RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 SCN3AQ9NY46 2000 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 UBE2G1P62253 170 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 SUPT4H1P63272 117 aaKnown RBP0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 C9orf116Q5BN46 136 aaPredicted RBP0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 PSMG4Q5JS54 123 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 NCBP2-AS2Q69YL0 99 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 HCP5Q6MZN7 132 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 C2orf82Q6UX34 121 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 Q6ZQT0 140 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 MGST2Q99735 147 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 TRAPPC1Q9Y5R8 145 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 ZNF407Q9C0G0 2248 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 A0A0G2JND7 137 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 SDHAF1A6NFY7 115 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 NPYP01303 97 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 HMGN2P05204 90 aaKnown RBP0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 GCHFRP30047 84 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 C1orf134Q5TEV5 83 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 SPANXN1Q5VSR9 72 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 DEFB107AQ8IZN7 70 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 TIMM21Q9BVV7 248 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 PLCE1Q9P212 2302 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 TRAV7A0A075B6U4 112 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 MYMXA0A1B0GTQ4 84 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 H3BQ85 93 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 IGHV3-33P01772 117 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 RNASE2P10153 161 aaKnown RBP0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 RPL28P46779 137 aaKnown RBP0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 LYZL2Q7Z4W2 148 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 Q86TA4 180 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 DYNLRB2Q8TF09 96 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 AKAP6Q13023 2319 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 LPAP08519 4548 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 TRAV10A0A0B4J240 114 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 HCG22E2RYF7 251 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 J3QRE1 110 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 PPYP01298 95 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 IFI6P09912 130 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 NNATQ16517 81 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 KIAA2026Q5HYC2 2103 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 MYO7BQ6PIF6 2116 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 DEFB104AQ8WTQ1 72 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 SCGB3A1Q96QR1 104 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 NXT2Q9NPJ8 142 aaKnown RBP0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 ROS1P08922 2347 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 IGLV10-54A0A075B6I4 117 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 TRBV10-2A0A0K0K1G8 114 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 LOC285095A0A1B0GVY8 99 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 TMEM14DPA8MWL7 114 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 IQCF6A8MYZ5 107 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 IGLV7-43P04211 117 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 Q5VSD8 79 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 LYZL1Q6UWQ5 148 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 SPRR4Q96PI1 79 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 AMELXQ99217 191 aa0.79□□□□□ -2.28
AC025539.1-201ENST00000515343 TEX49A0A1B0GTD5 131 aa0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 IGHV3-53P01767 116 aa0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 DEFA4P12838 97 aa0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 ZNF833PQ6ZTB9 187 aa0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 SPTSSAQ969W0 71 aa0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 RETNLBQ9BQ08 111 aa0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 Q9BRP9 147 aa0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 TMEM14BQ9NUH8 114 aa0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 UNC13CQ8NB66 2214 aa0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 ARHGAP32A7KAX9 2087 aa0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 MED12Q93074 2177 aa0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 KRTAP10-1P60331 282 aa0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 LSM3P62310 102 aaKnown RBP0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 SSBP1Q04837 148 aaKnown RBP0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 CIRBPQ14011 172 aaKnown RBP0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 LINC00322Q6ZN03 302 aaPredicted RBP0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 Q8N6K4 173 aa0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 PATE1Q8WXA2 126 aa0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 CHCHD1Q96BP2 118 aaKnown RBP0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 SRRM2Q9UQ35 2752 aaKnown RBP0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 MDC1Q14676 2089 aaKnown RBP0.78□□□□□ -2.28
AC025539.1-201ENST00000515343 IGKV3D-11A0A0A0MRZ8 115 aa0.78□□□□□ -2.29
AC025539.1-201ENST00000515343 H3BPC8 53 aa0.78□□□□□ -2.29
AC025539.1-201ENST00000515343 IL4P05112 153 aa0.78□□□□□ -2.29
AC025539.1-201ENST00000515343 CKS2P33552 79 aa0.78□□□□□ -2.29
AC025539.1-201ENST00000515343 FAUP35544 74 aaKnown RBP0.78□□□□□ -2.29
AC025539.1-201ENST00000515343 KRTDAPP60985 99 aa0.78□□□□□ -2.29
AC025539.1-201ENST00000515343 ZNF818PQ6ZRF7 136 aa0.78□□□□□ -2.29
AC025539.1-201ENST00000515343 DEFB106AQ8N104 65 aa0.78□□□□□ -2.29
AC025539.1-201ENST00000515343 PSENENQ9NZ42 101 aa0.78□□□□□ -2.29
AC025539.1-201ENST00000515343 A0A087WTM6 91 aa0.77□□□□□ -2.29
AC025539.1-201ENST00000515343 PCBD1P61457 104 aa0.77□□□□□ -2.29
AC025539.1-201ENST00000515343 FAM27BQ5VT28 67 aa0.77□□□□□ -2.29
AC025539.1-201ENST00000515343 PP632Q6XCG6 107 aa0.77□□□□□ -2.29
AC025539.1-201ENST00000515343 DEFB108BQ8NET1 73 aa0.77□□□□□ -2.29
AC025539.1-201ENST00000515343 PPP1R1CQ8WVI7 109 aa0.77□□□□□ -2.29
AC025539.1-201ENST00000515343 CST11Q9H112 138 aa0.77□□□□□ -2.29
AC025539.1-201ENST00000515343 LHFPL6Q9Y693 200 aa0.77□□□□□ -2.29
AC025539.1-201ENST00000515343 A0A0J9YY99 117 aa0.77□□□□□ -2.29
AC025539.1-201ENST00000515343 TRBV30A0A0K0K1B3 111 aa0.77□□□□□ -2.29
AC025539.1-201ENST00000515343 C11orf86A6NJI1 115 aa0.77□□□□□ -2.29
AC025539.1-201ENST00000515343 IGKV1-17P01599 117 aa0.77□□□□□ -2.29
AC025539.1-201ENST00000515343 CTSGP08311 255 aa0.77□□□□□ -2.29
AC025539.1-201ENST00000515343 RBM3P98179 157 aaKnown RBP0.77□□□□□ -2.29
AC025539.1-201ENST00000515343 PDE6HQ13956 83 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms