RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 C1orf137Q5JT78 98 aa4.36□□□□□ -1.71
SMAD1-213ENST00000514778 KCNQ1DNQ9H478 68 aa4.36□□□□□ -1.71
SMAD1-213ENST00000514778 HIGD1BQ9P298 99 aa4.36□□□□□ -1.71
SMAD1-213ENST00000514778 H0Y9J4 135 aa4.35□□□□□ -1.71
SMAD1-213ENST00000514778 PRYO14603 147 aa4.35□□□□□ -1.71
SMAD1-213ENST00000514778 IGLV6-57P01721 117 aa4.35□□□□□ -1.71
SMAD1-213ENST00000514778 REG3GQ6UW15 175 aa4.35□□□□□ -1.71
SMAD1-213ENST00000514778 SOSTDC1Q6X4U4 206 aa4.35□□□□□ -1.71
SMAD1-213ENST00000514778 KRTAP11-1Q8IUC1 163 aa4.35□□□□□ -1.71
SMAD1-213ENST00000514778 Q8NDZ9 215 aa4.35□□□□□ -1.71
SMAD1-213ENST00000514778 C12orf57Q99622 126 aa4.35□□□□□ -1.71
SMAD1-213ENST00000514778 SRRM2Q9UQ35 2752 aaKnown RBP4.35□□□□□ -1.71
SMAD1-213ENST00000514778 RYR1P21817 5038 aa4.34□□□□□ -1.71
SMAD1-213ENST00000514778 IGKV2-28A0A075B6P5 120 aa4.34□□□□□ -1.71
SMAD1-213ENST00000514778 GAGE10A6NGK3 116 aa4.34□□□□□ -1.71
SMAD1-213ENST00000514778 RPL37AP8A6NKH3 93 aa4.34□□□□□ -1.71
SMAD1-213ENST00000514778 ZNF861PO60384 105 aa4.34□□□□□ -1.71
SMAD1-213ENST00000514778 OXTP01178 125 aa4.34□□□□□ -1.71
SMAD1-213ENST00000514778 IGKV2D-28P01615 120 aa4.34□□□□□ -1.71
SMAD1-213ENST00000514778 SPRR1AP35321 89 aa4.34□□□□□ -1.71
SMAD1-213ENST00000514778 RPL28P46779 137 aaKnown RBP4.34□□□□□ -1.71
SMAD1-213ENST00000514778 SLC25A34Q6PIV7 304 aa4.34□□□□□ -1.71
SMAD1-213ENST00000514778 LINC00337Q8N6G1 96 aa4.34□□□□□ -1.71
SMAD1-213ENST00000514778 DIRC1Q969H9 104 aa4.34□□□□□ -1.71
SMAD1-213ENST00000514778 TMEM126AQ9H061 195 aa4.34□□□□□ -1.71
SMAD1-213ENST00000514778 HERC2O95714 4834 aa4.33□□□□□ -1.72
SMAD1-213ENST00000514778 DDTP30046 118 aa4.33□□□□□ -1.72
SMAD1-213ENST00000514778 S100A7L2Q5SY68 101 aa4.33□□□□□ -1.72
SMAD1-213ENST00000514778 MUSTN1Q8IVN3 82 aa4.33□□□□□ -1.72
SMAD1-213ENST00000514778 TRBV10-3A0A0K0K1G6 114 aa4.32□□□□□ -1.72
SMAD1-213ENST00000514778 KRTAP29-1A8MX34 341 aaPredicted RBP4.32□□□□□ -1.72
SMAD1-213ENST00000514778 NCR3O14931 201 aa4.32□□□□□ -1.72
SMAD1-213ENST00000514778 HNRNPA3P51991 378 aaKnown RBP4.32□□□□□ -1.72
SMAD1-213ENST00000514778 NPC2P61916 151 aa4.32□□□□□ -1.72
SMAD1-213ENST00000514778 TAL2Q16559 108 aa4.32□□□□□ -1.72
SMAD1-213ENST00000514778 KRTAP13-1Q8IUC0 172 aa4.32□□□□□ -1.72
SMAD1-213ENST00000514778 C14orf144Q96I85 54 aa4.32□□□□□ -1.72
SMAD1-213ENST00000514778 TRAV23DV6A0A075B6W5 121 aa4.31□□□□□ -1.72
SMAD1-213ENST00000514778 TRAV13-2A0A0B4J235 113 aa4.31□□□□□ -1.72
SMAD1-213ENST00000514778 KRTAP4-16G5E9R7 235 aaPredicted RBP4.31□□□□□ -1.72
SMAD1-213ENST00000514778 TSTD3H0UI37 97 aa4.31□□□□□ -1.72
SMAD1-213ENST00000514778 UBE2AP49459 152 aa4.31□□□□□ -1.72
SMAD1-213ENST00000514778 HIST1H4GQ99525 98 aa4.31□□□□□ -1.72
SMAD1-213ENST00000514778 TRBV7-6A0A0J9YX20 115 aa4.3□□□□□ -1.72
SMAD1-213ENST00000514778 HINT1P49773 126 aaPredicted RBP4.3□□□□□ -1.72
SMAD1-213ENST00000514778 C2orf91Q6ZV80 131 aa4.3□□□□□ -1.72
SMAD1-213ENST00000514778 FAM19A1Q7Z5A9 133 aa4.3□□□□□ -1.72
SMAD1-213ENST00000514778 LINC01600Q96MT4 127 aa4.3□□□□□ -1.72
SMAD1-213ENST00000514778 UQCR10Q9UDW1 63 aa4.3□□□□□ -1.72
SMAD1-213ENST00000514778 FAT1Q14517 4588 aa4.3□□□□□ -1.72
SMAD1-213ENST00000514778 VPS13BQ7Z7G8 4022 aa4.3□□□□□ -1.72
SMAD1-213ENST00000514778 ETDCA0A1B0GVM5 59 aa4.29□□□□□ -1.72
SMAD1-213ENST00000514778 A4D1N5 150 aa4.29□□□□□ -1.72
SMAD1-213ENST00000514778 ZNF73O43830 326 aaPredicted RBP4.29□□□□□ -1.72
SMAD1-213ENST00000514778 OR13C6PQ8NH95 151 aa4.29□□□□□ -1.72
SMAD1-213ENST00000514778 PRO1933Q9H354 126 aa4.29□□□□□ -1.72
SMAD1-213ENST00000514778 A6NDN8 102 aa4.28□□□□□ -1.72
SMAD1-213ENST00000514778 B5MCH6 92 aa4.28□□□□□ -1.72
SMAD1-213ENST00000514778 Q6ZRX8 168 aa4.28□□□□□ -1.72
SMAD1-213ENST00000514778 ZNF706Q9Y5V0 76 aaPredicted RBP4.28□□□□□ -1.72
SMAD1-213ENST00000514778 HSD52Q0P140 79 aa4.27□□□□□ -1.73
SMAD1-213ENST00000514778 FAM229BQ4G0N7 80 aa4.27□□□□□ -1.73
SMAD1-213ENST00000514778 CEND1Q8N111 149 aa4.27□□□□□ -1.73
SMAD1-213ENST00000514778 A0A0B4J2C4 111 aa4.26□□□□□ -1.73
SMAD1-213ENST00000514778 A0A1B0GWB2 263 aa4.26□□□□□ -1.73
SMAD1-213ENST00000514778 RPL13AP40429 203 aaKnown RBP4.26□□□□□ -1.73
SMAD1-213ENST00000514778 PRLHP81277 87 aa4.26□□□□□ -1.73
SMAD1-213ENST00000514778 VAMP3Q15836 100 aa4.26□□□□□ -1.73
SMAD1-213ENST00000514778 DHRS4-AS1Q9P1J3 65 aa4.26□□□□□ -1.73
SMAD1-213ENST00000514778 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
SMAD1-213ENST00000514778 KRTAP1-4P0C5Y4 121 aa4.25□□□□□ -1.73
SMAD1-213ENST00000514778 COX7BP24311 80 aa4.25□□□□□ -1.73
SMAD1-213ENST00000514778 ELOF1P60002 83 aaKnown RBP4.25□□□□□ -1.73
SMAD1-213ENST00000514778 KRTAP10-8P60410 259 aa4.25□□□□□ -1.73
SMAD1-213ENST00000514778 C6orf99Q4VX62 202 aa4.25□□□□□ -1.73
SMAD1-213ENST00000514778 HIGD2AQ9BW72 106 aa4.25□□□□□ -1.73
SMAD1-213ENST00000514778 NHP2Q9NX24 153 aaKnown RBP4.25□□□□□ -1.73
SMAD1-213ENST00000514778 CFC1BP0CG36 223 aa4.24□□□□□ -1.73
SMAD1-213ENST00000514778 CFC1P0CG37 223 aa4.24□□□□□ -1.73
SMAD1-213ENST00000514778 CRYGAP11844 174 aa4.24□□□□□ -1.73
SMAD1-213ENST00000514778 BVES-AS1Q5T3Y7 98 aa4.24□□□□□ -1.73
SMAD1-213ENST00000514778 SMIM11BQ8TCY0 68 aa4.24□□□□□ -1.73
SMAD1-213ENST00000514778 SMCR5Q8TEV8 140 aa4.24□□□□□ -1.73
SMAD1-213ENST00000514778 RAB37Q96AX2 223 aa4.24□□□□□ -1.73
SMAD1-213ENST00000514778 Q9BRP9 147 aa4.24□□□□□ -1.73
SMAD1-213ENST00000514778 PRO1854Q9UHT4 67 aa4.24□□□□□ -1.73
SMAD1-213ENST00000514778 MT1HL1P0DM35 61 aa4.23□□□□□ -1.73
SMAD1-213ENST00000514778 LINC00483Q53H64 154 aa4.23□□□□□ -1.73
SMAD1-213ENST00000514778 SPRR4Q96PI1 79 aa4.23□□□□□ -1.73
SMAD1-213ENST00000514778 PCP4L1A6NKN8 68 aa4.22□□□□□ -1.73
SMAD1-213ENST00000514778 M0R143 59 aa4.22□□□□□ -1.73
SMAD1-213ENST00000514778 SLC25A20O43772 301 aa4.22□□□□□ -1.73
SMAD1-213ENST00000514778 H0YGX0 51 aa4.21□□□□□ -1.74
SMAD1-213ENST00000514778 SNCGO76070 127 aa4.21□□□□□ -1.74
SMAD1-213ENST00000514778 SPRR1BP22528 89 aa4.21□□□□□ -1.74
SMAD1-213ENST00000514778 FXYD2P54710 66 aa4.21□□□□□ -1.74
SMAD1-213ENST00000514778 A0A1B0GX51 115 aa4.2□□□□□ -1.74
SMAD1-213ENST00000514778 ERC2-IT1O76042 136 aa4.2□□□□□ -1.74
SMAD1-213ENST00000514778 PCP4P48539 62 aa4.2□□□□□ -1.74
SMAD1-213ENST00000514778 LINC00575Q6W349 94 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms