RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 C1orf137Q5JT78 98 aa1.91□□□□□ -2.1
RFC1-216ENST00000514572 TOMM5Q8N4H5 51 aa1.91□□□□□ -2.1
RFC1-216ENST00000514572 Q8TAT8 98 aa1.91□□□□□ -2.1
RFC1-216ENST00000514572 MGST2Q99735 147 aa1.91□□□□□ -2.1
RFC1-216ENST00000514572 NAA38Q9BRA0 125 aaKnown RBP1.91□□□□□ -2.1
RFC1-216ENST00000514572 NMES1Q9C002 83 aa1.91□□□□□ -2.1
RFC1-216ENST00000514572 TMEM262E9PQX1 116 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 K7ERJ3 54 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 HIST1H2BKO60814 126 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 PFDN1O60925 122 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 ANGP03950 147 aaKnown RBP1.9□□□□□ -2.11
RFC1-216ENST00000514572 HIST1H2BJP06899 126 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 PYYP10082 97 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 BCL2P10415 239 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 S100A10P60903 97 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 RAB4BP61018 213 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 MIC13Q5XKP0 118 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 SPINK6Q6UWN8 80 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 UNQ6190/PRO20217Q6UXQ8 127 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.9□□□□□ -2.11
RFC1-216ENST00000514572 RETNLBQ9BQ08 111 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 MED9Q9NWA0 146 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 GSKIPQ9P0R6 139 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 NAT8BQ9UHF3 227 aa1.9□□□□□ -2.11
RFC1-216ENST00000514572 FSIP2Q5CZC0 6907 aa1.89□□□□□ -2.11
RFC1-216ENST00000514572 TRBV10-1A0A0K0K1A3 114 aa1.89□□□□□ -2.11
RFC1-216ENST00000514572 UBE2L5PA0A1B0GUS4 154 aa1.89□□□□□ -2.11
RFC1-216ENST00000514572 C9orf170A2RU37 121 aa1.89□□□□□ -2.11
RFC1-216ENST00000514572 C17orf112F2Z3M2 114 aa1.89□□□□□ -2.11
RFC1-216ENST00000514572 CST7O76096 145 aa1.89□□□□□ -2.11
RFC1-216ENST00000514572 LINC00694P0DN24 101 aa1.89□□□□□ -2.11
RFC1-216ENST00000514572 FGF7P21781 194 aa1.89□□□□□ -2.11
RFC1-216ENST00000514572 UBE2L3P68036 154 aaKnown RBP1.89□□□□□ -2.11
RFC1-216ENST00000514572 OR2T35Q8NGX2 323 aa1.89□□□□□ -2.11
RFC1-216ENST00000514572 HYLS1Q96M11 299 aa1.89□□□□□ -2.11
RFC1-216ENST00000514572 PLAC8Q9NZF1 115 aa1.89□□□□□ -2.11
RFC1-216ENST00000514572 LINC00474Q9P2X8 69 aa1.89□□□□□ -2.11
RFC1-216ENST00000514572 LAMTOR2Q9Y2Q5 125 aa1.89□□□□□ -2.11
RFC1-216ENST00000514572 LPAP08519 4548 aa1.89□□□□□ -2.11
RFC1-216ENST00000514572 TRBV7-3A0A075B6L6 115 aa1.88□□□□□ -2.11
RFC1-216ENST00000514572 A0A087WSZ3 146 aa1.88□□□□□ -2.11
RFC1-216ENST00000514572 TRBV6-8A0A0A6YYG3 113 aa1.88□□□□□ -2.11
RFC1-216ENST00000514572 NAP1L6A6NFF2 107 aa1.88□□□□□ -2.11
RFC1-216ENST00000514572 TSTD3H0UI37 97 aa1.88□□□□□ -2.11
RFC1-216ENST00000514572 KRTAP26-1Q6PEX3 210 aa1.88□□□□□ -2.11
RFC1-216ENST00000514572 ENHOQ6UWT2 76 aa1.88□□□□□ -2.11
RFC1-216ENST00000514572 FAM167A-AS1Q96KT0 104 aa1.88□□□□□ -2.11
RFC1-216ENST00000514572 IGKV2D-26A0A0A0MRZ7 120 aa1.87□□□□□ -2.11
RFC1-216ENST00000514572 F6UZH7 168 aa1.87□□□□□ -2.11
RFC1-216ENST00000514572 NDUFB6O95139 128 aa1.87□□□□□ -2.11
RFC1-216ENST00000514572 RPL35P42766 123 aaKnown RBP1.87□□□□□ -2.11
RFC1-216ENST00000514572 UBE2D3P61077 147 aa1.87□□□□□ -2.11
RFC1-216ENST00000514572 UBE2D2P62837 147 aa1.87□□□□□ -2.11
RFC1-216ENST00000514572 FAM74A4Q5TZK3 123 aa1.87□□□□□ -2.11
RFC1-216ENST00000514572 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
RFC1-216ENST00000514572 HRCT1Q6UXD1 115 aa1.87□□□□□ -2.11
RFC1-216ENST00000514572 LINC00269Q8N2A0 174 aa1.87□□□□□ -2.11
RFC1-216ENST00000514572 CHCHD1Q96BP2 118 aaKnown RBP1.87□□□□□ -2.11
RFC1-216ENST00000514572 TRBV25-1A0A075B6N4 114 aa1.86□□□□□ -2.11
RFC1-216ENST00000514572 FAM24AA6NFZ4 105 aa1.86□□□□□ -2.11
RFC1-216ENST00000514572 TPT1P13693 172 aaKnown RBP1.86□□□□□ -2.11
RFC1-216ENST00000514572 RPS28P62857 69 aaKnown RBP1.86□□□□□ -2.11
RFC1-216ENST00000514572 COX6A2Q02221 97 aa1.86□□□□□ -2.11
RFC1-216ENST00000514572 SPCS2Q15005 226 aa1.86□□□□□ -2.11
RFC1-216ENST00000514572 C5orf17Q8NAS9 161 aa1.86□□□□□ -2.11
RFC1-216ENST00000514572 HSPB11Q9Y547 144 aa1.86□□□□□ -2.11
RFC1-216ENST00000514572 IGHV1-24A0A0C4DH33 117 aa1.85□□□□□ -2.11
RFC1-216ENST00000514572 IGHV1-58A0A0C4DH39 117 aa1.85□□□□□ -2.11
RFC1-216ENST00000514572 LOC105371267A0A1B0GV96 52 aa1.85□□□□□ -2.11
RFC1-216ENST00000514572 H3BVH4 76 aa1.85□□□□□ -2.11
RFC1-216ENST00000514572 MT-ND6P03923 174 aa1.85□□□□□ -2.11
RFC1-216ENST00000514572 TCRAP04437 139 aa1.85□□□□□ -2.11
RFC1-216ENST00000514572 RAB5CP51148 216 aa1.85□□□□□ -2.11
RFC1-216ENST00000514572 ZNF56Q15929 161 aa1.85□□□□□ -2.11
RFC1-216ENST00000514572 CLPSL2Q6UWE3 100 aa1.85□□□□□ -2.11
RFC1-216ENST00000514572 TMEM254Q8TBM7 123 aa1.85□□□□□ -2.11
RFC1-216ENST00000514572 DIRC1Q969H9 104 aa1.85□□□□□ -2.11
RFC1-216ENST00000514572 TRBV6-1A0A0K0K1D8 114 aa1.84□□□□□ -2.11
RFC1-216ENST00000514572 ARMS2P0C7Q2 107 aa1.84□□□□□ -2.11
RFC1-216ENST00000514572 UBE2D1P51668 147 aa1.84□□□□□ -2.11
RFC1-216ENST00000514572 IQCJQ1A5X6 159 aa1.84□□□□□ -2.11
RFC1-216ENST00000514572 TSKUQ8WUA8 353 aa1.84□□□□□ -2.11
RFC1-216ENST00000514572 TMEM167BQ9NRX6 74 aa1.84□□□□□ -2.11
RFC1-216ENST00000514572 ZFP30Q9Y2G7 519 aa1.84□□□□□ -2.11
RFC1-216ENST00000514572 V9GYH0 126 aa1.84□□□□□ -2.11
RFC1-216ENST00000514572 LOC110117498A0A087WWA1 95 aa1.83□□□□□ -2.12
RFC1-216ENST00000514572 A0A096LNI7 61 aa1.83□□□□□ -2.12
RFC1-216ENST00000514572 GVQW2A0A096LPI5 108 aaPredicted RBP1.83□□□□□ -2.12
RFC1-216ENST00000514572 ARL14EPLP0DKL9 152 aa1.83□□□□□ -2.12
RFC1-216ENST00000514572 SPANXN1Q5VSR9 72 aa1.83□□□□□ -2.12
RFC1-216ENST00000514572 AQP10Q96PS8 301 aa1.83□□□□□ -2.12
RFC1-216ENST00000514572 ARL2-SNX15V9GYD0 113 aa1.83□□□□□ -2.12
RFC1-216ENST00000514572 TRBV7-6A0A0J9YX20 115 aa1.82□□□□□ -2.12
RFC1-216ENST00000514572 LOC107984640A0A0U1RRK4 108 aa1.82□□□□□ -2.12
RFC1-216ENST00000514572 CCDC160A6NGH7 325 aa1.82□□□□□ -2.12
RFC1-216ENST00000514572 LYRM1O43325 122 aa1.82□□□□□ -2.12
RFC1-216ENST00000514572 GCHFRP30047 84 aa1.82□□□□□ -2.12
RFC1-216ENST00000514572 UBE2G1P62253 170 aa1.82□□□□□ -2.12
RFC1-216ENST00000514572 AP1S3Q96PC3 154 aa1.82□□□□□ -2.12
RFC1-216ENST00000514572 TCEAL7Q9BRU2 100 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms