RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 KRTAP13-2Q52LG2 175 aa7.52□□□□□ -1.21
CLCN3-210ENST00000515420 S100A7L2Q5SY68 101 aa7.52□□□□□ -1.21
CLCN3-210ENST00000515420 SPANXCQ9NY87 97 aa7.52□□□□□ -1.21
CLCN3-210ENST00000515420 ANAPC11Q9NYG5 84 aa7.52□□□□□ -1.21
CLCN3-210ENST00000515420 SNRPEP62304 92 aaKnown RBP7.51□□□□□ -1.21
CLCN3-210ENST00000515420 CTAG1AP78358 180 aa7.51□□□□□ -1.21
CLCN3-210ENST00000515420 HIST3H2BBQ8N257 126 aa7.51□□□□□ -1.21
CLCN3-210ENST00000515420 LINC00308Q8TCZ7 52 aa7.51□□□□□ -1.21
CLCN3-210ENST00000515420 EIF4EBP3O60516 100 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-210ENST00000515420 S100A2P29034 98 aa7.5□□□□□ -1.21
CLCN3-210ENST00000515420 NPC2P61916 151 aa7.5□□□□□ -1.21
CLCN3-210ENST00000515420 LRP2P98164 4655 aa7.5□□□□□ -1.21
CLCN3-210ENST00000515420 SPRR4Q96PI1 79 aa7.5□□□□□ -1.21
CLCN3-210ENST00000515420 PPDPFQ9H3Y8 114 aa7.5□□□□□ -1.21
CLCN3-210ENST00000515420 B5MCH6 92 aa7.49□□□□□ -1.21
CLCN3-210ENST00000515420 Q6ZRX8 168 aa7.49□□□□□ -1.21
CLCN3-210ENST00000515420 HIST1H2BLQ99880 126 aa7.49□□□□□ -1.21
CLCN3-210ENST00000515420 TTTY13Q9BZ97 58 aa7.49□□□□□ -1.21
CLCN3-210ENST00000515420 TRAV23DV6A0A075B6W5 121 aa7.48□□□□□ -1.21
CLCN3-210ENST00000515420 S100A6P06703 90 aa7.48□□□□□ -1.21
CLCN3-210ENST00000515420 JOSD1Q15040 202 aaPredicted RBP7.48□□□□□ -1.21
CLCN3-210ENST00000515420 ANKRD39Q53RE8 183 aa7.48□□□□□ -1.21
CLCN3-210ENST00000515420 SCGB1D4Q6XE38 83 aa7.48□□□□□ -1.21
CLCN3-210ENST00000515420 SMCR5Q8TEV8 140 aa7.48□□□□□ -1.21
CLCN3-210ENST00000515420 COPS9Q8WXC6 57 aa7.48□□□□□ -1.21
CLCN3-210ENST00000515420 SPANXDQ9BXN6 97 aa7.48□□□□□ -1.21
CLCN3-210ENST00000515420 UBR4Q5T4S7 5183 aa7.47□□□□□ -1.21
CLCN3-210ENST00000515420 ZNF73O43830 326 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-210ENST00000515420 Q6ZVH6 145 aa7.47□□□□□ -1.21
CLCN3-210ENST00000515420 LINC00518Q8N0U6 118 aa7.47□□□□□ -1.21
CLCN3-210ENST00000515420 LINC00304Q8N9R0 145 aa7.47□□□□□ -1.21
CLCN3-210ENST00000515420 IFITM1P13164 125 aa7.46□□□□□ -1.22
CLCN3-210ENST00000515420 ATOH7Q8N100 152 aa7.46□□□□□ -1.22
CLCN3-210ENST00000515420 LINC00483Q53H64 154 aa7.45□□□□□ -1.22
CLCN3-210ENST00000515420 Q9BRP9 147 aa7.45□□□□□ -1.22
CLCN3-210ENST00000515420 HINT1P49773 126 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-210ENST00000515420 KRTAP4-12Q9BQ66 201 aa7.44□□□□□ -1.22
CLCN3-210ENST00000515420 C5orf52A6NGY3 159 aa7.43□□□□□ -1.22
CLCN3-210ENST00000515420 TSPAN13O95857 204 aa7.43□□□□□ -1.22
CLCN3-210ENST00000515420 PCP2Q8IVA1 136 aa7.43□□□□□ -1.22
CLCN3-210ENST00000515420 C3orf22Q8N5N4 141 aa7.43□□□□□ -1.22
CLCN3-210ENST00000515420 OR13C6PQ8NH95 151 aa7.43□□□□□ -1.22
CLCN3-210ENST00000515420 HSBP1L1C9JCN9 74 aa7.42□□□□□ -1.22
CLCN3-210ENST00000515420 ERC2-IT1O76042 136 aa7.42□□□□□ -1.22
CLCN3-210ENST00000515420 LCE3BQ5TA77 95 aa7.42□□□□□ -1.22
CLCN3-210ENST00000515420 SPAG11AQ6PDA7 123 aa7.42□□□□□ -1.22
CLCN3-210ENST00000515420 PRR4Q16378 134 aa7.41□□□□□ -1.22
CLCN3-210ENST00000515420 GAGE2AQ6NT46 116 aa7.4□□□□□ -1.22
CLCN3-210ENST00000515420 DHRS4-AS1Q9P1J3 65 aa7.39□□□□□ -1.23
CLCN3-210ENST00000515420 TRBV7-6A0A0J9YX20 115 aa7.38□□□□□ -1.23
CLCN3-210ENST00000515420 ELOF1P60002 83 aaKnown RBP7.38□□□□□ -1.23
CLCN3-210ENST00000515420 MUSTN1Q8IVN3 82 aa7.37□□□□□ -1.23
CLCN3-210ENST00000515420 C6orf99Q4VX62 202 aa7.36□□□□□ -1.23
CLCN3-210ENST00000515420 SSBP3-AS1Q7Z2R9 100 aa7.36□□□□□ -1.23
CLCN3-210ENST00000515420 Q8NBF4 154 aa7.36□□□□□ -1.23
CLCN3-210ENST00000515420 TRAV13-2A0A0B4J235 113 aa7.35□□□□□ -1.23
CLCN3-210ENST00000515420 SCGB1D1O95968 90 aa7.35□□□□□ -1.23
CLCN3-210ENST00000515420 SPINK1P00995 79 aa7.35□□□□□ -1.23
CLCN3-210ENST00000515420 COX7BP24311 80 aa7.35□□□□□ -1.23
CLCN3-210ENST00000515420 KRTAP9-9Q9BYP9 154 aa7.35□□□□□ -1.23
CLCN3-210ENST00000515420 KRTAP9-4Q9BYQ2 154 aa7.35□□□□□ -1.23
CLCN3-210ENST00000515420 LPAP08519 4548 aa7.34□□□□□ -1.23
CLCN3-210ENST00000515420 A6NJY4 79 aa7.34□□□□□ -1.23
CLCN3-210ENST00000515420 SPRR1BP22528 89 aa7.34□□□□□ -1.23
CLCN3-210ENST00000515420 RPS29P62273 56 aaKnown RBP7.34□□□□□ -1.23
CLCN3-210ENST00000515420 SLC25A34Q6PIV7 304 aa7.34□□□□□ -1.23
CLCN3-210ENST00000515420 IGLV9-49A0A0B4J1Y8 123 aa7.33□□□□□ -1.24
CLCN3-210ENST00000515420 A0A1B0GWB2 263 aa7.33□□□□□ -1.24
CLCN3-210ENST00000515420 A6NDN8 102 aa7.33□□□□□ -1.24
CLCN3-210ENST00000515420 MOBPQ13875 183 aa7.33□□□□□ -1.24
CLCN3-210ENST00000515420 A4D1N5 150 aa7.32□□□□□ -1.24
CLCN3-210ENST00000515420 ST20-AS1Q8NBB2 130 aa7.32□□□□□ -1.24
CLCN3-210ENST00000515420 RETNLBQ9BQ08 111 aa7.32□□□□□ -1.24
CLCN3-210ENST00000515420 DLEU1O43261 78 aa7.31□□□□□ -1.24
CLCN3-210ENST00000515420 COX8AP10176 69 aa7.31□□□□□ -1.24
CLCN3-210ENST00000515420 TPRXLQ17RH7 258 aa7.31□□□□□ -1.24
CLCN3-210ENST00000515420 FP248Q71RG6 208 aaPredicted RBP7.31□□□□□ -1.24
CLCN3-210ENST00000515420 IGLV7-46A0A075B6I9 117 aa7.29□□□□□ -1.24
CLCN3-210ENST00000515420 C9orf153Q5TBE3 101 aa7.29□□□□□ -1.24
CLCN3-210ENST00000515420 NHP2Q9NX24 153 aaKnown RBP7.29□□□□□ -1.24
CLCN3-210ENST00000515420 SMIM11BQ8TCY0 68 aa7.28□□□□□ -1.24
CLCN3-210ENST00000515420 LAMTOR3Q9UHA4 124 aa7.28□□□□□ -1.24
CLCN3-210ENST00000515420 RNF213Q63HN8 5207 aa7.28□□□□□ -1.24
CLCN3-210ENST00000515420 IGLV5-48A0A075B6I7 105 aa7.26□□□□□ -1.25
CLCN3-210ENST00000515420 TEX49A0A1B0GTD5 131 aa7.26□□□□□ -1.25
CLCN3-210ENST00000515420 TAL2Q16559 108 aa7.26□□□□□ -1.25
CLCN3-210ENST00000515420 HIST1H4GQ99525 98 aa7.26□□□□□ -1.25
CLCN3-210ENST00000515420 KRTAP4-8A0A0G2JLE6 195 aa7.25□□□□□ -1.25
CLCN3-210ENST00000515420 VAMP3Q15836 100 aa7.25□□□□□ -1.25
CLCN3-210ENST00000515420 VAMP8Q9BV40 100 aa7.25□□□□□ -1.25
CLCN3-210ENST00000515420 HIGD1BQ9P298 99 aa7.25□□□□□ -1.25
CLCN3-210ENST00000515420 SLC25A20O43772 301 aa7.24□□□□□ -1.25
CLCN3-210ENST00000515420 SPATA45Q537H7 98 aa7.24□□□□□ -1.25
CLCN3-210ENST00000515420 KRTAP19-1Q8IUB9 90 aa7.24□□□□□ -1.25
CLCN3-210ENST00000515420 Q8N377 158 aa7.24□□□□□ -1.25
CLCN3-210ENST00000515420 PAM16Q9Y3D7 125 aa7.24□□□□□ -1.25
CLCN3-210ENST00000515420 LINC01547P58512 204 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-210ENST00000515420 C14orf144Q96I85 54 aa7.23□□□□□ -1.25
CLCN3-210ENST00000515420 CDIP1Q9H305 208 aa7.22□□□□□ -1.25
CLCN3-210ENST00000515420 CD164Q04900 197 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms