RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 M0R143 59 aa7.4□□□□□ -1.22
PDLIM5-220ENST00000514830 BVES-AS1Q5T3Y7 98 aa7.4□□□□□ -1.22
PDLIM5-220ENST00000514830 FAM229AH3BQW9 127 aa7.39□□□□□ -1.23
PDLIM5-220ENST00000514830 KRTAP10-4P60372 401 aaPredicted RBP7.39□□□□□ -1.23
PDLIM5-220ENST00000514830 REG3GQ6UW15 175 aa7.39□□□□□ -1.23
PDLIM5-220ENST00000514830 TRAV23DV6A0A075B6W5 121 aa7.38□□□□□ -1.23
PDLIM5-220ENST00000514830 A6NDN8 102 aa7.38□□□□□ -1.23
PDLIM5-220ENST00000514830 KRTAP4-16G5E9R7 235 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-220ENST00000514830 SMR3BP02814 79 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-220ENST00000514830 OR13C6PQ8NH95 151 aa7.38□□□□□ -1.23
PDLIM5-220ENST00000514830 SRRM2Q9UQ35 2752 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-220ENST00000514830 H0Y9J4 135 aa7.37□□□□□ -1.23
PDLIM5-220ENST00000514830 BCE1O60756 84 aa7.37□□□□□ -1.23
PDLIM5-220ENST00000514830 PLA2G1BP04054 148 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-220ENST00000514830 RPL37AP61513 92 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-220ENST00000514830 RAB37Q96AX2 223 aa7.37□□□□□ -1.23
PDLIM5-220ENST00000514830 VPS13BQ7Z7G8 4022 aa7.37□□□□□ -1.23
PDLIM5-220ENST00000514830 TRBV7-6A0A0J9YX20 115 aa7.36□□□□□ -1.23
PDLIM5-220ENST00000514830 ZNF73O43830 326 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-220ENST00000514830 KRTAP13-1Q8IUC0 172 aa7.36□□□□□ -1.23
PDLIM5-220ENST00000514830 PRO1854Q9UHT4 67 aa7.36□□□□□ -1.23
PDLIM5-220ENST00000514830 RPL13AP40429 203 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-220ENST00000514830 HINT1P49773 126 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-220ENST00000514830 C1orf137Q5JT78 98 aa7.35□□□□□ -1.23
PDLIM5-220ENST00000514830 NHP2Q9NX24 153 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-220ENST00000514830 IGLV7-43P04211 117 aa7.34□□□□□ -1.23
PDLIM5-220ENST00000514830 RPL28P46779 137 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-220ENST00000514830 Q5VSD8 79 aa7.34□□□□□ -1.23
PDLIM5-220ENST00000514830 SMIM11BQ8TCY0 68 aa7.34□□□□□ -1.23
PDLIM5-220ENST00000514830 DIRC1Q969H9 104 aa7.33□□□□□ -1.24
PDLIM5-220ENST00000514830 ETDCA0A1B0GVM5 59 aa7.32□□□□□ -1.24
PDLIM5-220ENST00000514830 B5MCH6 92 aa7.32□□□□□ -1.24
PDLIM5-220ENST00000514830 J3QL48 77 aa7.32□□□□□ -1.24
PDLIM5-220ENST00000514830 C6orf99Q4VX62 202 aa7.32□□□□□ -1.24
PDLIM5-220ENST00000514830 Q6ZRX8 168 aa7.32□□□□□ -1.24
PDLIM5-220ENST00000514830 FAT1Q14517 4588 aa7.32□□□□□ -1.24
PDLIM5-220ENST00000514830 ZNF861PO60384 105 aa7.31□□□□□ -1.24
PDLIM5-220ENST00000514830 ELOF1P60002 83 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-220ENST00000514830 FAM19A1Q7Z5A9 133 aa7.31□□□□□ -1.24
PDLIM5-220ENST00000514830 K7ERJ3 54 aa7.3□□□□□ -1.24
PDLIM5-220ENST00000514830 UBE2AP49459 152 aa7.3□□□□□ -1.24
PDLIM5-220ENST00000514830 SPINK6Q6UWN8 80 aa7.3□□□□□ -1.24
PDLIM5-220ENST00000514830 HERC1Q15751 4861 aa7.3□□□□□ -1.24
PDLIM5-220ENST00000514830 VAMP3Q15836 100 aa7.29□□□□□ -1.24
PDLIM5-220ENST00000514830 LCE2CQ5TA81 110 aa7.29□□□□□ -1.24
PDLIM5-220ENST00000514830 COX7BP24311 80 aa7.28□□□□□ -1.24
PDLIM5-220ENST00000514830 FLG2Q5D862 2391 aaPredicted RBP7.27□□□□□ -1.24
PDLIM5-220ENST00000514830 H0YGX0 51 aa7.27□□□□□ -1.25
PDLIM5-220ENST00000514830 TSPAN13O95857 204 aa7.27□□□□□ -1.25
PDLIM5-220ENST00000514830 PRLHP81277 87 aa7.27□□□□□ -1.25
PDLIM5-220ENST00000514830 Q1RN00 199 aa7.27□□□□□ -1.25
PDLIM5-220ENST00000514830 Q9BRP9 147 aa7.27□□□□□ -1.25
PDLIM5-220ENST00000514830 SNHG12Q9BXW3 62 aa7.27□□□□□ -1.25
PDLIM5-220ENST00000514830 DHRS4-AS1Q9P1J3 65 aa7.27□□□□□ -1.25
PDLIM5-220ENST00000514830 PKHD1L1Q86WI1 4243 aa7.27□□□□□ -1.25
PDLIM5-220ENST00000514830 H7C2G1 150 aa7.26□□□□□ -1.25
PDLIM5-220ENST00000514830 SMCR5Q8TEV8 140 aa7.26□□□□□ -1.25
PDLIM5-220ENST00000514830 PCP4L1A6NKN8 68 aa7.25□□□□□ -1.25
PDLIM5-220ENST00000514830 TRIAP1O43715 76 aa7.25□□□□□ -1.25
PDLIM5-220ENST00000514830 BATFQ16520 125 aa7.25□□□□□ -1.25
PDLIM5-220ENST00000514830 LINC00575Q6W349 94 aa7.24□□□□□ -1.25
PDLIM5-220ENST00000514830 A0A1B0GX51 115 aa7.23□□□□□ -1.25
PDLIM5-220ENST00000514830 COX6CP09669 75 aa7.23□□□□□ -1.25
PDLIM5-220ENST00000514830 HIGD2AQ9BW72 106 aa7.23□□□□□ -1.25
PDLIM5-220ENST00000514830 COL5A1-AS1Q5SY13 56 aa7.22□□□□□ -1.25
PDLIM5-220ENST00000514830 TAX1BP3O14907 124 aa7.21□□□□□ -1.26
PDLIM5-220ENST00000514830 SLC25A20O43772 301 aa7.21□□□□□ -1.26
PDLIM5-220ENST00000514830 ERC2-IT1O76042 136 aa7.21□□□□□ -1.26
PDLIM5-220ENST00000514830 PSMB2P49721 201 aa7.21□□□□□ -1.26
PDLIM5-220ENST00000514830 ZNF706Q9Y5V0 76 aaPredicted RBP7.21□□□□□ -1.26
PDLIM5-220ENST00000514830 hADV29S1A0JD25 119 aa7.2□□□□□ -1.26
PDLIM5-220ENST00000514830 C9orf118A6NHY6 69 aa7.2□□□□□ -1.26
PDLIM5-220ENST00000514830 SNCGO76070 127 aa7.19□□□□□ -1.26
PDLIM5-220ENST00000514830 KRTAP1-4P0C5Y4 121 aa7.19□□□□□ -1.26
PDLIM5-220ENST00000514830 LINC00483Q53H64 154 aa7.19□□□□□ -1.26
PDLIM5-220ENST00000514830 SPRR4Q96PI1 79 aa7.19□□□□□ -1.26
PDLIM5-220ENST00000514830 IGLV5-48A0A075B6I7 105 aa7.18□□□□□ -1.26
PDLIM5-220ENST00000514830 SPRR1BP22528 89 aa7.18□□□□□ -1.26
PDLIM5-220ENST00000514830 FAM229BQ4G0N7 80 aa7.18□□□□□ -1.26
PDLIM5-220ENST00000514830 LYRM7Q5U5X0 104 aa7.18□□□□□ -1.26
PDLIM5-220ENST00000514830 FAM218AQ96MZ4 157 aa7.18□□□□□ -1.26
PDLIM5-220ENST00000514830 LORP23490 312 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-220ENST00000514830 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-220ENST00000514830 H3BUT2 72 aa7.16□□□□□ -1.26
PDLIM5-220ENST00000514830 LST1O00453 97 aa7.16□□□□□ -1.26
PDLIM5-220ENST00000514830 TRACP01848 142 aa7.16□□□□□ -1.26
PDLIM5-220ENST00000514830 SCGB1C2P0DMR2 95 aa7.16□□□□□ -1.26
PDLIM5-220ENST00000514830 OCIAD2Q56VL3 154 aa7.16□□□□□ -1.26
PDLIM5-220ENST00000514830 PPDPFLQ8WWR9 84 aa7.16□□□□□ -1.26
PDLIM5-220ENST00000514830 TRBV20-1A0A075B6N2 111 aa7.15□□□□□ -1.26
PDLIM5-220ENST00000514830 LINC01547P58512 204 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-220ENST00000514830 CLEC2BQ92478 149 aa7.15□□□□□ -1.26
PDLIM5-220ENST00000514830 A0A1W2PPM0 123 aa7.14□□□□□ -1.27
PDLIM5-220ENST00000514830 KRTAP29-1A8MX34 341 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-220ENST00000514830 OXTP01178 125 aa7.14□□□□□ -1.27
PDLIM5-220ENST00000514830 Q6ZQY7 126 aa7.14□□□□□ -1.27
PDLIM5-220ENST00000514830 ST20-AS1Q8NBB2 130 aa7.14□□□□□ -1.27
PDLIM5-220ENST00000514830 LINC01600Q96MT4 127 aa7.14□□□□□ -1.27
PDLIM5-220ENST00000514830 NAA38Q9BRA0 125 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-220ENST00000514830 LOC100996750A0A140TA64 210 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms