFRSF11B-202ENST00000517352 NDUFA12Q9UI09 145 aa4.31□□□□□ -1.72
TNFRSF11B-202ENST00000517352 ZNF706Q9Y5V0 76 aaPredicted RBP4.31□□□□□ -1.72
TNFRSF11B-202ENST00000517352 COX17Q14061 63 aa4.3□□□□□ -1.72
TNFRSF11B-202ENST00000517352 TMEM170BQ5T4T1 132 aa4.3□□□□□ -1.72
TNFRSF11B-202ENST00000517352 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
TNFRSF11B-202ENST00000517352 PRO1933Q9H354 126 aa4.3□□□□□ -1.72
TNFRSF11B-202ENST00000517352 IGLV5-37A0A075B6J1 123 aa4.29□□□□□ -1.72
TNFRSF11B-202ENST00000517352 J3QQQ9 107 aa4.29□□□□□ -1.72
TNFRSF11B-202ENST00000517352 TPRXLQ17RH7 258 aa4.29□□□□□ -1.72
TNFRSF11B-202ENST00000517352 PYY3Q5JQD4 70 aa4.29□□□□□ -1.72
TNFRSF11B-202ENST00000517352 Q6Q795 121 aa4.29□□□□□ -1.72
TNFRSF11B-202ENST00000517352 IMUPQ9GZP8 106 aa4.29□□□□□ -1.72
TNFRSF11B-202ENST00000517352 SND1-IT1Q9HBX3 110 aa4.29□□□□□ -1.72
TNFRSF11B-202ENST00000517352 TRAV9-1A0A075B6T8 112 aa4.28□□□□□ -1.72
TNFRSF11B-202ENST00000517352 LINC01547P58512 204 aaPredicted RBP4.28□□□□□ -1.72
TNFRSF11B-202ENST00000517352 KRTAP13-2Q52LG2 175 aa4.28□□□□□ -1.72
TNFRSF11B-202ENST00000517352 MEIG1Q5JSS6 88 aa4.28□□□□□ -1.72
TNFRSF11B-202ENST00000517352 CLLU1Q5K131 121 aa4.28□□□□□ -1.72
TNFRSF11B-202ENST00000517352 SPANXDQ9BXN6 97 aa4.28□□□□□ -1.72
TNFRSF11B-202ENST00000517352 FAT4Q6V0I7 4981 aa4.27□□□□□ -1.73
TNFRSF11B-202ENST00000517352 ETDCA0A1B0GVM5 59 aa4.27□□□□□ -1.73
TNFRSF11B-202ENST00000517352 SCGB1C2P0DMR2 95 aa4.27□□□□□ -1.73
TNFRSF11B-202ENST00000517352 Q5XG85 94 aa4.27□□□□□ -1.73
TNFRSF11B-202ENST00000517352 KRTAP5-3Q6L8H2 238 aa4.27□□□□□ -1.73
TNFRSF11B-202ENST00000517352 BAGE3Q86Y29 109 aa4.27□□□□□ -1.73
TNFRSF11B-202ENST00000517352 SEC11CQ9BY50 192 aa4.27□□□□□ -1.73
TNFRSF11B-202ENST00000517352 M0R378 163 aa4.26□□□□□ -1.73
TNFRSF11B-202ENST00000517352 FP248Q71RG6 208 aaPredicted RBP4.26□□□□□ -1.73
TNFRSF11B-202ENST00000517352 IGHV6-1A0A0B4J1U7 121 aa4.25□□□□□ -1.73
TNFRSF11B-202ENST00000517352 HBDP02042 147 aa4.25□□□□□ -1.73
TNFRSF11B-202ENST00000517352 IGLC3P0DOY3 106 aa4.25□□□□□ -1.73
TNFRSF11B-202ENST00000517352 KRTAP13-1Q8IUC0 172 aa4.25□□□□□ -1.73
TNFRSF11B-202ENST00000517352 PRR15Q8IV56 129 aa4.25□□□□□ -1.73
TNFRSF11B-202ENST00000517352 C3orf22Q8N5N4 141 aa4.25□□□□□ -1.73
TNFRSF11B-202ENST00000517352 DAND5Q8N907 189 aa4.25□□□□□ -1.73
TNFRSF11B-202ENST00000517352 NAA38Q9BRA0 125 aaKnown RBP4.25□□□□□ -1.73
TNFRSF11B-202ENST00000517352 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
TNFRSF11B-202ENST00000517352 SPINK1P00995 79 aa4.24□□□□□ -1.73
TNFRSF11B-202ENST00000517352 ZNF22P17026 224 aaPredicted RBP4.24□□□□□ -1.73
TNFRSF11B-202ENST00000517352 FAM19A2Q8N3H0 131 aa4.24□□□□□ -1.73
TNFRSF11B-202ENST00000517352 Q8NBF4 154 aa4.24□□□□□ -1.73
TNFRSF11B-202ENST00000517352 YPEL4Q96NS1 127 aa4.24□□□□□ -1.73
TNFRSF11B-202ENST00000517352 SPRR4Q96PI1 79 aa4.24□□□□□ -1.73
TNFRSF11B-202ENST00000517352 MIEN1Q9BRT3 115 aa4.24□□□□□ -1.73
TNFRSF11B-202ENST00000517352 RPS10P5Q9NQ39 176 aa4.24□□□□□ -1.73
TNFRSF11B-202ENST00000517352 TRAPPC1Q9Y5R8 145 aa4.24□□□□□ -1.73
TNFRSF11B-202ENST00000517352 IGLV5-39A0A0G2JS06 123 aa4.23□□□□□ -1.73
TNFRSF11B-202ENST00000517352 NCR3O14931 201 aa4.23□□□□□ -1.73
TNFRSF11B-202ENST00000517352 TRGC2P03986 189 aa4.23□□□□□ -1.73
TNFRSF11B-202ENST00000517352 PMCHL1Q16048 86 aa4.23□□□□□ -1.73
TNFRSF11B-202ENST00000517352 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
TNFRSF11B-202ENST00000517352 SMCR5Q8TEV8 140 aa4.23□□□□□ -1.73
TNFRSF11B-202ENST00000517352 LINC01546A6NGU7 62 aa4.22□□□□□ -1.73
TNFRSF11B-202ENST00000517352 SMIM13P0DJ93 91 aa4.22□□□□□ -1.73
TNFRSF11B-202ENST00000517352 COA6Q5JTJ3 125 aaKnown RBP4.22□□□□□ -1.73
TNFRSF11B-202ENST00000517352 S100A7L2Q5SY68 101 aa4.22□□□□□ -1.73
TNFRSF11B-202ENST00000517352 C11orf86A6NJI1 115 aa4.21□□□□□ -1.74
TNFRSF11B-202ENST00000517352 CCDC179H3BU77 68 aa4.21□□□□□ -1.74
TNFRSF11B-202ENST00000517352 HINT1P49773 126 aaPredicted RBP4.21□□□□□ -1.74
TNFRSF11B-202ENST00000517352 MOBPQ13875 183 aa4.21□□□□□ -1.74
TNFRSF11B-202ENST00000517352 C9orf153Q5TBE3 101 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms